| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is 17547791
Identifier: 17547791
GI number: 17547791
Start: 3310525
End: 3310950
Strand: Reverse
Name: 17547791
Synonym: RSc3072
Alternate gene names: NA
Gene position: 3310950-3310525 (Counterclockwise)
Preceding gene: 17547792
Following gene: 17547790
Centisome position: 89.09
GC content: 66.67
Gene sequence:
>426_bases ATGAAGACCAAAGCGTATCTCAGCAAACAGGAAATCTATGACGGGGCCGTCCGCCATCTGTTCGGGCAGGGCGGCGCCGC CATCCTGCCGCGTGGTGGGGCCGCGTACCACGGCCAGGGCGGCCGCTGCTGCCCGATCGGTAACCTGATCGGCGTGCGCG ACTACACCACGTCGATGGAAAGCGTGCCGGTGCGCTACATCCTCAAGCCGGCCAACGAGATCCCGCGCTACATGGATGCC GGCGTCACGGCGCTGCGCCGCGCGCTCAAGAAGGCCCGCATCGATGTGGACGACCGCGACACCGTGGAGCTGCTGTCCAA GCTGCAGAACGCCCATGACGTGTTCGGCACCTGGGAATGGAAGGAGCGCCTGCACTCGATCGCGCGCCAGTTCGGCCTGA GCGGCGCCGTGGTCGACGCGTTCTGA
Upstream 100 bases:
>100_bases GAACCAAGATAGGTCGTACGGATCGGCCTGTCCTCGCAGTCAGACCGGAAGCGAATCGGCGGCGTGCGCAGAAAGACCAG GGGTCAGGGGCACATCAAAA
Downstream 100 bases:
>100_bases GCGGTCCGCCCCGATCACCGCCCCGATCACCACAGAGCAGATGACCGCCATGGAAGGGAAGGCGACGCGCCTCGCCATCA AGGACCTGTTCGAGCGTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MKTKAYLSKQEIYDGAVRHLFGQGGAAILPRGGAAYHGQGGRCCPIGNLIGVRDYTTSMESVPVRYILKPANEIPRYMDA GVTALRRALKKARIDVDDRDTVELLSKLQNAHDVFGTWEWKERLHSIARQFGLSGAVVDAF
Sequences:
>Translated_141_residues MKTKAYLSKQEIYDGAVRHLFGQGGAAILPRGGAAYHGQGGRCCPIGNLIGVRDYTTSMESVPVRYILKPANEIPRYMDA GVTALRRALKKARIDVDDRDTVELLSKLQNAHDVFGTWEWKERLHSIARQFGLSGAVVDAF >Mature_141_residues MKTKAYLSKQEIYDGAVRHLFGQGGAAILPRGGAAYHGQGGRCCPIGNLIGVRDYTTSMESVPVRYILKPANEIPRYMDA GVTALRRALKKARIDVDDRDTVELLSKLQNAHDVFGTWEWKERLHSIARQFGLSGAVVDAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15591; Mature: 15591
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKAYLSKQEIYDGAVRHLFGQGGAAILPRGGAAYHGQGGRCCPIGNLIGVRDYTTSME CCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEECCCCCCCCCCCCCCCCCHHHCCHH SVPVRYILKPANEIPRYMDAGVTALRRALKKARIDVDDRDTVELLSKLQNAHDVFGTWEW HCCHHHEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHH KERLHSIARQFGLSGAVVDAF HHHHHHHHHHHCCCCCEECCC >Mature Secondary Structure MKTKAYLSKQEIYDGAVRHLFGQGGAAILPRGGAAYHGQGGRCCPIGNLIGVRDYTTSME CCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEECCCCCCCCCCCCCCCCCHHHCCHH SVPVRYILKPANEIPRYMDAGVTALRRALKKARIDVDDRDTVELLSKLQNAHDVFGTWEW HCCHHHEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHH KERLHSIARQFGLSGAVVDAF HHHHHHHHHHHCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA