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The map label for this gene is nusG [H]

Identifier: 17547758

GI number: 17547758

Start: 3270657

End: 3271241

Strand: Reverse

Name: nusG [H]

Synonym: RSc3039

Alternate gene names: 17547758

Gene position: 3271241-3270657 (Counterclockwise)

Preceding gene: 17547759

Following gene: 17547757

Centisome position: 88.02

GC content: 60.0

Gene sequence:

>585_bases
ATGACGGACAACGCAGCGAACGATACGGCCTCGGCTTCGTCCGCGCCGGCCTCGAAGAAGCGCTGGTATGTCGTGCATGC
CTACTCGGGCATGGAAAAGAGCGTGCAACGCTCGCTACAGGAGCGCATCGATCGCGCCGGCCTGCAGCACATGTTCGGCC
GCATCCTGGTGCCGTCCGAAGAAGTCGTGGAGATGAAGGGCGGCCACAAGGCCGTCACGGAACGCCGCTTCTTTCCGGGT
TACGTGCTGGTCGAGATGGAGATGACCGATGAAACTTGGCACTTGGTGAAGAACACTTCCAAGGTGACGGGTTTCGTGGG
CGGGACGGGTAACCGTCCGACGCCGATTTCCCAACGGGAAGTCGACAAGATCATGACCCAGATCCAGGAAGGGGTCGAGA
AGCCGCGTCCCAAGACGCTGTTCGAAGTGGGTGAAATGGTGCGCGTGAAGGAAGGCCCATTCACTGATTTCAACGGCAAC
GTCGAAGAAGTGAACTACGAGAAGTCGCGCTTGCGCGTTTCCGTGACGATCTTCGGGCGTGCGACGCCGGTCGAGCTCGA
GTTCGGCCAGGTCGAGAAGGTGTAA

Upstream 100 bases:

>100_bases
TTTCGTGGTGATCATGGCCGTGTTCCTGTGGTCTGCGGACAAGCTCATCGAGTGGGTCATTTTCTCGCTCGTGTTGGGCT
GGAAATAATCGGGTGAAGCA

Downstream 100 bases:

>100_bases
GGAATTCGTGCGACGGTGTGAGCCGTCGCACTGATCTCCGGGCCGATAGCGGCCGGGTGGGCAACGGTGGCGAAGCCACT
CGCGCCAACAGAGGAGCGTC

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MTDNAANDTASASSAPASKKRWYVVHAYSGMEKSVQRSLQERIDRAGLQHMFGRILVPSEEVVEMKGGHKAVTERRFFPG
YVLVEMEMTDETWHLVKNTSKVTGFVGGTGNRPTPISQREVDKIMTQIQEGVEKPRPKTLFEVGEMVRVKEGPFTDFNGN
VEEVNYEKSRLRVSVTIFGRATPVELEFGQVEKV

Sequences:

>Translated_194_residues
MTDNAANDTASASSAPASKKRWYVVHAYSGMEKSVQRSLQERIDRAGLQHMFGRILVPSEEVVEMKGGHKAVTERRFFPG
YVLVEMEMTDETWHLVKNTSKVTGFVGGTGNRPTPISQREVDKIMTQIQEGVEKPRPKTLFEVGEMVRVKEGPFTDFNGN
VEEVNYEKSRLRVSVTIFGRATPVELEFGQVEKV
>Mature_193_residues
TDNAANDTASASSAPASKKRWYVVHAYSGMEKSVQRSLQERIDRAGLQHMFGRILVPSEEVVEMKGGHKAVTERRFFPGY
VLVEMEMTDETWHLVKNTSKVTGFVGGTGNRPTPISQREVDKIMTQIQEGVEKPRPKTLFEVGEMVRVKEGPFTDFNGNV
EEVNYEKSRLRVSVTIFGRATPVELEFGQVEKV

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=177, Percent_Identity=63.2768361581921, Blast_Score=242, Evalue=1e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 21838; Mature: 21707

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDNAANDTASASSAPASKKRWYVVHAYSGMEKSVQRSLQERIDRAGLQHMFGRILVPSE
CCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCEECCCCH
EVVEMKGGHKAVTERRFFPGYVLVEMEMTDETWHLVKNTSKVTGFVGGTGNRPTPISQRE
HHHHHCCCCHHHHHCCCCCCEEEEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCHHH
VDKIMTQIQEGVEKPRPKTLFEVGEMVRVKEGPFTDFNGNVEEVNYEKSRLRVSVTIFGR
HHHHHHHHHHHHCCCCCHHHHHHHHHEEECCCCCCCCCCCHHHCCCCCCEEEEEEEEECC
ATPVELEFGQVEKV
CCCEEEECCCCCCC
>Mature Secondary Structure 
TDNAANDTASASSAPASKKRWYVVHAYSGMEKSVQRSLQERIDRAGLQHMFGRILVPSE
CCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCEECCCCH
EVVEMKGGHKAVTERRFFPGYVLVEMEMTDETWHLVKNTSKVTGFVGGTGNRPTPISQRE
HHHHHCCCCHHHHHCCCCCCEEEEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCHHH
VDKIMTQIQEGVEKPRPKTLFEVGEMVRVKEGPFTDFNGNVEEVNYEKSRLRVSVTIFGR
HHHHHHHHHHHHCCCCCHHHHHHHHHEEECCCCCCCCCCCHHHCCCCCCEEEEEEEEECC
ATPVELEFGQVEKV
CCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]