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The map label for this gene is arrD [H]

Identifier: 17547911

GI number: 17547911

Start: 3456925

End: 3457386

Strand: Reverse

Name: arrD [H]

Synonym: RSc3192

Alternate gene names: 17547911

Gene position: 3457386-3456925 (Counterclockwise)

Preceding gene: 17547912

Following gene: 17547910

Centisome position: 93.03

GC content: 65.58

Gene sequence:

>462_bases
GTGACCAACATCCCACTACCGGCCATCGAACTGGCCAAGCATTTCGAGGGATTTCATAGGGTGGCGAGGGTCGACCCCAC
CCGGGCTCAGCCGTATGTCTGTCCTGCCGGGTTTTGGACAGTTGGCTACGGTCACCTTTGCGATCCGACGCACCCGCCCA
TCACGCAGGCCCAGGCCGAAGTCTATCTGGCGGCGGATCTCGTGACAGCGCTCAACGCGACGCTGCGCTACTGCCCCGTG
CTTGCCGCCGAGCCCCAGGGCCGGCTCGCCGCCATTGTGGACTTCACCTTCAACCTGGGGGCGGGGCGGTTGCAGACTTC
GACCTTGCGGCGGCGGGTCAACCAGCGCGACTGGTCCGCTGCTGCAAGCGAGCTGCGCCGCTGGGTCTATGGTGGCGGCA
AGGTGCTGCCGGGGCTCGCCGCACGTCGCGAGGCAGAAGTGGCTTTATTGCGATTGAACTGA

Upstream 100 bases:

>100_bases
GCGAGGATCCACGCCCACCTCGGCTCATCTGTGCGCAGTACGGCATCGGCAGAACCACGCTGTACCAGATCAAACGCCGT
GAAACCTGGGGGTGCTTGGC

Downstream 100 bases:

>100_bases
GGTGACGCTTGGCTTCTGTGTTGAACAGCGCGTTCATGTCATCACACCAACCACACCGGAGTACAAGATGTCCAAGTCGA
TGCGATTCAAAACCCCTGTG

Product: lysozyme (endolysin) protein

Products: NA

Alternate protein names: Endolysin; Lysis protein; Muramidase [H]

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MTNIPLPAIELAKHFEGFHRVARVDPTRAQPYVCPAGFWTVGYGHLCDPTHPPITQAQAEVYLAADLVTALNATLRYCPV
LAAEPQGRLAAIVDFTFNLGAGRLQTSTLRRRVNQRDWSAAASELRRWVYGGGKVLPGLAARREAEVALLRLN

Sequences:

>Translated_153_residues
MTNIPLPAIELAKHFEGFHRVARVDPTRAQPYVCPAGFWTVGYGHLCDPTHPPITQAQAEVYLAADLVTALNATLRYCPV
LAAEPQGRLAAIVDFTFNLGAGRLQTSTLRRRVNQRDWSAAASELRRWVYGGGKVLPGLAARREAEVALLRLN
>Mature_152_residues
TNIPLPAIELAKHFEGFHRVARVDPTRAQPYVCPAGFWTVGYGHLCDPTHPPITQAQAEVYLAADLVTALNATLRYCPVL
AAEPQGRLAAIVDFTFNLGAGRLQTSTLRRRVNQRDWSAAASELRRWVYGGGKVLPGLAARREAEVALLRLN

Specific function: Essential for lysis of bacterial cell wall, by showing cell wall hydrolyzing activity [H]

COG id: COG3772

COG function: function code R; Phage-related lysozyme (muraminidase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 24 family [H]

Homologues:

Organism=Escherichia coli, GI1786768, Length=118, Percent_Identity=38.9830508474576, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002196 [H]

Pfam domain/function: PF00959 Phage_lysozyme [H]

EC number: =3.2.1.17 [H]

Molecular weight: Translated: 16818; Mature: 16686

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNIPLPAIELAKHFEGFHRVARVDPTRAQPYVCPAGFWTVGYGHLCDPTHPPITQAQAE
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHH
VYLAADLVTALNATLRYCPVLAAEPQGRLAAIVDFTFNLGAGRLQTSTLRRRVNQRDWSA
HHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCHHHH
AASELRRWVYGGGKVLPGLAARREAEVALLRLN
HHHHHHHHHHCCCCCCCCHHHCCCCEEEEEEEC
>Mature Secondary Structure 
TNIPLPAIELAKHFEGFHRVARVDPTRAQPYVCPAGFWTVGYGHLCDPTHPPITQAQAE
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHH
VYLAADLVTALNATLRYCPVLAAEPQGRLAAIVDFTFNLGAGRLQTSTLRRRVNQRDWSA
HHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCHHHH
AASELRRWVYGGGKVLPGLAARREAEVALLRLN
HHHHHHHHHHCCCCCCCCHHHCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]