Click here to switch to the map view.

The map label for this gene is 17547966

Identifier: 17547966

GI number: 17547966

Start: 3505182

End: 3505550

Strand: Direct

Name: 17547966

Synonym: RSc3249

Alternate gene names: NA

Gene position: 3505182-3505550 (Clockwise)

Preceding gene: 17547965

Following gene: 17547967

Centisome position: 94.32

GC content: 55.83

Gene sequence:

>369_bases
ATGAGTTCCACACTGGCTTGGGGAATTGCGTTGGCTGTTGCGACTGTGTTCGCAACGCCCTCCGCTCAGGCGGTATGCTA
TGGCTCGTCGAACATGTACACATGCTCTGACAGTTCCGGCAACTCGTACAACGTGAACCGCTTCGGCACCACCACCACGG
TAAACGGCTACAACGCACAAACTGGCTCGTCTTGGAGCCAAACTTCCCAGCACTACGGCAACACAACTTACACGCAAGGC
CAAGCCGCGAATGGCAATAGCTGGAACAGCACCACGCAGAGTTATGGGAACGGGTATACCAACACCTACGGGACCGACTC
TCATGGCCGGAGCTTCAACCGGCAGTGTGGGCCATATGGTTGTTACTAG

Upstream 100 bases:

>100_bases
TAGATATCTTTTTTATGCCACGCATTACCTCCTTTGACGACTTATCAAGTACAGCAGCTCATGCTAATGTTTTTAGATAA
AGACACTGCTGGGAGGGGAT

Downstream 100 bases:

>100_bases
CTCCAACAGCCATTCTGCGATCTAGGGAGCATGCTCATGCGGCTACTCGCTCAGAGCCTTATCGCCGCCCTGCTTGCCGC
AACCAGTACGAGCATTTATG

Product: signal peptide protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MSSTLAWGIALAVATVFATPSAQAVCYGSSNMYTCSDSSGNSYNVNRFGTTTTVNGYNAQTGSSWSQTSQHYGNTTYTQG
QAANGNSWNSTTQSYGNGYTNTYGTDSHGRSFNRQCGPYGCY

Sequences:

>Translated_122_residues
MSSTLAWGIALAVATVFATPSAQAVCYGSSNMYTCSDSSGNSYNVNRFGTTTTVNGYNAQTGSSWSQTSQHYGNTTYTQG
QAANGNSWNSTTQSYGNGYTNTYGTDSHGRSFNRQCGPYGCY
>Mature_121_residues
SSTLAWGIALAVATVFATPSAQAVCYGSSNMYTCSDSSGNSYNVNRFGTTTTVNGYNAQTGSSWSQTSQHYGNTTYTQGQ
AANGNSWNSTTQSYGNGYTNTYGTDSHGRSFNRQCGPYGCY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12953; Mature: 12822

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTLAWGIALAVATVFATPSAQAVCYGSSNMYTCSDSSGNSYNVNRFGTTTTVNGYNAQ
CCCCHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCCEEECCCCCCEEEECCCCCC
TGSSWSQTSQHYGNTTYTQGQAANGNSWNSTTQSYGNGYTNTYGTDSHGRSFNRQCGPYG
CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCC
CY
CC
>Mature Secondary Structure 
SSTLAWGIALAVATVFATPSAQAVCYGSSNMYTCSDSSGNSYNVNRFGTTTTVNGYNAQ
CCCHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCCEEECCCCCCEEEECCCCCC
TGSSWSQTSQHYGNTTYTQGQAANGNSWNSTTQSYGNGYTNTYGTDSHGRSFNRQCGPYG
CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCC
CY
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA