| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17547813
Identifier: 17547813
GI number: 17547813
Start: 3331563
End: 3332357
Strand: Direct
Name: 17547813
Synonym: RSc3094
Alternate gene names: NA
Gene position: 3331563-3332357 (Clockwise)
Preceding gene: 17547811
Following gene: 17547814
Centisome position: 89.64
GC content: 69.06
Gene sequence:
>795_bases ATGCAATACATCCATGTCGTCAACGGCGATGTCGCCGGCGCCGCGCTCAAGCAGGCGCTTGCCCAGGCCGGCCGCCCCGA TTCCGTTGTGGTTCTGCGCGACGATCTCGCCGTCGGGCCGCTGGCCGACGTCGACGGCGTTGCCATGGCGCGCTCCGGTT TCTGGCAGCGCGTGGCGCCCAACAGCAATATCGATTTCGCCAGCGAGATGCACGGCGCGCTGGCGTCGCTGGCCGAGCTG CGCGAATCGACCACCGAAGTGGCGATCTGGCACGGCCAGAGCGCGTCGGACCAGCTGATGCTGCGCCGGGTGGCATTCCA CCTGCACCAGGCGCCGCAGCGGATCAACGAAATCGGCATGGACGTGCGTGAGCTGGACCTGCCCGGCGCCCAAGGCGCGC TCACGACCATCGGCATGTATCCGGGCGCCCGGCTGGCCCGGCGCTTTTCCACGATCGCGCCGGTGTCGGTGCTGCGCATC GGCCGGCTGGCCTACGAATGGCAGCAGACCGTGCGCGAAAACGCCGACGTGCGCCTGTGGAAGGGCAACACCCTGGTGCC GGTGTCATACGCCACCGTGGACGAAGTGATCCTGGAGCACGTGCCGACGGACTGGGCCTCCGCGCGCGACGTGGTCGCCA GCATCATGGGCGCCATCGACGGGCTGCTGGCCAGCGACTGGTTCGTGTTCTGGCGCTGCCGCGAACTGGTCGGCAGCGGG CAACTGCTGCTGCGCGGCGAGGCCGACTCGCTGACCACCTGCGAACTGCGTCGCAACGTCAGCGTCGCCGTCTGA
Upstream 100 bases:
>100_bases GGATGGGGATGCGCGGGAAGATGACGCACCTCAAATGGAATATCGGCCGTGCTGAGCAAAACGACAGCATGCCCCCTGCA CAGTCGCTACAATTGCCGCC
Downstream 100 bases:
>100_bases GCCCGATCCGTTCAAGTCCGGCCGGCCCGGGCCGTTGAAGGAAGAAGTCCGGCGCGCCGGCGCGCTGCTTCACGCCCTCC TTCATTCTTCACCGACTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MQYIHVVNGDVAGAALKQALAQAGRPDSVVVLRDDLAVGPLADVDGVAMARSGFWQRVAPNSNIDFASEMHGALASLAEL RESTTEVAIWHGQSASDQLMLRRVAFHLHQAPQRINEIGMDVRELDLPGAQGALTTIGMYPGARLARRFSTIAPVSVLRI GRLAYEWQQTVRENADVRLWKGNTLVPVSYATVDEVILEHVPTDWASARDVVASIMGAIDGLLASDWFVFWRCRELVGSG QLLLRGEADSLTTCELRRNVSVAV
Sequences:
>Translated_264_residues MQYIHVVNGDVAGAALKQALAQAGRPDSVVVLRDDLAVGPLADVDGVAMARSGFWQRVAPNSNIDFASEMHGALASLAEL RESTTEVAIWHGQSASDQLMLRRVAFHLHQAPQRINEIGMDVRELDLPGAQGALTTIGMYPGARLARRFSTIAPVSVLRI GRLAYEWQQTVRENADVRLWKGNTLVPVSYATVDEVILEHVPTDWASARDVVASIMGAIDGLLASDWFVFWRCRELVGSG QLLLRGEADSLTTCELRRNVSVAV >Mature_264_residues MQYIHVVNGDVAGAALKQALAQAGRPDSVVVLRDDLAVGPLADVDGVAMARSGFWQRVAPNSNIDFASEMHGALASLAEL RESTTEVAIWHGQSASDQLMLRRVAFHLHQAPQRINEIGMDVRELDLPGAQGALTTIGMYPGARLARRFSTIAPVSVLRI GRLAYEWQQTVRENADVRLWKGNTLVPVSYATVDEVILEHVPTDWASARDVVASIMGAIDGLLASDWFVFWRCRELVGSG QLLLRGEADSLTTCELRRNVSVAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28781; Mature: 28781
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYIHVVNGDVAGAALKQALAQAGRPDSVVVLRDDLAVGPLADVDGVAMARSGFWQRVAP CCEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCHHHCCC NSNIDFASEMHGALASLAELRESTTEVAIWHGQSASDQLMLRRVAFHLHQAPQRINEIGM CCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC DVRELDLPGAQGALTTIGMYPGARLARRFSTIAPVSVLRIGRLAYEWQQTVRENADVRLW CHHCCCCCCCCCCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE KGNTLVPVSYATVDEVILEHVPTDWASARDVVASIMGAIDGLLASDWFVFWRCRELVGSG ECCEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QLLLRGEADSLTTCELRRNVSVAV CEEEECCCCCCCHHHHHCCCEECC >Mature Secondary Structure MQYIHVVNGDVAGAALKQALAQAGRPDSVVVLRDDLAVGPLADVDGVAMARSGFWQRVAP CCEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCHHHCCC NSNIDFASEMHGALASLAELRESTTEVAIWHGQSASDQLMLRRVAFHLHQAPQRINEIGM CCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC DVRELDLPGAQGALTTIGMYPGARLARRFSTIAPVSVLRIGRLAYEWQQTVRENADVRLW CHHCCCCCCCCCCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE KGNTLVPVSYATVDEVILEHVPTDWASARDVVASIMGAIDGLLASDWFVFWRCRELVGSG ECCEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QLLLRGEADSLTTCELRRNVSVAV CEEEECCCCCCCHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA