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The map label for this gene is 17547948

Identifier: 17547948

GI number: 17547948

Start: 3488036

End: 3490315

Strand: Reverse

Name: 17547948

Synonym: RSc3229

Alternate gene names: NA

Gene position: 3490315-3488036 (Counterclockwise)

Preceding gene: 17547949

Following gene: 17547947

Centisome position: 93.92

GC content: 68.73

Gene sequence:

>2280_bases
ATGATCGACTTCAACGAGATCCCGCTGGTGACTGGCCAACTGGACGCCCAGCGCGACGAGATCCGCGCGGCGCTGCTCGC
CCGCCTGGAATTCGTGCTGAGCGTGCTGTTCCCGGCCGGCAAGAAGCGACGCGGCACGTTCGTGGTCGGCGACATCCTGG
GCAGCCCCGGCGACAGCCTGGAGGTGGTGCTCGACGGCGAGAAGGCGGGCCTGTGGACGGATCGCGCGACCGGCGACGGC
GGCGACATCTTCGATCTGATCGCGGCCCAGGCTGGCCTGCGCGTGTCCACGGACTTCAGCGGAGTGCTCGAACGCGCCTT
GCAACTGCTCGGCCAAGCCAGCAAGCAGCCGGTGCGGCGTAAGCGCCGGGAGCCACCGACGGACGACCTCGGCCCTGAGA
CGGCCAAGTGGGACTACCTGGACGCCGCCGGCAAGCTAATCGGGGTGGTGTACCGCTACGACCCTCCCGGCCGCGGCAAG
GAGTTCCGGCCGTGGGATGCCAAGCGCCGCAAGATGGCCCCGCCCGAGCCGCGCCCGCTGTACAACCAGCCGGGCCTGGC
GACCGCCACGCAGGTCGTGCTGGTCGAGGGCGAGAAATGCGCCCAGGCCCTGATCGACATCGGCATTGTTGCGACCACGG
CCATGCACGGTGCGAACGCGCCGGTCGAGAAGACCGACTGGTCGCCGCTGGCCGGCAAGGCCGTGCTGATCTGGCCCGAC
CGGGACAAGCCGGGCTGGGAGTACGCCGCCAACGCGGCTCAGGCCATTCTGTCGGCGGGCGCGACGACTTGCCACATCCT
GTACCCGCCCGAGGAAGCGGGCGAAGGGTGGGATGCGGCGGACGCCGTGGCCGAGGGCTTCGACATTGCCGCCTTCATCG
CCCATGGCCCGCGCCTGCAGATGCACGATGTCGTCGACGATCCGGAGCCGGTCATCGGCAGCGACGAGTCGGTGTGGGGT
ACCGAGGACGCACTGGCACTGGCTTTCACCCGCCGCTACCACCGCGACTGGCGTTACGTCGCCGCGTGGGGCCGCTGGCT
GGTGTGGGACGGCCACCGTTGGCGCACCGAGGACACGCTGGCGGCCACGGACCTGATCCGCAACGTCTGCCGGCACGCCG
CCTTGCACGCCGAGAACCCGAGGCTCGCCGCCAAGCTGGCCACCTCCGGCACCATCGCCGGCGTGGAGCGGCTGGCGCGC
GCGGATCGCCGACATGCGGCCACCACCAGCGAGTGGGACGCCGACCCGTGGTTGCTCAACACGCCCGGCGGCGTGGTCGA
CCTCAGAACCGGCCGGCAGCGTCCGCACGACCGGGATGATCGGATGACCAAGATCACCACGGCCACGCCTGTGGGCGACT
GCCCGACCTGGCGGCAGTTTCTCGCCGAAGTGACGGGCGGCGACGTCGAGCTGCAAGCCTACCTGCAACGGATGGCGGGC
TACGCGCTGACCGGGTCGACGCAGGAGCATGCGCTGTTCTTCCTGTACGGCACGGGCGCGAACGGCAAGTCGGTGTTCGT
CAACACGCTGGCCACGATCCTGGGCGACTACGCGGCCAACGCGGCGATGGACACGTTCATGGAAACGCGCGCCGACCGGC
ATCCGACCGACATGGCGGGGCTGCGCGGTGCACGCTTCGTGGCGGCCATCGAGACCGAACAGGGACGGCGCTGGGCGGAA
TCCAAGGTCAAGAACCTCACCGGTGGCGACAAGATCTCCGCGCGCTTCATGCGGCAAGACTTCTTCGAGTTCTTCCCGCA
GTTCAAGCTGTTCGTCGCTGGCAACCACAAACCGGCCATCCGCAACATCGACGAGGCAATGAAGCGGCGACTGCATCTGA
TTCCGTTCACGGTGACCGTGCCCCCGGAGCGTCGCGACAAACACCTCCAACAGAAGCTGCTGGCCGAGCGCGACGGGATC
CTGGCGTGGGCTGTTCAGGGCTGCCTCGACTGGCAGCGGCTGGGCCGGCTCGATCCGCCGCAACAGGTGCTGGATGCGAC
TGAAGAGTACTTCGAGGCAGAAGACGCGCTGGGTCGCTGGCTGGACGAACGCTGCGTGCGCGAGGCCAACGCCAAGTCGC
TGACCGCCGAGTTGTTCAACGACTGGAAGCAGTGGGCCGAGGCCGCTGGCGAGTTTGCGGGATCGCAAAAGCGGTTTGCC
GATTTGCTCCTCACCCGTGGCGTCGAGAAATGGCGCAACACGGCCGGTCTGCGCGGCTTCCGTGGCGTGGGCCTCAAACA
CCCGGCCGCGCCCGCCTACACCCCATACGCGGACACCTGA

Upstream 100 bases:

>100_bases
TGCGCTTCCGCCTGTCCGAGCTCACGGCCTGGTTGGCGAACGCCGCGCTGCAGCCGCGCGAGACAGCTCCGGCCGCCGGC
ATGCCGGGGGAGGGCGCGCA

Downstream 100 bases:

>100_bases
GCGCCACGTCGACACATCCGACCGACGGATCGGACGGACTACGTCGTAACTCTTACGCGTGCGCGTACGCGCGCACACCT
CATGGGGAGTTTCGATGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Phage/Plasmid Primase P4 Family; DNA Primase/Helicase; Phage Related Protein; Primase; Phage DNA Polymerase; Phage/Plasmid Primase; Phage Primase; TOPRIM Domain-Containing Protein; Regulatory Protein RepA; Bacteriophage-Related Protein; Phage-Like Protein; Nucleoside Triphosphatase D5 Family; Phage-Associated Protein; Phage/Plasmid DNA Primase; DNA Primase; Phage/Plasmid Primase P4-Like; Phage DNA Primase; Phage/Plasmid Primase P4 C-Terminal Protein; DNA-Polymerase Or DNA-Primase; Bacteriophage Related Protein; Prophage; Plasmid/Phage Primase; Bacteriophage Protein; Primase P4-Like Protein; Inner Membrane Protein; DNA/RNA Helicase; Prim Domain Protein; Phage Or Plasmid Primase P4-Like; D5 N-Terminal Domain Family Protein; Phage Associated DNA Primase; TOPRIM Domain Protein; DNA Primase Phage/Plasmid; Phage/Plasmid Primase P4-Like Protein

Number of amino acids: Translated: 759; Mature: 759

Protein sequence:

>759_residues
MIDFNEIPLVTGQLDAQRDEIRAALLARLEFVLSVLFPAGKKRRGTFVVGDILGSPGDSLEVVLDGEKAGLWTDRATGDG
GDIFDLIAAQAGLRVSTDFSGVLERALQLLGQASKQPVRRKRREPPTDDLGPETAKWDYLDAAGKLIGVVYRYDPPGRGK
EFRPWDAKRRKMAPPEPRPLYNQPGLATATQVVLVEGEKCAQALIDIGIVATTAMHGANAPVEKTDWSPLAGKAVLIWPD
RDKPGWEYAANAAQAILSAGATTCHILYPPEEAGEGWDAADAVAEGFDIAAFIAHGPRLQMHDVVDDPEPVIGSDESVWG
TEDALALAFTRRYHRDWRYVAAWGRWLVWDGHRWRTEDTLAATDLIRNVCRHAALHAENPRLAAKLATSGTIAGVERLAR
ADRRHAATTSEWDADPWLLNTPGGVVDLRTGRQRPHDRDDRMTKITTATPVGDCPTWRQFLAEVTGGDVELQAYLQRMAG
YALTGSTQEHALFFLYGTGANGKSVFVNTLATILGDYAANAAMDTFMETRADRHPTDMAGLRGARFVAAIETEQGRRWAE
SKVKNLTGGDKISARFMRQDFFEFFPQFKLFVAGNHKPAIRNIDEAMKRRLHLIPFTVTVPPERRDKHLQQKLLAERDGI
LAWAVQGCLDWQRLGRLDPPQQVLDATEEYFEAEDALGRWLDERCVREANAKSLTAELFNDWKQWAEAAGEFAGSQKRFA
DLLLTRGVEKWRNTAGLRGFRGVGLKHPAAPAYTPYADT

Sequences:

>Translated_759_residues
MIDFNEIPLVTGQLDAQRDEIRAALLARLEFVLSVLFPAGKKRRGTFVVGDILGSPGDSLEVVLDGEKAGLWTDRATGDG
GDIFDLIAAQAGLRVSTDFSGVLERALQLLGQASKQPVRRKRREPPTDDLGPETAKWDYLDAAGKLIGVVYRYDPPGRGK
EFRPWDAKRRKMAPPEPRPLYNQPGLATATQVVLVEGEKCAQALIDIGIVATTAMHGANAPVEKTDWSPLAGKAVLIWPD
RDKPGWEYAANAAQAILSAGATTCHILYPPEEAGEGWDAADAVAEGFDIAAFIAHGPRLQMHDVVDDPEPVIGSDESVWG
TEDALALAFTRRYHRDWRYVAAWGRWLVWDGHRWRTEDTLAATDLIRNVCRHAALHAENPRLAAKLATSGTIAGVERLAR
ADRRHAATTSEWDADPWLLNTPGGVVDLRTGRQRPHDRDDRMTKITTATPVGDCPTWRQFLAEVTGGDVELQAYLQRMAG
YALTGSTQEHALFFLYGTGANGKSVFVNTLATILGDYAANAAMDTFMETRADRHPTDMAGLRGARFVAAIETEQGRRWAE
SKVKNLTGGDKISARFMRQDFFEFFPQFKLFVAGNHKPAIRNIDEAMKRRLHLIPFTVTVPPERRDKHLQQKLLAERDGI
LAWAVQGCLDWQRLGRLDPPQQVLDATEEYFEAEDALGRWLDERCVREANAKSLTAELFNDWKQWAEAAGEFAGSQKRFA
DLLLTRGVEKWRNTAGLRGFRGVGLKHPAAPAYTPYADT
>Mature_759_residues
MIDFNEIPLVTGQLDAQRDEIRAALLARLEFVLSVLFPAGKKRRGTFVVGDILGSPGDSLEVVLDGEKAGLWTDRATGDG
GDIFDLIAAQAGLRVSTDFSGVLERALQLLGQASKQPVRRKRREPPTDDLGPETAKWDYLDAAGKLIGVVYRYDPPGRGK
EFRPWDAKRRKMAPPEPRPLYNQPGLATATQVVLVEGEKCAQALIDIGIVATTAMHGANAPVEKTDWSPLAGKAVLIWPD
RDKPGWEYAANAAQAILSAGATTCHILYPPEEAGEGWDAADAVAEGFDIAAFIAHGPRLQMHDVVDDPEPVIGSDESVWG
TEDALALAFTRRYHRDWRYVAAWGRWLVWDGHRWRTEDTLAATDLIRNVCRHAALHAENPRLAAKLATSGTIAGVERLAR
ADRRHAATTSEWDADPWLLNTPGGVVDLRTGRQRPHDRDDRMTKITTATPVGDCPTWRQFLAEVTGGDVELQAYLQRMAG
YALTGSTQEHALFFLYGTGANGKSVFVNTLATILGDYAANAAMDTFMETRADRHPTDMAGLRGARFVAAIETEQGRRWAE
SKVKNLTGGDKISARFMRQDFFEFFPQFKLFVAGNHKPAIRNIDEAMKRRLHLIPFTVTVPPERRDKHLQQKLLAERDGI
LAWAVQGCLDWQRLGRLDPPQQVLDATEEYFEAEDALGRWLDERCVREANAKSLTAELFNDWKQWAEAAGEFAGSQKRFA
DLLLTRGVEKWRNTAGLRGFRGVGLKHPAAPAYTPYADT

Specific function: Unknown

COG id: COG3378

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84086; Mature: 84086

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDFNEIPLVTGQLDAQRDEIRAALLARLEFVLSVLFPAGKKRRGTFVVGDILGSPGDSL
CCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCE
EVVLDGEKAGLWTDRATGDGGDIFDLIAAQAGLRVSTDFSGVLERALQLLGQASKQPVRR
EEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHCCHHHH
KRREPPTDDLGPETAKWDYLDAAGKLIGVVYRYDPPGRGKEFRPWDAKRRKMAPPEPRPL
HCCCCCCCCCCCCCCCCCHHHHHCCEEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCC
YNQPGLATATQVVLVEGEKCAQALIDIGIVATTAMHGANAPVEKTDWSPLAGKAVLIWPD
CCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECC
RDKPGWEYAANAAQAILSAGATTCHILYPPEEAGEGWDAADAVAEGFDIAAFIAHGPRLQ
CCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCHHHHHHCCCCEEEEECCCCCEE
MHDVVDDPEPVIGSDESVWGTEDALALAFTRRYHRDWRYVAAWGRWLVWDGHRWRTEDTL
ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHEEEECCCEEEECCCCCCCCHHH
AATDLIRNVCRHAALHAENPRLAAKLATSGTIAGVERLARADRRHAATTSEWDADPWLLN
HHHHHHHHHHHHHHHCCCCCCCEEHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE
TPGGVVDLRTGRQRPHDRDDRMTKITTATPVGDCPTWRQFLAEVTGGDVELQAYLQRMAG
CCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCC
YALTGSTQEHALFFLYGTGANGKSVFVNTLATILGDYAANAAMDTFMETRADRHPTDMAG
EEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LRGARFVAAIETEQGRRWAESKVKNLTGGDKISARFMRQDFFEFFPQFKLFVAGNHKPAI
CCCCEEEEEEECHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHH
RNIDEAMKRRLHLIPFTVTVPPERRDKHLQQKLLAERDGILAWAVQGCLDWQRLGRLDPP
HHHHHHHHHCEEEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCH
QQVLDATEEYFEAEDALGRWLDERCVREANAKSLTAELFNDWKQWAEAAGEFAGSQKRFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
DLLLTRGVEKWRNTAGLRGFRGVGLKHPAAPAYTPYADT
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIDFNEIPLVTGQLDAQRDEIRAALLARLEFVLSVLFPAGKKRRGTFVVGDILGSPGDSL
CCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCE
EVVLDGEKAGLWTDRATGDGGDIFDLIAAQAGLRVSTDFSGVLERALQLLGQASKQPVRR
EEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHCCHHHH
KRREPPTDDLGPETAKWDYLDAAGKLIGVVYRYDPPGRGKEFRPWDAKRRKMAPPEPRPL
HCCCCCCCCCCCCCCCCCHHHHHCCEEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCC
YNQPGLATATQVVLVEGEKCAQALIDIGIVATTAMHGANAPVEKTDWSPLAGKAVLIWPD
CCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECC
RDKPGWEYAANAAQAILSAGATTCHILYPPEEAGEGWDAADAVAEGFDIAAFIAHGPRLQ
CCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCHHHHHHCCCCEEEEECCCCCEE
MHDVVDDPEPVIGSDESVWGTEDALALAFTRRYHRDWRYVAAWGRWLVWDGHRWRTEDTL
ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHEEEECCCEEEECCCCCCCCHHH
AATDLIRNVCRHAALHAENPRLAAKLATSGTIAGVERLARADRRHAATTSEWDADPWLLN
HHHHHHHHHHHHHHHCCCCCCCEEHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE
TPGGVVDLRTGRQRPHDRDDRMTKITTATPVGDCPTWRQFLAEVTGGDVELQAYLQRMAG
CCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCC
YALTGSTQEHALFFLYGTGANGKSVFVNTLATILGDYAANAAMDTFMETRADRHPTDMAG
EEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LRGARFVAAIETEQGRRWAESKVKNLTGGDKISARFMRQDFFEFFPQFKLFVAGNHKPAI
CCCCEEEEEEECHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHH
RNIDEAMKRRLHLIPFTVTVPPERRDKHLQQKLLAERDGILAWAVQGCLDWQRLGRLDPP
HHHHHHHHHCEEEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCH
QQVLDATEEYFEAEDALGRWLDERCVREANAKSLTAELFNDWKQWAEAAGEFAGSQKRFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
DLLLTRGVEKWRNTAGLRGFRGVGLKHPAAPAYTPYADT
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA