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The map label for this gene is 17547898

Identifier: 17547898

GI number: 17547898

Start: 3438377

End: 3439468

Strand: Reverse

Name: 17547898

Synonym: RSc3179

Alternate gene names: NA

Gene position: 3439468-3438377 (Counterclockwise)

Preceding gene: 17547899

Following gene: 17547897

Centisome position: 92.55

GC content: 62.18

Gene sequence:

>1092_bases
TTGCCGCTACCGGAATCGTCCGATGACGCCCCATTGCCGACGGACGTTCCAAAGGACGCTGCCGAGGCACTGGTCTGCTT
TCTGACTCAGCATGTCCGTGCACTGATGTCGCCCCACGCGGATCCTGTGCCGTCCTGTCCGCGATGCGGCGGCACGCAGA
TCCACAAGAAGGGATATGCGCCACTGCAGACGGGGCCACTTCCGACCTATCAGTGCGAGGGGTGCGACCACTACTTCAGT
CGCTTGAGCGGCACGCCGCTTTCCGGGCATCGGATTCGACGCAGCGCTGAGGAGCTGATCACGATGCTGCCGCAAGCGAT
CGGCTGTCCGGAGGCGGCGCGTCGGCTCGGGGTGATGGAGCGGACCATTCGCAACACGGTCAGGATGTTTCGCCGTTGGG
TGCTCGAATTGGATCCGAGTGGCCACCATGAGCGCCATATTCGGCTGGGAGGGCGTTTCACCGCAGTTCGGGATCAAGCG
CCGCCGGTGGTTGATGAGCAGATCGCCTATGAGGATGTGGCGCTTACCGCGAAACTGCTCGAAGACTTTGAGACTATCCA
TTCCAACAAGCACTTTCCGATGCCGGACTGCCCGGCATGTGGTGCTGATCGTCTGGTGACAAAGGGCACTTTCAGCGGCT
TTGCACGCTTCAAGTGCGCCTCGTGCGGCAAACAATTCAATCGGCGCACCGGGACGCCGTTCACACGCAACCGGAAGGTG
TATGAGCGGCAGCGGGCATTGATTCGCTACCTCGGGCTACCGCTCTCGATCACGCAGCTGGCAGAGATCGTCGGTGGCGA
CCACGGCAACGTCGCCAGGCTGATACGTGAGTTCCGTGAGCGCTGTGATCAACTGGATCCAACCGGGCAGCTGTCCCATC
GCATTCGGGCCGGCGCGCGTCCGGCGGAGGACACGCCATGCATACAGTGTGGGGCACGGCATGTGCGTTTCGATGTCCGG
GGGATCACGCCTGGAAAATGCGCTGTTTGCGGCCGACTGATCTCCATGCGGCGCGCGATCATCGAACGCGATGGAGTACT
GGAGGTCGGTCCGTGGCAATGGGCCGAGCAACTGCAGCAGGGCAATCAGTAG

Upstream 100 bases:

>100_bases
GCCAACTGCGAGGGAAATGCGAATGAGCGGGAATGTCAAGACAAGCGGGGCCAGGGGGCGACGACCGAGCACTGGGCAGG
CATCCCGAAGGGAGTCGGCG

Downstream 100 bases:

>100_bases
TCCATCCTGAACAACTCGTTGTCCCTGCTGCTCCGCCCTATGTCATCGCCAGACGGCCATCCATCCACTTCGGCGGACGC
TTCACTAACGCCCTACGCTA

Product: transposase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MPLPESSDDAPLPTDVPKDAAEALVCFLTQHVRALMSPHADPVPSCPRCGGTQIHKKGYAPLQTGPLPTYQCEGCDHYFS
RLSGTPLSGHRIRRSAEELITMLPQAIGCPEAARRLGVMERTIRNTVRMFRRWVLELDPSGHHERHIRLGGRFTAVRDQA
PPVVDEQIAYEDVALTAKLLEDFETIHSNKHFPMPDCPACGADRLVTKGTFSGFARFKCASCGKQFNRRTGTPFTRNRKV
YERQRALIRYLGLPLSITQLAEIVGGDHGNVARLIREFRERCDQLDPTGQLSHRIRAGARPAEDTPCIQCGARHVRFDVR
GITPGKCAVCGRLISMRRAIIERDGVLEVGPWQWAEQLQQGNQ

Sequences:

>Translated_363_residues
MPLPESSDDAPLPTDVPKDAAEALVCFLTQHVRALMSPHADPVPSCPRCGGTQIHKKGYAPLQTGPLPTYQCEGCDHYFS
RLSGTPLSGHRIRRSAEELITMLPQAIGCPEAARRLGVMERTIRNTVRMFRRWVLELDPSGHHERHIRLGGRFTAVRDQA
PPVVDEQIAYEDVALTAKLLEDFETIHSNKHFPMPDCPACGADRLVTKGTFSGFARFKCASCGKQFNRRTGTPFTRNRKV
YERQRALIRYLGLPLSITQLAEIVGGDHGNVARLIREFRERCDQLDPTGQLSHRIRAGARPAEDTPCIQCGARHVRFDVR
GITPGKCAVCGRLISMRRAIIERDGVLEVGPWQWAEQLQQGNQ
>Mature_362_residues
PLPESSDDAPLPTDVPKDAAEALVCFLTQHVRALMSPHADPVPSCPRCGGTQIHKKGYAPLQTGPLPTYQCEGCDHYFSR
LSGTPLSGHRIRRSAEELITMLPQAIGCPEAARRLGVMERTIRNTVRMFRRWVLELDPSGHHERHIRLGGRFTAVRDQAP
PVVDEQIAYEDVALTAKLLEDFETIHSNKHFPMPDCPACGADRLVTKGTFSGFARFKCASCGKQFNRRTGTPFTRNRKVY
ERQRALIRYLGLPLSITQLAEIVGGDHGNVARLIREFRERCDQLDPTGQLSHRIRAGARPAEDTPCIQCGARHVRFDVRG
ITPGKCAVCGRLISMRRAIIERDGVLEVGPWQWAEQLQQGNQ

Specific function: Unknown

COG id: COG3677

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40543; Mature: 40412

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLPESSDDAPLPTDVPKDAAEALVCFLTQHVRALMSPHADPVPSCPRCGGTQIHKKGYA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCC
PLQTGPLPTYQCEGCDHYFSRLSGTPLSGHRIRRSAEELITMLPQAIGCPEAARRLGVME
CCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
RTIRNTVRMFRRWVLELDPSGHHERHIRLGGRFTAVRDQAPPVVDEQIAYEDVALTAKLL
HHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEECCCCCCCHHHHHHHHHHHHHHHHH
EDFETIHSNKHFPMPDCPACGADRLVTKGTFSGFARFKCASCGKQFNRRTGTPFTRNRKV
HHHHHHHCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
YERQRALIRYLGLPLSITQLAEIVGGDHGNVARLIREFRERCDQLDPTGQLSHRIRAGAR
HHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC
PAEDTPCIQCGARHVRFDVRGITPGKCAVCGRLISMRRAIIERDGVLEVGPWQWAEQLQQ
CCCCCCHHHHCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHC
GNQ
CCC
>Mature Secondary Structure 
PLPESSDDAPLPTDVPKDAAEALVCFLTQHVRALMSPHADPVPSCPRCGGTQIHKKGYA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCC
PLQTGPLPTYQCEGCDHYFSRLSGTPLSGHRIRRSAEELITMLPQAIGCPEAARRLGVME
CCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
RTIRNTVRMFRRWVLELDPSGHHERHIRLGGRFTAVRDQAPPVVDEQIAYEDVALTAKLL
HHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEECCCCCCCHHHHHHHHHHHHHHHHH
EDFETIHSNKHFPMPDCPACGADRLVTKGTFSGFARFKCASCGKQFNRRTGTPFTRNRKV
HHHHHHHCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
YERQRALIRYLGLPLSITQLAEIVGGDHGNVARLIREFRERCDQLDPTGQLSHRIRAGAR
HHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC
PAEDTPCIQCGARHVRFDVRGITPGKCAVCGRLISMRRAIIERDGVLEVGPWQWAEQLQQ
CCCCCCHHHHCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHC
GNQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA