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The map label for this gene is rcsB [H]

Identifier: 17547797

GI number: 17547797

Start: 3314560

End: 3315228

Strand: Direct

Name: rcsB [H]

Synonym: RSc3078

Alternate gene names: 17547797

Gene position: 3314560-3315228 (Clockwise)

Preceding gene: 17547795

Following gene: 17547798

Centisome position: 89.19

GC content: 69.96

Gene sequence:

>669_bases
ATGCAGGCCCCCGTCCGATTCGCGATCGCAGACGATCATCCCGGCGTGGTGGCCGCCGTGCGGCATCTCGTCTGCCGCGT
CGAGGGCTTCGAAGTGGTCGGCGAAGCCACCAGCGCGGATGGACTGCTCGCCCTGCTGGGGCGCGTGCACTGCGATGTGG
TCATCACCGACTACGCCATGCCGGCCAGCCGCCACGGCGACGGCATCGTCCTGCTCGAATTCCTGCTGCGGCGCCATCCC
GGGGTGCGCGTCGTGGTGCTGACCATGCTGGAAACCCACGCGGTGGTGGACCGCATGCTGCGCGCCGGCATTCGGGTCAT
CGCCAGCAAGGCCGACAGCCCGCACCATATCCTGGAGGGCGTCCATGCCGCGCTGGCAGGCCGCGCCTACCTGTCGCCAC
GGTTCGGGCCCCGGCTGGACAGCGCCCACCCCGGACACGCCCCCGACGACCACGGCGCGCTCGATCGGCTCGGCAAGCGC
GAACTCGAAGTCCTGCGCATGTATGTCGGCGGCGAGACCGTCAGCGAGATCGCCAGGCGGCTCAACCGCAGCGTCAAAAC
GATCAGCGCGCAGAAGCAGAAGAGCATGCGCAAGCTCAGGCTGGCCACCGAGGCGGCGCTGTTCGACTTCGCCGCGCAGC
ATGGCCTGCTCGGCACCACCGGGCGCTGA

Upstream 100 bases:

>100_bases
GAGTTTTCCGATAGGCCGACCGCACCGGTTGCGCGATGCTTGCCCGATCCAGCGGCAAATGGGTTGCCGCGCGTTCTGTC
CGTTCCGGAGACTTCTCGAC

Downstream 100 bases:

>100_bases
GCAACGTGATGGCCACGATGCTCCGGCGCGCCCTTCCGGCGCCTGCGCACCTCTGGCGGCGTGGCCGCACGGCCTTGCTG
CTGTGCGCCACCGCCATCGC

Product: response regulator transcription regulator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MQAPVRFAIADDHPGVVAAVRHLVCRVEGFEVVGEATSADGLLALLGRVHCDVVITDYAMPASRHGDGIVLLEFLLRRHP
GVRVVVLTMLETHAVVDRMLRAGIRVIASKADSPHHILEGVHAALAGRAYLSPRFGPRLDSAHPGHAPDDHGALDRLGKR
ELEVLRMYVGGETVSEIARRLNRSVKTISAQKQKSMRKLRLATEAALFDFAAQHGLLGTTGR

Sequences:

>Translated_222_residues
MQAPVRFAIADDHPGVVAAVRHLVCRVEGFEVVGEATSADGLLALLGRVHCDVVITDYAMPASRHGDGIVLLEFLLRRHP
GVRVVVLTMLETHAVVDRMLRAGIRVIASKADSPHHILEGVHAALAGRAYLSPRFGPRLDSAHPGHAPDDHGALDRLGKR
ELEVLRMYVGGETVSEIARRLNRSVKTISAQKQKSMRKLRLATEAALFDFAAQHGLLGTTGR
>Mature_222_residues
MQAPVRFAIADDHPGVVAAVRHLVCRVEGFEVVGEATSADGLLALLGRVHCDVVITDYAMPASRHGDGIVLLEFLLRRHP
GVRVVVLTMLETHAVVDRMLRAGIRVIASKADSPHHILEGVHAALAGRAYLSPRFGPRLDSAHPGHAPDDHGALDRLGKR
ELEVLRMYVGGETVSEIARRLNRSVKTISAQKQKSMRKLRLATEAALFDFAAQHGLLGTTGR

Specific function: Also stimulates ftsZ expression. This suggests that rcsB is a regulator implicated in the regulation of more than one cellular function [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788546, Length=202, Percent_Identity=34.6534653465347, Blast_Score=127, Evalue=4e-31,
Organism=Escherichia coli, GI1788712, Length=208, Percent_Identity=27.4038461538462, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1788222, Length=216, Percent_Identity=24.537037037037, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1790102, Length=203, Percent_Identity=30.5418719211823, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788521, Length=213, Percent_Identity=29.1079812206573, Blast_Score=68, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 24084; Mature: 24084

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAPVRFAIADDHPGVVAAVRHLVCRVEGFEVVGEATSADGLLALLGRVHCDVVITDYAM
CCCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHCEEEECCCC
PASRHGDGIVLLEFLLRRHPGVRVVVLTMLETHAVVDRMLRAGIRVIASKADSPHHILEG
CCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
VHAALAGRAYLSPRFGPRLDSAHPGHAPDDHGALDRLGKRELEVLRMYVGGETVSEIARR
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LNRSVKTISAQKQKSMRKLRLATEAALFDFAAQHGLLGTTGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQAPVRFAIADDHPGVVAAVRHLVCRVEGFEVVGEATSADGLLALLGRVHCDVVITDYAM
CCCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHCEEEECCCC
PASRHGDGIVLLEFLLRRHPGVRVVVLTMLETHAVVDRMLRAGIRVIASKADSPHHILEG
CCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
VHAALAGRAYLSPRFGPRLDSAHPGHAPDDHGALDRLGKRELEVLRMYVGGETVSEIARR
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LNRSVKTISAQKQKSMRKLRLATEAALFDFAAQHGLLGTTGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]