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The map label for this gene is ydfH [H]

Identifier: 17547879

GI number: 17547879

Start: 3415462

End: 3417342

Strand: Reverse

Name: ydfH [H]

Synonym: RSc3160

Alternate gene names: 17547879

Gene position: 3417342-3415462 (Counterclockwise)

Preceding gene: 17547880

Following gene: 17547878

Centisome position: 91.95

GC content: 64.65

Gene sequence:

>1881_bases
ATGGCGCTGCTCGTCATTGTGGGCGCCATCTACCTGGACGCCGATGGCGAGTCATTCCCCGCAGCAAACCTGCATCTGAC
GCAGGCCGAGTGGCAGGTCACCGATGCGCGGGGTTTCACGACGCCGTCGGCGACGCTGGACAGCCAAAGCTTGCCGAATG
CATGGCGGCATGTCGCGCTGCCCCTGGACTTGCCCATCGCCCTGTTGCGTCAGGCCCATGCCAACGCAATCACCACGGCC
GGGCAGACCACCTGGCTCAGGCTCGCCGTCCCCCCATTGCCCCCGCATTCCGGCCCGCTGGCGTTGTATGGCATTCGCGT
CAAGACTGACGGCACCATCGCGGTGTATGTCAACGGCGAGCTGGTGCACCGGGCGCAGCAGCAGGGGCCCTTGTGGAACA
GTACCCGGACCCCGCTGTGGGTGGTGCTGGAGCGGCATGCGGACGACGCGCCGGTGCGTGAAATCCTCATCCGCCTGGAG
CACACCGAGCGGACCCAGGTGGCCTTGTCCTCGCTGTGGCTGGGCCCCGTCGAGACGCTGCGGGTGCGCTATCACGTACG
CCAATGGCTGCAGCAGGAACTCCCGAGAATGCTCAGCGCGGCGTTCCTGGCAGTGGGCATTTTTGCCCTGTTTGTCTGGT
TCAAGCGCCGCCACGAAACGGGCTATCTGCTGTTCTTCAATCTGGCTGTCACCTCGTTCTTACGGGGGCTGCACTTCTAT
GCGGACTTGCCGATCGCCAATGACGGGTTCGCCTGGCTGACGGTCAATTCCCTGCTGTGGCTGGTCACCGTGGTGCACTT
TTTTCTGTGCCAATTGCATGGCCGCGCGCTGACATGGTTTACGCGGGCGCTGGTCGGGATGACCGGCCTGATCGGCGTGC
TGACGCTGCCGGGGCTGGCGGTACTGCCAAACACACCGAAAGTCACCCCGCTGATTTATCCGATGGCAGCGCTCATGGGG
GCGGCCGTCGGGCTGGTGGGCGGCATCAGCGCCTGGCGCCGGTCCAATGAAGGCGTACTGGTGGCGATCGGCGTCAGCGT
CTGTACGTTGCTGGGCGTGTCCGATTGGCTGCTGCAAAACAACTTCGTCAGCCCGGAAGGCTGGTATTTCGGGGCCTATA
CCAATGCCATCACGTTCGGCATTTTCGGCATCCTGATGTACCGGCGCTACGTCAATGCCATCAGCGAGGTCGAGTTGACC
AACGCAAACCTCGCGCAGCGCCTCAAACACCGCGAAGCCGAACTCGAAAGCAGCCATCAGCGGCTACGTGCCGCGGAGCG
GCAGCAAGCGATCAGCGCGGAACGGCAGCGCCTGATGCAGGACATGCACGACGGGCTCGGTGCATCCCTGATCAGCGCCA
TCCGGTCGGTCGAGCGCGGGGCCGTCAGCGATGCCAAGGTCTCGCAAATCCTCAAGAGCTGCCTTGACGATCTGAAGCTG
ACCATCGACTCGATGGAGCCGGTGGAGGCCGACCTGCTGCTGTTGCTGGCCACGCTGCGCTTCCGGCTGGAACCGCGCCT
GGAGGGCACGGGCATCGCCTTGCTGTGGGAAGTCCGGAAGCTGCCGACGCTCACCTGGCTGGACCCCTCCAGTGCCCTGC
ACATCCTGCGCATCGTGCAGGAAAGCATTGCCAACATCCTGCACCACACGCAGGCGAGCGAGATCCGGGTAGGAACGGCG
GTGGAGTCGACCGGTGTGCTGGTCAGCATCGTAGACAACGGCCGGGGCTTCGATGTCGAAAAAACCCTCGCCGCGGGCAA
GGGGAACGGCCTGCGCAACCTGCAGCGCCGCGCCCAGGCCATCGACGGCACGGTCCGTTGGACGTCGGGGCCGGAAGGCA
CACAATTCACGCTCTGGCTGCCGTTGGAGCGGCATGTCTAG

Upstream 100 bases:

>100_bases
TTTCCTACTGAACAGCCGGCTTTTTCGAGCATGGCGATATCGGCGCCGCATGAGATACCGCCCCACACACCTTCCCGCCT
ACGCAATCTTTGTCTTTTCC

Downstream 100 bases:

>100_bases
CCACAACCCCCTTCCGTTGCGATTGCAGGCCGGCACCGTGCATTGACTCGGCGGCTCGTGACGTCGGCTCCAGCGGTTTG
ATGGAGGAAGACGAGCGGCG

Product: two component sensor histidine kinase transcription regulator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 626; Mature: 625

Protein sequence:

>626_residues
MALLVIVGAIYLDADGESFPAANLHLTQAEWQVTDARGFTTPSATLDSQSLPNAWRHVALPLDLPIALLRQAHANAITTA
GQTTWLRLAVPPLPPHSGPLALYGIRVKTDGTIAVYVNGELVHRAQQQGPLWNSTRTPLWVVLERHADDAPVREILIRLE
HTERTQVALSSLWLGPVETLRVRYHVRQWLQQELPRMLSAAFLAVGIFALFVWFKRRHETGYLLFFNLAVTSFLRGLHFY
ADLPIANDGFAWLTVNSLLWLVTVVHFFLCQLHGRALTWFTRALVGMTGLIGVLTLPGLAVLPNTPKVTPLIYPMAALMG
AAVGLVGGISAWRRSNEGVLVAIGVSVCTLLGVSDWLLQNNFVSPEGWYFGAYTNAITFGIFGILMYRRYVNAISEVELT
NANLAQRLKHREAELESSHQRLRAAERQQAISAERQRLMQDMHDGLGASLISAIRSVERGAVSDAKVSQILKSCLDDLKL
TIDSMEPVEADLLLLLATLRFRLEPRLEGTGIALLWEVRKLPTLTWLDPSSALHILRIVQESIANILHHTQASEIRVGTA
VESTGVLVSIVDNGRGFDVEKTLAAGKGNGLRNLQRRAQAIDGTVRWTSGPEGTQFTLWLPLERHV

Sequences:

>Translated_626_residues
MALLVIVGAIYLDADGESFPAANLHLTQAEWQVTDARGFTTPSATLDSQSLPNAWRHVALPLDLPIALLRQAHANAITTA
GQTTWLRLAVPPLPPHSGPLALYGIRVKTDGTIAVYVNGELVHRAQQQGPLWNSTRTPLWVVLERHADDAPVREILIRLE
HTERTQVALSSLWLGPVETLRVRYHVRQWLQQELPRMLSAAFLAVGIFALFVWFKRRHETGYLLFFNLAVTSFLRGLHFY
ADLPIANDGFAWLTVNSLLWLVTVVHFFLCQLHGRALTWFTRALVGMTGLIGVLTLPGLAVLPNTPKVTPLIYPMAALMG
AAVGLVGGISAWRRSNEGVLVAIGVSVCTLLGVSDWLLQNNFVSPEGWYFGAYTNAITFGIFGILMYRRYVNAISEVELT
NANLAQRLKHREAELESSHQRLRAAERQQAISAERQRLMQDMHDGLGASLISAIRSVERGAVSDAKVSQILKSCLDDLKL
TIDSMEPVEADLLLLLATLRFRLEPRLEGTGIALLWEVRKLPTLTWLDPSSALHILRIVQESIANILHHTQASEIRVGTA
VESTGVLVSIVDNGRGFDVEKTLAAGKGNGLRNLQRRAQAIDGTVRWTSGPEGTQFTLWLPLERHV
>Mature_625_residues
ALLVIVGAIYLDADGESFPAANLHLTQAEWQVTDARGFTTPSATLDSQSLPNAWRHVALPLDLPIALLRQAHANAITTAG
QTTWLRLAVPPLPPHSGPLALYGIRVKTDGTIAVYVNGELVHRAQQQGPLWNSTRTPLWVVLERHADDAPVREILIRLEH
TERTQVALSSLWLGPVETLRVRYHVRQWLQQELPRMLSAAFLAVGIFALFVWFKRRHETGYLLFFNLAVTSFLRGLHFYA
DLPIANDGFAWLTVNSLLWLVTVVHFFLCQLHGRALTWFTRALVGMTGLIGVLTLPGLAVLPNTPKVTPLIYPMAALMGA
AVGLVGGISAWRRSNEGVLVAIGVSVCTLLGVSDWLLQNNFVSPEGWYFGAYTNAITFGIFGILMYRRYVNAISEVELTN
ANLAQRLKHREAELESSHQRLRAAERQQAISAERQRLMQDMHDGLGASLISAIRSVERGAVSDAKVSQILKSCLDDLKLT
IDSMEPVEADLLLLLATLRFRLEPRLEGTGIALLWEVRKLPTLTWLDPSSALHILRIVQESIANILHHTQASEIRVGTAV
ESTGVLVSIVDNGRGFDVEKTLAAGKGNGLRNLQRRAQAIDGTVRWTSGPEGTQFTLWLPLERHV

Specific function: Member of the two-component regulatory system ydfH/ydfI. May activate ydfI by phosphorylation [H]

COG id: COG4585

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR000014
- InterPro:   IPR011712 [H]

Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 69268; Mature: 69137

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLVIVGAIYLDADGESFPAANLHLTQAEWQVTDARGFTTPSATLDSQSLPNAWRHVAL
CEEEEEEEEEEECCCCCCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCHHHEEEC
PLDLPIALLRQAHANAITTAGQTTWLRLAVPPLPPHSGPLALYGIRVKTDGTIAVYVNGE
CCCHHHHHHHHHHCCCEECCCCCEEEEEEECCCCCCCCCEEEEEEEEECCCEEEEEECCH
LVHRAQQQGPLWNSTRTPLWVVLERHADDAPVREILIRLEHTERTQVALSSLWLGPVETL
HHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHH
RVRYHVRQWLQQELPRMLSAAFLAVGIFALFVWFKRRHETGYLLFFNLAVTSFLRGLHFY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHH
ADLPIANDGFAWLTVNSLLWLVTVVHFFLCQLHGRALTWFTRALVGMTGLIGVLTLPGLA
CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEE
VLPNTPKVTPLIYPMAALMGAAVGLVGGISAWRRSNEGVLVAIGVSVCTLLGVSDWLLQN
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCHHHHHHC
NFVSPEGWYFGAYTNAITFGIFGILMYRRYVNAISEVELTNANLAQRLKHREAELESSHQ
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHH
RLRAAERQQAISAERQRLMQDMHDGLGASLISAIRSVERGAVSDAKVSQILKSCLDDLKL
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHE
TIDSMEPVEADLLLLLATLRFRLEPRLEGTGIALLWEVRKLPTLTWLDPSSALHILRIVQ
ECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHCCEEEEECCHHHHHHHHHHH
ESIANILHHTQASEIRVGTAVESTGVLVSIVDNGRGFDVEKTLAAGKGNGLRNLQRRAQA
HHHHHHHHCCCCCCEEECCEECCCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHH
IDGTVRWTSGPEGTQFTLWLPLERHV
HCCEEEECCCCCCCEEEEEECCCCCC
>Mature Secondary Structure 
ALLVIVGAIYLDADGESFPAANLHLTQAEWQVTDARGFTTPSATLDSQSLPNAWRHVAL
EEEEEEEEEEECCCCCCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCHHHEEEC
PLDLPIALLRQAHANAITTAGQTTWLRLAVPPLPPHSGPLALYGIRVKTDGTIAVYVNGE
CCCHHHHHHHHHHCCCEECCCCCEEEEEEECCCCCCCCCEEEEEEEEECCCEEEEEECCH
LVHRAQQQGPLWNSTRTPLWVVLERHADDAPVREILIRLEHTERTQVALSSLWLGPVETL
HHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHH
RVRYHVRQWLQQELPRMLSAAFLAVGIFALFVWFKRRHETGYLLFFNLAVTSFLRGLHFY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHH
ADLPIANDGFAWLTVNSLLWLVTVVHFFLCQLHGRALTWFTRALVGMTGLIGVLTLPGLA
CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEE
VLPNTPKVTPLIYPMAALMGAAVGLVGGISAWRRSNEGVLVAIGVSVCTLLGVSDWLLQN
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCHHHHHHC
NFVSPEGWYFGAYTNAITFGIFGILMYRRYVNAISEVELTNANLAQRLKHREAELESSHQ
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHH
RLRAAERQQAISAERQRLMQDMHDGLGASLISAIRSVERGAVSDAKVSQILKSCLDDLKL
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHE
TIDSMEPVEADLLLLLATLRFRLEPRLEGTGIALLWEVRKLPTLTWLDPSSALHILRIVQ
ECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHCCEEEEECCHHHHHHHHHHH
ESIANILHHTQASEIRVGTAVESTGVLVSIVDNGRGFDVEKTLAAGKGNGLRNLQRRAQA
HHHHHHHHCCCCCCEEECCEECCCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHH
IDGTVRWTSGPEGTQFTLWLPLERHV
HCCEEEECCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]