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The map label for this gene is tISRso1

Identifier: 17547940

GI number: 17547940

Start: 3483333

End: 3484175

Strand: Direct

Name: tISRso1

Synonym: RSc3221

Alternate gene names: NA

Gene position: 3483333-3484175 (Clockwise)

Preceding gene: 17547933

Following gene: 17547942

Centisome position: 93.73

GC content: 65.36

Gene sequence:

>843_bases
TTGTGGTGTAAAGGCGGGATCTGGAAAAAAGAACATCGAGAACGCGAGGCGAAGCTGGGTCGCAAGACCAAGCGGTACCC
AAGCGACCTGACGGATATCGAATGGGTCGCTGTGCAGCCGTTGCTGCCCGGCGCCGCCGTGCGAGGTCGGCGCCGGGAGT
GCGACTTGAGGGAGGTGGTCAACGCGCTGCGGTACCTGGTGCGGGCGGGCTGCGGCTGGCGCATGCTGCCCCATGACTTC
CCGCCGTGGCAGACCGTGTATTGGTGGTTTCGGCGGCTCATGCGCCGCTTGCTGTTCCGCACGCTGCACGACGTGGTGCT
GATGCTAGACCGGGAGTTGGCTGGGCGGCAGCCGTGCCCGAGTGCGGGCGTCATCGACAGCCAGACAGTCAAAGCGCCCT
CGGCCGACAAGCGTGGCTACGACGCGGCCAAGAAAATCGTCGGGCGCAAGCGGCATATCGCGGTGGACACGGATGGACGG
CTGCTGATGGTGAACCTGACGTCGGCGGATATTGCCGACAGCACGGGGGCACTGGCGGTGCTGGAAGCGGTGAAGAAGCG
CTGGCCGGGTGTGAAACACCTGTTCGCAGACGGCGCCTACGACCGCACGGCGCTGATGGACAGGGCCGCGACCCTCGACT
TCGTGGTTGAGGTGGTGCGCCGGCACGAGCAGCAAACGGGCTTTGCCGTTCTGCCGCGCCGCTGGGTGGTCGAGCGCACC
TTTGGGTGGATGGTTCGCTGGCGCCGACTCGTACGCGACTACGAGCAGCGCGCGGACGTCTCGGAAGCCATGATTCATAT
CGCGATGAGCGGCTTGCTACTGCGCAGAATCGCTCATCGTTGA

Upstream 100 bases:

>100_bases
AGGGGTCAGTGGCACACCGCGCAGCACGCAGGTGAAGGTGTTCTCATAGCGCACCTCGGCCTTGTCGCCATCTGAGAGCC
CGTTTGAAAATTCCCCGCCG

Downstream 100 bases:

>100_bases
ATTTCCAAACGGGCTCTGAGCGCATCTCGATGTGCCAGCCGCTGGCCTCAGCTAGCGCCCGCGCCTGTTCGCCCAACGCC
TTTGGAAAGTTGTTGATGAC

Product: transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; Transposase IS5 Family Protein; Transposase And Inactivated Derivatives-Like Protein; IS5 Family Transposase; Transposase Of; LOW QUALITY PROTEIN Transposase; IS4 Insertion Sequence Transposase Protein; Transposase-Like Protein; Transposase Fragment; Transposase And Inactivated Derivatives-Like; Transposase Protein; ISXo3 Transposase ORF B; Transposase And Inactivated Derivatives; Transposase IS5 Family Protein-Like Protein; Family Transposase; Transposase IS4 Family; Transposase Is4 Family Protein; Transposon; IS4 Family Insertion Sequence Transposase Protein; Transposase Is4 Family; IS3/IS4 Family Insertion Sequence Transposase Protein; IS Transposase; ISPsy19 Transposase; Transposase IS5 Family; Isxo3 Transposase Protein; Insertion Sequence Transposase Truncated Protein

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MWCKGGIWKKEHREREAKLGRKTKRYPSDLTDIEWVAVQPLLPGAAVRGRRRECDLREVVNALRYLVRAGCGWRMLPHDF
PPWQTVYWWFRRLMRRLLFRTLHDVVLMLDRELAGRQPCPSAGVIDSQTVKAPSADKRGYDAAKKIVGRKRHIAVDTDGR
LLMVNLTSADIADSTGALAVLEAVKKRWPGVKHLFADGAYDRTALMDRAATLDFVVEVVRRHEQQTGFAVLPRRWVVERT
FGWMVRWRRLVRDYEQRADVSEAMIHIAMSGLLLRRIAHR

Sequences:

>Translated_280_residues
MWCKGGIWKKEHREREAKLGRKTKRYPSDLTDIEWVAVQPLLPGAAVRGRRRECDLREVVNALRYLVRAGCGWRMLPHDF
PPWQTVYWWFRRLMRRLLFRTLHDVVLMLDRELAGRQPCPSAGVIDSQTVKAPSADKRGYDAAKKIVGRKRHIAVDTDGR
LLMVNLTSADIADSTGALAVLEAVKKRWPGVKHLFADGAYDRTALMDRAATLDFVVEVVRRHEQQTGFAVLPRRWVVERT
FGWMVRWRRLVRDYEQRADVSEAMIHIAMSGLLLRRIAHR
>Mature_280_residues
MWCKGGIWKKEHREREAKLGRKTKRYPSDLTDIEWVAVQPLLPGAAVRGRRRECDLREVVNALRYLVRAGCGWRMLPHDF
PPWQTVYWWFRRLMRRLLFRTLHDVVLMLDRELAGRQPCPSAGVIDSQTVKAPSADKRGYDAAKKIVGRKRHIAVDTDGR
LLMVNLTSADIADSTGALAVLEAVKKRWPGVKHLFADGAYDRTALMDRAATLDFVVEVVRRHEQQTGFAVLPRRWVVERT
FGWMVRWRRLVRDYEQRADVSEAMIHIAMSGLLLRRIAHR

Specific function: Unknown

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32501; Mature: 32501

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWCKGGIWKKEHREREAKLGRKTKRYPSDLTDIEWVAVQPLLPGAAVRGRRRECDLREVV
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHCCCCCCCCHHHHH
NALRYLVRAGCGWRMLPHDFPPWQTVYWWFRRLMRRLLFRTLHDVVLMLDRELAGRQPCP
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SAGVIDSQTVKAPSADKRGYDAAKKIVGRKRHIAVDTDGRLLMVNLTSADIADSTGALAV
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCCCCHHHHH
LEAVKKRWPGVKHLFADGAYDRTALMDRAATLDFVVEVVRRHEQQTGFAVLPRRWVVERT
HHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHH
FGWMVRWRRLVRDYEQRADVSEAMIHIAMSGLLLRRIAHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MWCKGGIWKKEHREREAKLGRKTKRYPSDLTDIEWVAVQPLLPGAAVRGRRRECDLREVV
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHCCCCCCCCHHHHH
NALRYLVRAGCGWRMLPHDFPPWQTVYWWFRRLMRRLLFRTLHDVVLMLDRELAGRQPCP
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SAGVIDSQTVKAPSADKRGYDAAKKIVGRKRHIAVDTDGRLLMVNLTSADIADSTGALAV
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCCCCHHHHH
LEAVKKRWPGVKHLFADGAYDRTALMDRAATLDFVVEVVRRHEQQTGFAVLPRRWVVERT
HHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHH
FGWMVRWRRLVRDYEQRADVSEAMIHIAMSGLLLRRIAHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA