| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17547906
Identifier: 17547906
GI number: 17547906
Start: 3446534
End: 3446797
Strand: Reverse
Name: 17547906
Synonym: RSc3187
Alternate gene names: NA
Gene position: 3446797-3446534 (Counterclockwise)
Preceding gene: 17547907
Following gene: 17547905
Centisome position: 92.75
GC content: 48.11
Gene sequence:
>264_bases ATGCCGAAGTTCGCATGCAAATGTGGGAATGTGCTCAATTTATCGGGCGTTTGGCCAAAGTGTGAGTGGCGCTTGGTGCC AATGGAACGTGTAGGTGAGATTGCAGATAGGCTTGACTCGGGGGAGGAGCCTAGTGGGGATGAGTTTTACGACTTGATCG ACGATGTAAGTGTCACTGTCTACCGATGCTCTGTATGCAGCAGATTGCATTTGGAGGTCGGTAAGAACAAATTTGATACG TATCTTAAAGAGTCGTCGTCTTGA
Upstream 100 bases:
>100_bases CTTGGGGAAAGCCAAATGCGAAGTCCATACAAACTCTATTTTTCCAGAGGCAGGATGGAACTATTGTGCGCTTTAACCGA CCGGTTTCAGGAGGGTAAGA
Downstream 100 bases:
>100_bases TGATTGCTTGTGGCGTTGTTGCATAAATTTGTCCGCCGTGCGGCGTGCTGACGTTTGCGTGTAACGGACGGGTGGGTACG CTGACGAGCAAGGGGCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MPKFACKCGNVLNLSGVWPKCEWRLVPMERVGEIADRLDSGEEPSGDEFYDLIDDVSVTVYRCSVCSRLHLEVGKNKFDT YLKESSS
Sequences:
>Translated_87_residues MPKFACKCGNVLNLSGVWPKCEWRLVPMERVGEIADRLDSGEEPSGDEFYDLIDDVSVTVYRCSVCSRLHLEVGKNKFDT YLKESSS >Mature_86_residues PKFACKCGNVLNLSGVWPKCEWRLVPMERVGEIADRLDSGEEPSGDEFYDLIDDVSVTVYRCSVCSRLHLEVGKNKFDTY LKESSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9850; Mature: 9719
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 5.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKFACKCGNVLNLSGVWPKCEWRLVPMERVGEIADRLDSGEEPSGDEFYDLIDDVSVTV CCCCCCCCCCEEECCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH YRCSVCSRLHLEVGKNKFDTYLKESSS HHHHHHHHHHHHCCCCHHHHHHHCCCC >Mature Secondary Structure PKFACKCGNVLNLSGVWPKCEWRLVPMERVGEIADRLDSGEEPSGDEFYDLIDDVSVTV CCCCCCCCCEEECCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH YRCSVCSRLHLEVGKNKFDTYLKESSS HHHHHHHHHHHHCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA