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The map label for this gene is 17547921

Identifier: 17547921

GI number: 17547921

Start: 3462876

End: 3463547

Strand: Reverse

Name: 17547921

Synonym: RSc3202

Alternate gene names: NA

Gene position: 3463547-3462876 (Counterclockwise)

Preceding gene: 17547922

Following gene: 17547917

Centisome position: 93.2

GC content: 63.39

Gene sequence:

>672_bases
TTGCGCGGCTCGGGCAGCACTTATAACGAGCGCTGGGCAGCCCTCGCGCTGGAGAGCGCGCATAAGGGCTTCCTGCGGAC
CCAGCGCGACGTGGTGTTAAGCGGCGTGATGGCGTACTTCTCGCTGGAGCAGGCCAAGCAGAACGTCGCGCTTGCGCAGG
CGGCGTTGAAGCGGGCGAACGAAGCCAAGGCGATCAACGAAGCACTGCTGGCGGCCGGACGCATCGCCCGGATTGCCCTG
CTGCAGAGTGATGCCGATGTGGCGCAGGCTGACTTGACTTTGACGCAGTCCGAACAGGCCGAGAGCGTCGCCCGCCGTCA
ACTGCTGCGCGCGATCGGCAGGTACGACCTGGACGCCGACCGCACAGACATGACACTCACGGATTCCTTTACCTCCTACC
TATCGCCGGCAACGCAAAACGAAGGTCTGACTATTCGGGACGCGCTTGCCAAGCGCATCGATCTGCAGCTTGCGAGAGAC
ACGGTGATAGCAAACCAGTTCAACGTGATCGCGGCGGAAGACGGCATGCGCAACCAGCTGGATCTGTACGCACGGCTGGA
TCGGACGAGCGATAACACTACTGGCACGGCCACCCGCCAGATCAACCGAGCGGTCGGCCTGAGCTCTTCCATGCCACTGG
ACAAGTCCCAGACGCTGCCCGGGTCGGCCTGA

Upstream 100 bases:

>100_bases
CGCCGGTACAACCGTTTGGCCAGGGTGCGCTAGCTTCGTCCTGGGCGCCAGTCTAAACACCAGCAACCGCATTACGTCGA
TCTCGCTGTCGCAGCCGCTC

Downstream 100 bases:

>100_bases
AGAAGGCCGAACTGTCGCTGGCGGATCTGGAGCGTACCGCGCGCACCGAGGTAAGCGATGCGCTGAAGAATATCGACTTT
GCCTTTCTTCAGCACCGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MRGSGSTYNERWAALALESAHKGFLRTQRDVVLSGVMAYFSLEQAKQNVALAQAALKRANEAKAINEALLAAGRIARIAL
LQSDADVAQADLTLTQSEQAESVARRQLLRAIGRYDLDADRTDMTLTDSFTSYLSPATQNEGLTIRDALAKRIDLQLARD
TVIANQFNVIAAEDGMRNQLDLYARLDRTSDNTTGTATRQINRAVGLSSSMPLDKSQTLPGSA

Sequences:

>Translated_223_residues
MRGSGSTYNERWAALALESAHKGFLRTQRDVVLSGVMAYFSLEQAKQNVALAQAALKRANEAKAINEALLAAGRIARIAL
LQSDADVAQADLTLTQSEQAESVARRQLLRAIGRYDLDADRTDMTLTDSFTSYLSPATQNEGLTIRDALAKRIDLQLARD
TVIANQFNVIAAEDGMRNQLDLYARLDRTSDNTTGTATRQINRAVGLSSSMPLDKSQTLPGSA
>Mature_223_residues
MRGSGSTYNERWAALALESAHKGFLRTQRDVVLSGVMAYFSLEQAKQNVALAQAALKRANEAKAINEALLAAGRIARIAL
LQSDADVAQADLTLTQSEQAESVARRQLLRAIGRYDLDADRTDMTLTDSFTSYLSPATQNEGLTIRDALAKRIDLQLARD
TVIANQFNVIAAEDGMRNQLDLYARLDRTSDNTTGTATRQINRAVGLSSSMPLDKSQTLPGSA

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24233; Mature: 24233

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGSGSTYNERWAALALESAHKGFLRTQRDVVLSGVMAYFSLEQAKQNVALAQAALKRAN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAKAINEALLAAGRIARIALLQSDADVAQADLTLTQSEQAESVARRQLLRAIGRYDLDAD
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEECCHHHHHHHHHHHHHHHHHCCCCCCC
RTDMTLTDSFTSYLSPATQNEGLTIRDALAKRIDLQLARDTVIANQFNVIAAEDGMRNQL
CCCEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHH
DLYARLDRTSDNTTGTATRQINRAVGLSSSMPLDKSQTLPGSA
HHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRGSGSTYNERWAALALESAHKGFLRTQRDVVLSGVMAYFSLEQAKQNVALAQAALKRAN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAKAINEALLAAGRIARIALLQSDADVAQADLTLTQSEQAESVARRQLLRAIGRYDLDAD
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEECCHHHHHHHHHHHHHHHHHCCCCCCC
RTDMTLTDSFTSYLSPATQNEGLTIRDALAKRIDLQLARDTVIANQFNVIAAEDGMRNQL
CCCEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHH
DLYARLDRTSDNTTGTATRQINRAVGLSSSMPLDKSQTLPGSA
HHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA