| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17547817
Identifier: 17547817
GI number: 17547817
Start: 3336227
End: 3336922
Strand: Direct
Name: 17547817
Synonym: RSc3098
Alternate gene names: NA
Gene position: 3336227-3336922 (Clockwise)
Preceding gene: 17547814
Following gene: 17547818
Centisome position: 89.77
GC content: 67.67
Gene sequence:
>696_bases GTGAACCCGCTCGAACTGAGCAAGGCCATCGGCGTCGTCACCCAGGACGACATCGACAAGACCGAAGCGGCGCAAGGCTC GCCGCGAACCACCGTGCTGGTGCGCGAGCTCGCCGCGCATCATCGGTCGCGCCTGCTCAAGCACCTGCTCGCCCTGGGCG ACGAGGACCGCCTGCTGCGCTTCGGCCAGGTGGTGGGCAATCACGTCATCGAAGCCTATGTCGACAGCATCGATTTCGAC CACGACAAAGTGTTCGGCGTCTATGACGACCGCCTGACCCTGGTCGGCGTCGGCCACCTCGCTTACCTGCGCGACAACCC GCAGGGCCGGGTGGCGGAGTTCGGCGTGTCGGTGCTGGAGTCCGCGCGCGGCAAGGGCGTCGGCAGCGCGCTGTTCCAGC GGGCGGCCATGCACGGCCGCAACACCAAGGTGCGCACGCTCTATATGCACTGCCTGTCGCGCAACGCGGCCATGATGCAC ATCGCCAAGAAGGCCGGCATGCGCGTGCAGTACGCCTACGGCGAGGCCGATGCCTACCTGGAGCTGCCGCCGGCCGACAC CATGAGCCTGCTGACCGAGGCGATCGACGGACAGGTCGCCGACCTCGACTACCTGCTCAAGCGCAACCTGCGCGACGTGC GCCGCTTCGGCCAACGCTTCTGGCGTTCGCTGCTGCCGCTCAAGCGCACCGTCTGA
Upstream 100 bases:
>100_bases CAACACGCAAACACACCCGCTTGCGTGGACACGGGGTACCACCGGCGCCTCGTCTCATGATCCGCCGCCCACCGGGCCGG CACTGAAAGGAAACGCTGTC
Downstream 100 bases:
>100_bases TTCCGCGGCGCCTCTGCCCGCCGCCGCCAAGCAAGACGCCCGGACTGTCCGGGCGTTTTTTTTCGTCCGCGCGGCACATC GTCTGCCTAGAGCAATTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase GNAT Family; Histone Acetyltransferase HPA2-Like Acetyltransferase; Acetyltransferase GNAT Family Protein; Histone Acetyltransferase HPA2 Protein
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MNPLELSKAIGVVTQDDIDKTEAAQGSPRTTVLVRELAAHHRSRLLKHLLALGDEDRLLRFGQVVGNHVIEAYVDSIDFD HDKVFGVYDDRLTLVGVGHLAYLRDNPQGRVAEFGVSVLESARGKGVGSALFQRAAMHGRNTKVRTLYMHCLSRNAAMMH IAKKAGMRVQYAYGEADAYLELPPADTMSLLTEAIDGQVADLDYLLKRNLRDVRRFGQRFWRSLLPLKRTV
Sequences:
>Translated_231_residues MNPLELSKAIGVVTQDDIDKTEAAQGSPRTTVLVRELAAHHRSRLLKHLLALGDEDRLLRFGQVVGNHVIEAYVDSIDFD HDKVFGVYDDRLTLVGVGHLAYLRDNPQGRVAEFGVSVLESARGKGVGSALFQRAAMHGRNTKVRTLYMHCLSRNAAMMH IAKKAGMRVQYAYGEADAYLELPPADTMSLLTEAIDGQVADLDYLLKRNLRDVRRFGQRFWRSLLPLKRTV >Mature_231_residues MNPLELSKAIGVVTQDDIDKTEAAQGSPRTTVLVRELAAHHRSRLLKHLLALGDEDRLLRFGQVVGNHVIEAYVDSIDFD HDKVFGVYDDRLTLVGVGHLAYLRDNPQGRVAEFGVSVLESARGKGVGSALFQRAAMHGRNTKVRTLYMHCLSRNAAMMH IAKKAGMRVQYAYGEADAYLELPPADTMSLLTEAIDGQVADLDYLLKRNLRDVRRFGQRFWRSLLPLKRTV
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25868; Mature: 25868
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPLELSKAIGVVTQDDIDKTEAAQGSPRTTVLVRELAAHHRSRLLKHLLALGDEDRLLR CCHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH FGQVVGNHVIEAYVDSIDFDHDKVFGVYDDRLTLVGVGHLAYLRDNPQGRVAEFGVSVLE HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCEEEECCCCCCHHHHHHHHHHH SARGKGVGSALFQRAAMHGRNTKVRTLYMHCLSRNAAMMHIAKKAGMRVQYAYGEADAYL HHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEECCCCCEE ELPPADTMSLLTEAIDGQVADLDYLLKRNLRDVRRFGQRFWRSLLPLKRTV ECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNPLELSKAIGVVTQDDIDKTEAAQGSPRTTVLVRELAAHHRSRLLKHLLALGDEDRLLR CCHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH FGQVVGNHVIEAYVDSIDFDHDKVFGVYDDRLTLVGVGHLAYLRDNPQGRVAEFGVSVLE HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCEEEECCCCCCHHHHHHHHHHH SARGKGVGSALFQRAAMHGRNTKVRTLYMHCLSRNAAMMHIAKKAGMRVQYAYGEADAYL HHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEECCCCCEE ELPPADTMSLLTEAIDGQVADLDYLLKRNLRDVRRFGQRFWRSLLPLKRTV ECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA