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The map label for this gene is ydfM [H]

Identifier: 17547796

GI number: 17547796

Start: 3313181

End: 3314359

Strand: Reverse

Name: ydfM [H]

Synonym: RSc3077

Alternate gene names: 17547796

Gene position: 3314359-3313181 (Counterclockwise)

Preceding gene: 17547799

Following gene: 17547793

Centisome position: 89.18

GC content: 73.28

Gene sequence:

>1179_bases
ATGACGTCTTCCTCGCCGCCCGCCATCCCGGCCGATGCCCGCAGACAGCACGCGGAGCGCACCACGCTGGTCAGCGCGGC
GGTCAATTGCGCGCTGTCGGCCGGGCAGATCGCGGCCGGGCTGTGGTCGCACTCGCAGGGGCTGGTGGCGGACGGGCTGC
ACACGCTGTCGGACCTGATCGCCGATGGCATCGTTTTCATCGCCAACCGCAACAGCCACAAGGGGCCGGACGAAGACCAC
CAGTACGGCCATGCGCGCTATGAAAACGCCGCATCGCTCGGCCTGGGCCTGCTGTTGATGGCCGCCGGCGCCGGCATGAT
CTGGTCGGCGCTCGCGAGCCTGAGCGCGCCGCACGGCGCGGCGCCGGTGCATGGGCTGGCCCTGTGGGTGGCGCTGGCGG
CGCTGGCCGCCAAGGAGGGGCTGTTCCGCTACATGCTGGCGGTGGCCAGGCGCATCGGTTCGCGCATGCTGGTCGCCAAC
GCGTGGCACGCGCGCTCGGACGCGGTGTCATCGCTGGTGGCGGCGGTCGGCGTGGCGGGCAACCTGATGGGGTTCCGCTG
GCTGGATCCGGTGGCGGCCTGCGTGGTGGGCGCGATGATCGGCCGGGTGGGCATCCGGTTCGGCTGGGAGGCGCTCAACG
ATCTGATGGACCGCGCGCTGCCGCCCGCGCAGGTGCAGGCTATCCGCGCCAGCCTGGCGGCCACGCCGGGCGTGATCAAT
GTCCACGACCTGCGCACGCGCGTGACGGGCGACCAGGCCCTGGTCGACGCGCACATCGAAGTGGATCCGCGCGTCTCCGT
CAGCGAGGGGCACGCGATCGCGGTGCGCGCGCGCGCCAATGTGCTGGCGGCCCATACGGCGATGGCGGTGCTCGACGTGC
AGCTCCACGTCGATCCGCGCGAGCGGGTCTACACCGATCCGCTGCCGCTGCCCGACCGCGATGCGCTGTGCGCCGTGCTG
GCGCAGGCGCTGCCGCCGGGCACGCCGCTCGATGCACGGCATTGCCTGCTGCACTACGTCGAGGGCGGGGTGGAGGTCGA
TCTGATCCTGCCGCCGTCATTGGCGGACCACGCGGCGCCGGTGGCCGAGACCGTGCGGGCGCGCTGGCATGGGCGGGTGC
GGCTGCGCGCGCTGACCGCCGCGTCGGGCGCCACGGCCCGGGGCCCAGTCCGACCCTAG

Upstream 100 bases:

>100_bases
TGATTCGTGCGGACGGAACGTAAGGCGGGGCGGCGCCGTGCCGGCGGGGCTGCGTGGCACAATGTCCTCGCGCCTGTTCC
CTCGTTCTCCTTTTCCGTCC

Downstream 100 bases:

>100_bases
CGGCACTGGTCGATCGCATTGGCCGGCTGGACCCTGGCGGGGTCGAAGCGCAGCTGTTCCAGTCCCTGTTCCGTCAGCGA
TAGCCAGTCGAGCGCGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MTSSSPPAIPADARRQHAERTTLVSAAVNCALSAGQIAAGLWSHSQGLVADGLHTLSDLIADGIVFIANRNSHKGPDEDH
QYGHARYENAASLGLGLLLMAAGAGMIWSALASLSAPHGAAPVHGLALWVALAALAAKEGLFRYMLAVARRIGSRMLVAN
AWHARSDAVSSLVAAVGVAGNLMGFRWLDPVAACVVGAMIGRVGIRFGWEALNDLMDRALPPAQVQAIRASLAATPGVIN
VHDLRTRVTGDQALVDAHIEVDPRVSVSEGHAIAVRARANVLAAHTAMAVLDVQLHVDPRERVYTDPLPLPDRDALCAVL
AQALPPGTPLDARHCLLHYVEGGVEVDLILPPSLADHAAPVAETVRARWHGRVRLRALTAASGATARGPVRP

Sequences:

>Translated_392_residues
MTSSSPPAIPADARRQHAERTTLVSAAVNCALSAGQIAAGLWSHSQGLVADGLHTLSDLIADGIVFIANRNSHKGPDEDH
QYGHARYENAASLGLGLLLMAAGAGMIWSALASLSAPHGAAPVHGLALWVALAALAAKEGLFRYMLAVARRIGSRMLVAN
AWHARSDAVSSLVAAVGVAGNLMGFRWLDPVAACVVGAMIGRVGIRFGWEALNDLMDRALPPAQVQAIRASLAATPGVIN
VHDLRTRVTGDQALVDAHIEVDPRVSVSEGHAIAVRARANVLAAHTAMAVLDVQLHVDPRERVYTDPLPLPDRDALCAVL
AQALPPGTPLDARHCLLHYVEGGVEVDLILPPSLADHAAPVAETVRARWHGRVRLRALTAASGATARGPVRP
>Mature_391_residues
TSSSPPAIPADARRQHAERTTLVSAAVNCALSAGQIAAGLWSHSQGLVADGLHTLSDLIADGIVFIANRNSHKGPDEDHQ
YGHARYENAASLGLGLLLMAAGAGMIWSALASLSAPHGAAPVHGLALWVALAALAAKEGLFRYMLAVARRIGSRMLVANA
WHARSDAVSSLVAAVGVAGNLMGFRWLDPVAACVVGAMIGRVGIRFGWEALNDLMDRALPPAQVQAIRASLAATPGVINV
HDLRTRVTGDQALVDAHIEVDPRVSVSEGHAIAVRARANVLAAHTAMAVLDVQLHVDPRERVYTDPLPLPDRDALCAVLA
QALPPGTPLDARHCLLHYVEGGVEVDLILPPSLADHAAPVAETVRARWHGRVRLRALTAASGATARGPVRP

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=266, Percent_Identity=25.9398496240602, Blast_Score=92, Evalue=7e-20,
Organism=Saccharomyces cerevisiae, GI6325032, Length=234, Percent_Identity=28.6324786324786, Blast_Score=112, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6323831, Length=230, Percent_Identity=30.4347826086957, Blast_Score=96, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 41068; Mature: 40936

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSSPPAIPADARRQHAERTTLVSAAVNCALSAGQIAAGLWSHSQGLVADGLHTLSDLI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHH
ADGIVFIANRNSHKGPDEDHQYGHARYENAASLGLGLLLMAAGAGMIWSALASLSAPHGA
HCCEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
APVHGLALWVALAALAAKEGLFRYMLAVARRIGSRMLVANAWHARSDAVSSLVAAVGVAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHH
NLMGFRWLDPVAACVVGAMIGRVGIRFGWEALNDLMDRALPPAQVQAIRASLAATPGVIN
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEE
VHDLRTRVTGDQALVDAHIEVDPRVSVSEGHAIAVRARANVLAAHTAMAVLDVQLHVDPR
HHHHHHHCCCCHHEEEEEEEECCCEEECCCCEEEEEEHHHHHHHHHHEEEEEEEEEECHH
ERVYTDPLPLPDRDALCAVLAQALPPGTPLDARHCLLHYVEGGVEVDLILPPSLADHAAP
HHEECCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHH
VAETVRARWHGRVRLRALTAASGATARGPVRP
HHHHHHHHHCCCEEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
TSSSPPAIPADARRQHAERTTLVSAAVNCALSAGQIAAGLWSHSQGLVADGLHTLSDLI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHH
ADGIVFIANRNSHKGPDEDHQYGHARYENAASLGLGLLLMAAGAGMIWSALASLSAPHGA
HCCEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
APVHGLALWVALAALAAKEGLFRYMLAVARRIGSRMLVANAWHARSDAVSSLVAAVGVAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHH
NLMGFRWLDPVAACVVGAMIGRVGIRFGWEALNDLMDRALPPAQVQAIRASLAATPGVIN
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEE
VHDLRTRVTGDQALVDAHIEVDPRVSVSEGHAIAVRARANVLAAHTAMAVLDVQLHVDPR
HHHHHHHCCCCHHEEEEEEEECCCEEECCCCEEEEEEHHHHHHHHHHEEEEEEEEEECHH
ERVYTDPLPLPDRDALCAVLAQALPPGTPLDARHCLLHYVEGGVEVDLILPPSLADHAAP
HHEECCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHH
VAETVRARWHGRVRLRALTAASGATARGPVRP
HHHHHHHHHCCCEEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]