| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is eutB [H]
Identifier: 17547846
GI number: 17547846
Start: 3371424
End: 3372818
Strand: Reverse
Name: eutB [H]
Synonym: RSc3127
Alternate gene names: 17547846
Gene position: 3372818-3371424 (Counterclockwise)
Preceding gene: 17547847
Following gene: 17547845
Centisome position: 90.75
GC content: 70.25
Gene sequence:
>1395_bases ATGGCCCGTTTCTCCCACACCCTCGGTCACGAGACCTACCGCTTCGACAACCTGCGGGACGTGCTGGCCAAGGCCAGCCC GGCCCGTTCCGGCGATGCGCTGGCCGGCATCGCGGCGGCCAGCGCGGCCGAGCGCGTGGCGGCGCAGATGGCGCTGGCCG AGATCCCGCTGAGGCACTTCCTCGATGAAGCCGTCATCCCGTACGAGGCGGACGAGGTCACCCGGCTGATCGTCGACACG CACGATGCGGCCGCCTTCGCGCCGGTCAGCCACCTCACCGTCGGCGATTTCCGCGACTGGCTGCTGGGCGATGCGGCGGA CGAAGCCGCGCTGGCCGCGCTGGCGCCGGGCCTGACGCCCGAGATGGCGGCGGCGGTGTCCAAGCTGATGCGGGTGCAGG ACCTGATCCTGGTGGCGCAGAAGACGCGCGTGGTCACGCGCTTTCGCAACACCATCGGCCTGCGCGGGCGCATGGCCACG CGCCTGCAGCCCAACCACCCGACCGACGACCCGGCCGGCATTGCCGCCAGCCTGCTCGACGGCCTGATGTACGGCAGCGG CGATGCGGTGATCGGCGTCAATCCGGTGTCCGACAGCACCGCTGCCATCTGCGACCTGCTGGGGATGCTCGACGCCGTGA TCCGGCGCTACGACATTCCCACCCAGGCCTGCGTGCTGACGCACGTGACGACCACCCTCGAGGCGATCCGTCGCGGCATG CCGGTGGACCTCGTGTTCCAGTCCATCGCCGGCACCGAGGCGGCCAATGCGAGCTTTGGCGTGAGCCTGGCGCTGCTGCA CGAGGCGCGCGACGCGGCGCTTGGCCTGCAACGCGGCACCGTGGGCGACAACGTGATGTATTTCGAGACCGGCCAGGGCA GCGCGCTGTCGGCCAACGCGCACCACGGCGTCGACCAGCAGACCTGCGAGGCGCGTGCCTACGCGGTGGCGCGGCGCTTC CGGCCGTTGCTGGTCAACACCGTGGTCGGCTTCATCGGGCCGGAGTACCTGTACGACGGCAAGCAGATCCTGCGCGCGGG GCTGGAGGACCACTTCTGCGGCAAGCTGCTCGGCGTGCCGATGGGCTGCGACATCTGCTACACCAACCACGCCGAGGCCG ACCAGGACGACATGGACACGCTGCTCACGCTGCTGGGCGCGGCCGGAGTCAACTACATCATGGGCATTCCCGGCTCCGAC GACGTGATGCTGAACTACCAGACCACCTCGTTCCACGATGCGCTCTACGTGCGCCGCGTGCTCGGCCTGCGGCCCGCGCC GGAATTCGAGGATTGGCTCGCGCGCATGGGCATCTGCACGGCGGGCGATGGCCGCATCGCCCTGGCCGACGGTCTGCCCG ATCCGTTCCGCCGGGCGGTGGCGCAACTGGCATGA
Upstream 100 bases:
>100_bases CGCTCGGCTTTTTCTGATTCTGCGGTGCCGGGGCCATGCCGGCCGACCATCGCCGTGCCAACGGTGCTAGCCTTGATCGG AATCCCGGTGGAGGCTTGGC
Downstream 100 bases:
>100_bases GGCGCGCGATGACCGACGAACGCGACGACACGCCCGCCACCGTGACGCAGAACCCCTGGCAGGCACTGCGCCGTCTGACG CCCGCCCGCATCGCCCTGGG
Product: ethanolamine ammonia-lyase heavy chain protein
Products: NA
Alternate protein names: Ethanolamine ammonia-lyase large subunit [H]
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MARFSHTLGHETYRFDNLRDVLAKASPARSGDALAGIAAASAAERVAAQMALAEIPLRHFLDEAVIPYEADEVTRLIVDT HDAAAFAPVSHLTVGDFRDWLLGDAADEAALAALAPGLTPEMAAAVSKLMRVQDLILVAQKTRVVTRFRNTIGLRGRMAT RLQPNHPTDDPAGIAASLLDGLMYGSGDAVIGVNPVSDSTAAICDLLGMLDAVIRRYDIPTQACVLTHVTTTLEAIRRGM PVDLVFQSIAGTEAANASFGVSLALLHEARDAALGLQRGTVGDNVMYFETGQGSALSANAHHGVDQQTCEARAYAVARRF RPLLVNTVVGFIGPEYLYDGKQILRAGLEDHFCGKLLGVPMGCDICYTNHAEADQDDMDTLLTLLGAAGVNYIMGIPGSD DVMLNYQTTSFHDALYVRRVLGLRPAPEFEDWLARMGICTAGDGRIALADGLPDPFRRAVAQLA
Sequences:
>Translated_464_residues MARFSHTLGHETYRFDNLRDVLAKASPARSGDALAGIAAASAAERVAAQMALAEIPLRHFLDEAVIPYEADEVTRLIVDT HDAAAFAPVSHLTVGDFRDWLLGDAADEAALAALAPGLTPEMAAAVSKLMRVQDLILVAQKTRVVTRFRNTIGLRGRMAT RLQPNHPTDDPAGIAASLLDGLMYGSGDAVIGVNPVSDSTAAICDLLGMLDAVIRRYDIPTQACVLTHVTTTLEAIRRGM PVDLVFQSIAGTEAANASFGVSLALLHEARDAALGLQRGTVGDNVMYFETGQGSALSANAHHGVDQQTCEARAYAVARRF RPLLVNTVVGFIGPEYLYDGKQILRAGLEDHFCGKLLGVPMGCDICYTNHAEADQDDMDTLLTLLGAAGVNYIMGIPGSD DVMLNYQTTSFHDALYVRRVLGLRPAPEFEDWLARMGICTAGDGRIALADGLPDPFRRAVAQLA >Mature_463_residues ARFSHTLGHETYRFDNLRDVLAKASPARSGDALAGIAAASAAERVAAQMALAEIPLRHFLDEAVIPYEADEVTRLIVDTH DAAAFAPVSHLTVGDFRDWLLGDAADEAALAALAPGLTPEMAAAVSKLMRVQDLILVAQKTRVVTRFRNTIGLRGRMATR LQPNHPTDDPAGIAASLLDGLMYGSGDAVIGVNPVSDSTAAICDLLGMLDAVIRRYDIPTQACVLTHVTTTLEAIRRGMP VDLVFQSIAGTEAANASFGVSLALLHEARDAALGLQRGTVGDNVMYFETGQGSALSANAHHGVDQQTCEARAYAVARRFR PLLVNTVVGFIGPEYLYDGKQILRAGLEDHFCGKLLGVPMGCDICYTNHAEADQDDMDTLLTLLGAAGVNYIMGIPGSDD VMLNYQTTSFHDALYVRRVLGLRPAPEFEDWLARMGICTAGDGRIALADGLPDPFRRAVAQLA
Specific function: Ethanolamine utilization. [C]
COG id: COG4303
COG function: function code E; Ethanolamine ammonia-lyase, large subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082106, Length=454, Percent_Identity=51.3215859030837, Blast_Score=461, Evalue=1e-131,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR010628 [H]
Pfam domain/function: PF06751 EutB [H]
EC number: =4.3.1.7 [H]
Molecular weight: Translated: 49596; Mature: 49465
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARFSHTLGHETYRFDNLRDVLAKASPARSGDALAGIAAASAAERVAAQMALAEIPLRHF CCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDEAVIPYEADEVTRLIVDTHDAAAFAPVSHLTVGDFRDWLLGDAADEAALAALAPGLTP HHHCCCCCCHHHHHHHHHCCCCCHHHCCHHHCCHHHHHHHHHCCCCHHHHHHHHCCCCCH EMAAAVSKLMRVQDLILVAQKTRVVTRFRNTIGLRGRMATRLQPNHPTDDPAGIAASLLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCHHHHHHHHHH GLMYGSGDAVIGVNPVSDSTAAICDLLGMLDAVIRRYDIPTQACVLTHVTTTLEAIRRGM HHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC PVDLVFQSIAGTEAANASFGVSLALLHEARDAALGLQRGTVGDNVMYFETGQGSALSANA CHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEECCC HHGVDQQTCEARAYAVARRFRPLLVNTVVGFIGPEYLYDGKQILRAGLEDHFCGKLLGVP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHCCCHHHHHHHHCCC MGCDICYTNHAEADQDDMDTLLTLLGAAGVNYIMGIPGSDDVMLNYQTTSFHDALYVRRV CCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCHHHHHHHHHH LGLRPAPEFEDWLARMGICTAGDGRIALADGLPDPFRRAVAQLA HCCCCCCCHHHHHHHCCCEECCCCCEEEECCCCCHHHHHHHHCC >Mature Secondary Structure ARFSHTLGHETYRFDNLRDVLAKASPARSGDALAGIAAASAAERVAAQMALAEIPLRHF CCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDEAVIPYEADEVTRLIVDTHDAAAFAPVSHLTVGDFRDWLLGDAADEAALAALAPGLTP HHHCCCCCCHHHHHHHHHCCCCCHHHCCHHHCCHHHHHHHHHCCCCHHHHHHHHCCCCCH EMAAAVSKLMRVQDLILVAQKTRVVTRFRNTIGLRGRMATRLQPNHPTDDPAGIAASLLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCHHHHHHHHHH GLMYGSGDAVIGVNPVSDSTAAICDLLGMLDAVIRRYDIPTQACVLTHVTTTLEAIRRGM HHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC PVDLVFQSIAGTEAANASFGVSLALLHEARDAALGLQRGTVGDNVMYFETGQGSALSANA CHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEECCC HHGVDQQTCEARAYAVARRFRPLLVNTVVGFIGPEYLYDGKQILRAGLEDHFCGKLLGVP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHCCCHHHHHHHHCCC MGCDICYTNHAEADQDDMDTLLTLLGAAGVNYIMGIPGSDDVMLNYQTTSFHDALYVRRV CCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCHHHHHHHHHH LGLRPAPEFEDWLARMGICTAGDGRIALADGLPDPFRRAVAQLA HCCCCCCCHHHHHHHCCCEECCCCCEEEECCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]