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The map label for this gene is 17547780

Identifier: 17547780

GI number: 17547780

Start: 3299209

End: 3300375

Strand: Reverse

Name: 17547780

Synonym: RSc3061

Alternate gene names: NA

Gene position: 3300375-3299209 (Counterclockwise)

Preceding gene: 17547782

Following gene: 17547776

Centisome position: 88.81

GC content: 70.69

Gene sequence:

>1167_bases
ATGCAAATGGGAAATCACACGCGCAGTCGGCGGGGTACTCGGCTGCGCCGGCTGGCGGCCGTCGCGTTTGCGCTTTGCGC
CGGGCTGGCGGCATCGGTCGCCCAGGCCGACATCAGCGTCATCCAGTCATTGCCGCTGTCCGGCTCGCAGGCCGTCACCG
GGCACGCGCTGAATGCCGGCGCCCGGCTGTACTTCGACTGGCTCAACCTGAACGGCGGCATCCACGGCGAGACCGTCCGC
CTGGTCGCCCGCGACGACGAGCAGAAGGTCGAGCAGACCGTGCGCAACGTGCGCGACATGGCCAAGGTCGACAACCCGGT
CGCGCTGCTCACCGTGGTCGGCACCGCCAACGTCGAGGCGCTGATGCGCGAGGGCGTGCTGGCCGAGGCCCGGCTGCCGC
TGGTCGGGCCGGCCACCGGCGCGTCCAGCATGACCGGCGACCCGCTGGTGTTCCCCATCAAGGCGAGCTACCGGCAGGAG
ATCGACAAGATGATCACCGCGCTGGTGACGATCGGCATCACGCGCATCGGCGTGCTGTACCAGGACGATGCGCTGGGCAA
GGAGGCCATCGCCGGCGTCGAGCGCACGCTCAAAGCGCACGGGCTGCCGATTGCCGCCATGGCCTCGTATCCGCGCAACA
CCGCGAGCGTGGGCCCGGCAGTGGACAAGCTGCTGGCCGCCGACGTGCAGGCGATTTTCCTGGGCGCCACCGCCGCGCCG
GCGGGCCAGTTCGTCCGGCAGTACCGGGAGCGGGGTGGTGGGGCGCAGTTGCTCGGGCTGTCGTCCATCGATCCGGGCAT
CCTGCAGAAGATCGCCGGGCTCGATGCGGTGCGCGGTTATTCGCTGGCGCTGGTGATGCCGAACCCGGGCAAGAGCGTGC
ACCCGGTGATCCGCGAGTTCAACCGGGCCCGCGCGGCGGTGGGCGCGACGGACGTCGAGCTGTCGTTCCGGGCGGTGGAG
GGATTCGTGGCGGCCAAGGTGCTGGCCGAGGCGATCCGCCGCGCGGGCCCGAAGCCGACCCGCGAGCAGGTGCAGCATGC
GCTGGCGGGGCTGCACGACTACGACGTCGGCGGCGGGTTCACGGTGGATTTCACCGATCGCAGCCGCCCCGGTTCGCACT
ATGTCGAGCTGGGCGTGGTGGGGCCGAACGGCCTGGTGATCCAGTAG

Upstream 100 bases:

>100_bases
CCGCGTTGGCGTAGCAGAACGACAAAGCGGACCACCCGCCCGGGCGGTCTCGATGAGACACCGTGCAGGCCCCATGGCCA
CGCCGGAGAAGGGTGTTCAA

Downstream 100 bases:

>100_bases
GCGCTGCGCGGGCGCCGGAGGCGGCGCCCGTGAGGTCAGGCGATCCGCCGGCAGCGGTCTGCCGGCGGGCACCCGGCGGC
GGTGCGCCGGGTGGCTGGGG

Product: substrate-binding periplasmic (PBP) ABC transporter protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MQMGNHTRSRRGTRLRRLAAVAFALCAGLAASVAQADISVIQSLPLSGSQAVTGHALNAGARLYFDWLNLNGGIHGETVR
LVARDDEQKVEQTVRNVRDMAKVDNPVALLTVVGTANVEALMREGVLAEARLPLVGPATGASSMTGDPLVFPIKASYRQE
IDKMITALVTIGITRIGVLYQDDALGKEAIAGVERTLKAHGLPIAAMASYPRNTASVGPAVDKLLAADVQAIFLGATAAP
AGQFVRQYRERGGGAQLLGLSSIDPGILQKIAGLDAVRGYSLALVMPNPGKSVHPVIREFNRARAAVGATDVELSFRAVE
GFVAAKVLAEAIRRAGPKPTREQVQHALAGLHDYDVGGGFTVDFTDRSRPGSHYVELGVVGPNGLVIQ

Sequences:

>Translated_388_residues
MQMGNHTRSRRGTRLRRLAAVAFALCAGLAASVAQADISVIQSLPLSGSQAVTGHALNAGARLYFDWLNLNGGIHGETVR
LVARDDEQKVEQTVRNVRDMAKVDNPVALLTVVGTANVEALMREGVLAEARLPLVGPATGASSMTGDPLVFPIKASYRQE
IDKMITALVTIGITRIGVLYQDDALGKEAIAGVERTLKAHGLPIAAMASYPRNTASVGPAVDKLLAADVQAIFLGATAAP
AGQFVRQYRERGGGAQLLGLSSIDPGILQKIAGLDAVRGYSLALVMPNPGKSVHPVIREFNRARAAVGATDVELSFRAVE
GFVAAKVLAEAIRRAGPKPTREQVQHALAGLHDYDVGGGFTVDFTDRSRPGSHYVELGVVGPNGLVIQ
>Mature_388_residues
MQMGNHTRSRRGTRLRRLAAVAFALCAGLAASVAQADISVIQSLPLSGSQAVTGHALNAGARLYFDWLNLNGGIHGETVR
LVARDDEQKVEQTVRNVRDMAKVDNPVALLTVVGTANVEALMREGVLAEARLPLVGPATGASSMTGDPLVFPIKASYRQE
IDKMITALVTIGITRIGVLYQDDALGKEAIAGVERTLKAHGLPIAAMASYPRNTASVGPAVDKLLAADVQAIFLGATAAP
AGQFVRQYRERGGGAQLLGLSSIDPGILQKIAGLDAVRGYSLALVMPNPGKSVHPVIREFNRARAAVGATDVELSFRAVE
GFVAAKVLAEAIRRAGPKPTREQVQHALAGLHDYDVGGGFTVDFTDRSRPGSHYVELGVVGPNGLVIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40857; Mature: 40857

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQMGNHTRSRRGTRLRRLAAVAFALCAGLAASVAQADISVIQSLPLSGSQAVTGHALNAG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCC
ARLYFDWLNLNGGIHGETVRLVARDDEQKVEQTVRNVRDMAKVDNPVALLTVVGTANVEA
CEEEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHH
LMREGVLAEARLPLVGPATGASSMTGDPLVFPIKASYRQEIDKMITALVTIGITRIGVLY
HHHCCCHHHCCCCEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHEEEE
QDDALGKEAIAGVERTLKAHGLPIAAMASYPRNTASVGPAVDKLLAADVQAIFLGATAAP
ECCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCC
AGQFVRQYRERGGGAQLLGLSSIDPGILQKIAGLDAVRGYSLALVMPNPGKSVHPVIREF
HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCHHHCCCEEEEEECCCCCCHHHHHHHH
NRARAAVGATDVELSFRAVEGFVAAKVLAEAIRRAGPKPTREQVQHALAGLHDYDVGGGF
HHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCE
TVDFTDRSRPGSHYVELGVVGPNGLVIQ
EEEECCCCCCCCCEEEEEEECCCCCEEC
>Mature Secondary Structure
MQMGNHTRSRRGTRLRRLAAVAFALCAGLAASVAQADISVIQSLPLSGSQAVTGHALNAG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCC
ARLYFDWLNLNGGIHGETVRLVARDDEQKVEQTVRNVRDMAKVDNPVALLTVVGTANVEA
CEEEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHH
LMREGVLAEARLPLVGPATGASSMTGDPLVFPIKASYRQEIDKMITALVTIGITRIGVLY
HHHCCCHHHCCCCEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHEEEE
QDDALGKEAIAGVERTLKAHGLPIAAMASYPRNTASVGPAVDKLLAADVQAIFLGATAAP
ECCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCC
AGQFVRQYRERGGGAQLLGLSSIDPGILQKIAGLDAVRGYSLALVMPNPGKSVHPVIREF
HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCHHHCCCEEEEEECCCCCCHHHHHHHH
NRARAAVGATDVELSFRAVEGFVAAKVLAEAIRRAGPKPTREQVQHALAGLHDYDVGGGF
HHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCE
TVDFTDRSRPGSHYVELGVVGPNGLVIQ
EEEECCCCCCCCCEEEEEEECCCCCEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA