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The map label for this gene is kdpE [H]

Identifier: 17547806

GI number: 17547806

Start: 3324532

End: 3325236

Strand: Direct

Name: kdpE [H]

Synonym: RSc3087

Alternate gene names: 17547806

Gene position: 3324532-3325236 (Clockwise)

Preceding gene: 17547805

Following gene: 17547811

Centisome position: 89.46

GC content: 70.5

Gene sequence:

>705_bases
ATGCGTGCCATGGCCTTCACCTTCACACCCACCGTCCTGGTCATCGATGACGAACCGCACATCCGGCGCTTCGTACGCGC
GGCGTTGGAGGCCGAAGGCTGCGAGGTGTTCGAGGCCGACCGCGTCGCGCGCGGCCTGATCGAGGCCGGCACGCGGCAGC
CCGATGCCGTGATCCTCGATCTCGGCCTGCCCGACGGCGACGGCATGTCGTTGATCCGCGACCTGCGCACGTGGACGGAA
GTGCCGGTGCTGGTCCTGTCCGCCCGTGTCGACGAGCGCGACAAGATCGACGCCCTCGACGCCGGCGCCGATGACTACCT
GACCAAACCCTTCGGCGTGGGCGAGCTGATCGCCCGCCTGCGCGTGCTGCTGCGCCGCCATGCCAAGCGCGGCGAAGACG
GCGGCAGCATCATCGCCTTCGGCGACGTGCAGGTCGACCTGGCCCGCCGCCTGGTCAGCCGCAACGGCGAGCCGGTGCAC
CTGACGCCGATCGAATACCGCCTGCTGGCCGTGCTGCTCGGCCGGCGCGGCACCGTGATGACCCATCGCGAACTGCTGCG
CGAGGTCTGGGGCCCGGCGCATTCGGACAGCAGCCACTACCTGCGCATCTACATGGGCCACCTGCGCCACAAGCTGGAGC
GCGACCCGGCGCGCCCGCAGCACCTGCTGACCGAAGTCGGCGTCGGCTACCGCTTCGCCGCCTGA

Upstream 100 bases:

>100_bases
TGGGCGAAGAAAGCCTGAGCGCCGTCCACCCGCGCGGCAAGCGACAACGGACCCTGCGGGGTCCGTTGTCATTGGTGCGC
CGGAAAGGGACGGATTTACA

Downstream 100 bases:

>100_bases
GCCTTACTGCTCCCGGATACCGGCCGCGTGCACGATGCGGCCGTTGCTGTCGTATTCCGCGCGGATGGCGGCGGCGAACT
GCTCGGGCGTGCCGCCCACC

Product: response regulator transcription regulator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MRAMAFTFTPTVLVIDDEPHIRRFVRAALEAEGCEVFEADRVARGLIEAGTRQPDAVILDLGLPDGDGMSLIRDLRTWTE
VPVLVLSARVDERDKIDALDAGADDYLTKPFGVGELIARLRVLLRRHAKRGEDGGSIIAFGDVQVDLARRLVSRNGEPVH
LTPIEYRLLAVLLGRRGTVMTHRELLREVWGPAHSDSSHYLRIYMGHLRHKLERDPARPQHLLTEVGVGYRFAA

Sequences:

>Translated_234_residues
MRAMAFTFTPTVLVIDDEPHIRRFVRAALEAEGCEVFEADRVARGLIEAGTRQPDAVILDLGLPDGDGMSLIRDLRTWTE
VPVLVLSARVDERDKIDALDAGADDYLTKPFGVGELIARLRVLLRRHAKRGEDGGSIIAFGDVQVDLARRLVSRNGEPVH
LTPIEYRLLAVLLGRRGTVMTHRELLREVWGPAHSDSSHYLRIYMGHLRHKLERDPARPQHLLTEVGVGYRFAA
>Mature_234_residues
MRAMAFTFTPTVLVIDDEPHIRRFVRAALEAEGCEVFEADRVARGLIEAGTRQPDAVILDLGLPDGDGMSLIRDLRTWTE
VPVLVLSARVDERDKIDALDAGADDYLTKPFGVGELIARLRVLLRRHAKRGEDGGSIIAFGDVQVDLARRLVSRNGEPVH
LTPIEYRLLAVLLGRRGTVMTHRELLREVWGPAHSDSSHYLRIYMGHLRHKLERDPARPQHLLTEVGVGYRFAA

Specific function: Member of the two-component regulatory system kdpD/kdpE involved in the regulation of the kdp operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786911, Length=222, Percent_Identity=64.4144144144144, Blast_Score=293, Evalue=8e-81,
Organism=Escherichia coli, GI1787375, Length=223, Percent_Identity=37.219730941704, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI1790552, Length=227, Percent_Identity=37.4449339207048, Blast_Score=123, Evalue=8e-30,
Organism=Escherichia coli, GI1789809, Length=230, Percent_Identity=33.4782608695652, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1786599, Length=227, Percent_Identity=31.2775330396476, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1788394, Length=230, Percent_Identity=31.7391304347826, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1786784, Length=220, Percent_Identity=34.0909090909091, Blast_Score=110, Evalue=7e-26,
Organism=Escherichia coli, GI1790863, Length=232, Percent_Identity=32.7586206896552, Blast_Score=110, Evalue=9e-26,
Organism=Escherichia coli, GI87082012, Length=223, Percent_Identity=31.390134529148, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1790860, Length=221, Percent_Identity=34.3891402714932, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1789402, Length=223, Percent_Identity=33.6322869955157, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1787229, Length=229, Percent_Identity=30.5676855895196, Blast_Score=97, Evalue=6e-22,
Organism=Escherichia coli, GI2367329, Length=206, Percent_Identity=28.6407766990291, Blast_Score=87, Evalue=9e-19,
Organism=Escherichia coli, GI145693140, Length=232, Percent_Identity=26.7241379310345, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788550, Length=106, Percent_Identity=32.0754716981132, Blast_Score=68, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26240; Mature: 26240

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAMAFTFTPTVLVIDDEPHIRRFVRAALEAEGCEVFEADRVARGLIEAGTRQPDAVILD
CCCEEEEECCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEE
LGLPDGDGMSLIRDLRTWTEVPVLVLSARVDERDKIDALDAGADDYLTKPFGVGELIARL
CCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHCCCCCHHCCCCCCHHHHHHHH
RVLLRRHAKRGEDGGSIIAFGDVQVDLARRLVSRNGEPVHLTPIEYRLLAVLLGRRGTVM
HHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCCCCHH
THRELLREVWGPAHSDSSHYLRIYMGHLRHKLERDPARPQHLLTEVGVGYRFAA
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEECC
>Mature Secondary Structure
MRAMAFTFTPTVLVIDDEPHIRRFVRAALEAEGCEVFEADRVARGLIEAGTRQPDAVILD
CCCEEEEECCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEE
LGLPDGDGMSLIRDLRTWTEVPVLVLSARVDERDKIDALDAGADDYLTKPFGVGELIARL
CCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHCCCCCHHCCCCCCHHHHHHHH
RVLLRRHAKRGEDGGSIIAFGDVQVDLARRLVSRNGEPVHLTPIEYRLLAVLLGRRGTVM
HHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCCCCHH
THRELLREVWGPAHSDSSHYLRIYMGHLRHKLERDPARPQHLLTEVGVGYRFAA
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1532388; 8905232; 9278503 [H]