Click here to switch to the map view.

The map label for this gene is 17547944

Identifier: 17547944

GI number: 17547944

Start: 3486521

End: 3486787

Strand: Reverse

Name: 17547944

Synonym: RSc3225

Alternate gene names: NA

Gene position: 3486787-3486521 (Counterclockwise)

Preceding gene: 17547945

Following gene: 17547943

Centisome position: 93.82

GC content: 60.3

Gene sequence:

>267_bases
ATGCCTACCAGCGTCGCCCTCGGCAATCATTTCGAGACATTCATCCGCGACCAGGTGCAAAGCGGCCGGTTCAACAATGT
GAGCGAGGTCGTGCGTGCCGGACTTCGCTTGCTCGAAGAGAGTGAGCAGCGTCGTCAGCTTGAACTGCAGGCGTTGCGTG
CCGAGATCGCTGCGGGCAAAGCGAGCGGTCCGGCCAAGCCGGCCGATGAAGTGTTTTCCCGTCTTGAGGCCAAGTACAGC
GCACAAGCTAGGCGCAAGCAGAACTGA

Upstream 100 bases:

>100_bases
GGCACTGGAGGTCGTGGCAGGCAGGCTCAACGAGCCGACACATTGACGGAAAGGAGGGCGGCGCTATACTAACAACTGTT
AGTAATAGTTAGGAGGCATC

Downstream 100 bases:

>100_bases
TGCGTCTGGCCATTACCCCGCTTGCCGAGCAAGACCTTGAGTCCATCGCTGACTACATCGCACAAGACAACCCGGCACGT
GCCGTCACATTCGTCCGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MPTSVALGNHFETFIRDQVQSGRFNNVSEVVRAGLRLLEESEQRRQLELQALRAEIAAGKASGPAKPADEVFSRLEAKYS
AQARRKQN

Sequences:

>Translated_88_residues
MPTSVALGNHFETFIRDQVQSGRFNNVSEVVRAGLRLLEESEQRRQLELQALRAEIAAGKASGPAKPADEVFSRLEAKYS
AQARRKQN
>Mature_87_residues
PTSVALGNHFETFIRDQVQSGRFNNVSEVVRAGLRLLEESEQRRQLELQALRAEIAAGKASGPAKPADEVFSRLEAKYSA
QARRKQN

Specific function: Unknown

COG id: COG3609

COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9826; Mature: 9695

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTSVALGNHFETFIRDQVQSGRFNNVSEVVRAGLRLLEESEQRRQLELQALRAEIAAGK
CCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ASGPAKPADEVFSRLEAKYSAQARRKQN
CCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PTSVALGNHFETFIRDQVQSGRFNNVSEVVRAGLRLLEESEQRRQLELQALRAEIAAGK
CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ASGPAKPADEVFSRLEAKYSAQARRKQN
CCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA