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The map label for this gene is 17547886

Identifier: 17547886

GI number: 17547886

Start: 3426451

End: 3427341

Strand: Reverse

Name: 17547886

Synonym: RSc3167

Alternate gene names: NA

Gene position: 3427341-3426451 (Counterclockwise)

Preceding gene: 17547888

Following gene: 17547880

Centisome position: 92.22

GC content: 54.43

Gene sequence:

>891_bases
ATGCGAAAGAGCATTGAGTATTTTCAGCTCGCTATTGGATACCAGCCGAACTTTGCGGCCGCCTATGATGGCGTGGCCGA
TGCTTACACGATGCTGGCATGTCGCGGCGTGAGCCCTGCGCGCGAAACGTTTCATCAAGCAAAAATGGCAGCCAGGAAAG
CGCTGCAGATTGAACCTGATTTGGGTGAGGCTTATGCATCACTGGCCCATGTGCGTTTGCACGATTGGGATTGGGTCGAT
CTGGAGCGGGATTTCCTGCGCGCCATTGAACTGAATCCAGGACACGCGATCGCCTACTACTGGTACGCGGAATATCTCAT
GATGGCAGGCAGAGCCGAAGACGCCATTGCCAGGGTCAGGCAGTCCCAACAGATGGATCCGTTGAATTCAGTGCTGAATT
CATCTGTTGCCATCATCTTGTACCTTGCTCGGCGATACGACCAGGCACGGGAAGAGCTCAATAAAGCCCTGGAAATCGAT
CCAAATCACTTTCTGCTTCACTTCAGGCTGGGATTGGTTTACCAGCAACAGAAGTTGTTCCATGACGCAATCGAGGAGAT
GCAGAAGGCTGTAACGCTTTCCGGGAGGAGCACAGAGGCGCTGACAGGGCTGGCCCAGACCTATGCTGCCGCCGACATGA
GAGCCGCCATGCAGCAGATCGTGGATGCGCTGGAGACGGAATCCGAACAGCACTACGTCCACCCCTACAACATGGCGAAA
GTGTTTGGTTCGCTCGGGGACAAAGAGCAGACCTTCGGCTGGCTGGAAAAAGCCTACGATGAGCACAGTCCTGACTTCAT
TGAGCTCAGGACAGAACCTACCTTCGACAGCGTTCGCTTCGATCCCAGATTCTCTGAACTGCTATCCCGCGTCGGGTTCA
ACCAGATCTGA

Upstream 100 bases:

>100_bases
AAAGGGGTGGCGCTTAGACCGTACGCCTGCCATTGATGCGCAGGCGCACGAAGCGTATCTCAAGGGGCGCCACTTCTGGT
CCAAACGCACCGAAGAAGGC

Downstream 100 bases:

>100_bases
AGGACGACGCTCTGTGCTGGGCGCCAGGGCAAGTGGTTGTGCATCACTCCGGCTGCAGTCGCTGAATCAGCGTCTTACCC
CAACGCGGCCGCGTCGGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Repeat-Containing Serine/Threonin Protein Kinase; Serine/Threonine Protein Kinase; Bacterial Transcriptional Activator Domain Family; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Protein Kinase; Transcriptional Regulator Domain-Containing Protein; TPR Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MRKSIEYFQLAIGYQPNFAAAYDGVADAYTMLACRGVSPARETFHQAKMAARKALQIEPDLGEAYASLAHVRLHDWDWVD
LERDFLRAIELNPGHAIAYYWYAEYLMMAGRAEDAIARVRQSQQMDPLNSVLNSSVAIILYLARRYDQAREELNKALEID
PNHFLLHFRLGLVYQQQKLFHDAIEEMQKAVTLSGRSTEALTGLAQTYAAADMRAAMQQIVDALETESEQHYVHPYNMAK
VFGSLGDKEQTFGWLEKAYDEHSPDFIELRTEPTFDSVRFDPRFSELLSRVGFNQI

Sequences:

>Translated_296_residues
MRKSIEYFQLAIGYQPNFAAAYDGVADAYTMLACRGVSPARETFHQAKMAARKALQIEPDLGEAYASLAHVRLHDWDWVD
LERDFLRAIELNPGHAIAYYWYAEYLMMAGRAEDAIARVRQSQQMDPLNSVLNSSVAIILYLARRYDQAREELNKALEID
PNHFLLHFRLGLVYQQQKLFHDAIEEMQKAVTLSGRSTEALTGLAQTYAAADMRAAMQQIVDALETESEQHYVHPYNMAK
VFGSLGDKEQTFGWLEKAYDEHSPDFIELRTEPTFDSVRFDPRFSELLSRVGFNQI
>Mature_296_residues
MRKSIEYFQLAIGYQPNFAAAYDGVADAYTMLACRGVSPARETFHQAKMAARKALQIEPDLGEAYASLAHVRLHDWDWVD
LERDFLRAIELNPGHAIAYYWYAEYLMMAGRAEDAIARVRQSQQMDPLNSVLNSSVAIILYLARRYDQAREELNKALEID
PNHFLLHFRLGLVYQQQKLFHDAIEEMQKAVTLSGRSTEALTGLAQTYAAADMRAAMQQIVDALETESEQHYVHPYNMAK
VFGSLGDKEQTFGWLEKAYDEHSPDFIELRTEPTFDSVRFDPRFSELLSRVGFNQI

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI115532692, Length=208, Percent_Identity=28.8461538461538, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI115532690, Length=208, Percent_Identity=28.8461538461538, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33930; Mature: 33930

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKSIEYFQLAIGYQPNFAAAYDGVADAYTMLACRGVSPARETFHQAKMAARKALQIEPD
CCCCHHHHHHEECCCCCCHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC
LGEAYASLAHVRLHDWDWVDLERDFLRAIELNPGHAIAYYWYAEYLMMAGRAEDAIARVR
HHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHH
QSQQMDPLNSVLNSSVAIILYLARRYDQAREELNKALEIDPNHFLLHFRLGLVYQQQKLF
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEHHHHHHHHHHHHH
HDAIEEMQKAVTLSGRSTEALTGLAQTYAAADMRAAMQQIVDALETESEQHYVHPYNMAK
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHH
VFGSLGDKEQTFGWLEKAYDEHSPDFIELRTEPTFDSVRFDPRFSELLSRVGFNQI
HHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRKSIEYFQLAIGYQPNFAAAYDGVADAYTMLACRGVSPARETFHQAKMAARKALQIEPD
CCCCHHHHHHEECCCCCCHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC
LGEAYASLAHVRLHDWDWVDLERDFLRAIELNPGHAIAYYWYAEYLMMAGRAEDAIARVR
HHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHH
QSQQMDPLNSVLNSSVAIILYLARRYDQAREELNKALEIDPNHFLLHFRLGLVYQQQKLF
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEHHHHHHHHHHHHH
HDAIEEMQKAVTLSGRSTEALTGLAQTYAAADMRAAMQQIVDALETESEQHYVHPYNMAK
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHH
VFGSLGDKEQTFGWLEKAYDEHSPDFIELRTEPTFDSVRFDPRFSELLSRVGFNQI
HHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA