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The map label for this gene is yfaQ [H]

Identifier: 17547748

GI number: 17547748

Start: 3249836

End: 3251566

Strand: Reverse

Name: yfaQ [H]

Synonym: RSc3029

Alternate gene names: 17547748

Gene position: 3251566-3249836 (Counterclockwise)

Preceding gene: 17547749

Following gene: 17547747

Centisome position: 87.49

GC content: 75.22

Gene sequence:

>1731_bases
ATGCGCTCCGGCTGGCTTGCGCGCGCGGTGCTGACCGGCCTGGTTTGGGCCGGCAGCGCGCTGGCGTGCGCGCCGGCCGT
CGCCGCGGTGCCGCCGGCCGAGCCGCTGCGCTACGCCACCCTGCCGGGCGGACAGGGCGCACAGGGTGATGCGGCCCGGC
TGTGGCAGTTCAGCGCCGACCCCGCCGCCGGCGTGCCGCAACCGGTGCCGCTGGCGCACGATGTCGAGACGCCGCTGGGC
AGCGTCTGGAAGCTGTTCGTCTACAGCTACCTGGTCTCGCGCCGGATCGCGACGCCCGACTACCCCTGCCATGGCAACGA
TCCCGAAGAGGTCTATTGCTGCACGGCCGGGCAGAGCATCGACCGCGAGCACGCGCTGATCCAGTCGTGCGGCCGCTATT
TCGAACCCGCGCGCCTGGGGCTGGACCCGGCCGACTGGCGCCGCTTCTGGCAGCAGGCGGGCTCGCCCGCGTGGCTGCGC
GATGCGCGCGCGCTGCGGCCGGCCCGCCGCGTTGCCGTCGCCGACCTGCTGGCCGCGCTGCGTAGCGTGCCCACCGATGG
CCGCGAGGCCGCCGCGCACACGCTGGTGTCGGTGCTGACGGTGGGGCGCGGCGAAGGGACCGTCTCGCATTTCGGCAGCC
TGCTGCGCGCCAAGACCTGGACCATGCCCGATCCGCAGCGCCCCGGTGCGTCGATCGGCGGGGCCGCCGGCTGGCTGGCC
GACGGCACGGTGGTCTGGCTCGGCGGTTCCGGCGCGAGCAACCGCGTGCTGGCCGCCGCCGCGCCGCGCCTGATGCCGCT
GCTCGAGCACACGCCCGTGCCCGACGACGATGCCTGCGTGGCGGTCGACTTCTTTGCGCGCTACCCGATCCGCGAGGTGC
GCGATGCCGACGGCAAACCGGTCGGCACGGGCCGGCTGGACGGCCGCTACGCCGTGCGCTTCGTCAACGGCAATACGCTG
GCGATCGACAGCCGGGGCGAGTTGGCGCTGTCGCGCGAAAGCGGTGCCCCGGTCATCACCGGACGCCTCGGCATGAACGA
CTACGTGGCCCGCGTGGTGGAGCGCGAGGGCGAGTTGGCCGAGCCGCAGGCCGCCCGCGCGCTGGCCGTGGCGGCCCGCA
GCTACCTGGTGCAGCACGCCTCGCGCGACCAGGGCTGCTACCGCATCGCCGACACCTCCCGCGCGCAGCGCGTGCTGCCG
CGCCCGCCGTCCGCCGCCGCCCGCAGCGCCGCCGCCTTCACGGACGCGCTGGTCCTGACCGGTCAGCCGGTGCAATACCA
CGGCACCCTCAGCGCACGCGGCCGGATGGGCTGGACCGACGCGCGCGCCGCCGCCCAGCGGGGCCTGGGCTTCGACGCCA
TTCTCGCCCAGTGGTGGCCGCAGGCGACGCTGACCTCGTTCCGGAGCCCGGTCGCGGGCGACTGCCTGTCGGTGGCGGGG
GCGCAGCCGTGGCTGCGGGCGCAGGCGCCGCGCTGGTCGGCCCGGCTGGCCGCCGAGCCCGGCTACGAGACGCCGCCGCT
GCCCGCCGTCTGCGTGGTCCGCGAAGGGCGGCCCTATGCCGATGCGCGCCGCAACCGGCTCTACATCCAGCGCTTTGCCG
GCGAGGAGGATCGCATCGCGCTGGCGCACGAATATCTGCACCTGGCGTTCGCGCGGCATCCGCGCGGGCAGGACGAAGGC
TTTGTCGAGGCGACCGCGCGCCGCCTGATCCGTGGGGAGGGTTTGCTGTGA

Upstream 100 bases:

>100_bases
CCGCCGGCGCGCTACTTCCGCATGTACCAGCCGGAAGCCAAGGCGCTGCAGGGCGACGGCAAGGCCGCCAGCTATCCGTT
CAAGGTGGAGTGACGCGGCG

Downstream 100 bases:

>100_bases
AGACGTGGATGACACGGATGGGCACCGGCGCGGCGGCCGGGCTGCTGGCGCTGTCGGCATGGGCCGAGCCCGTGGCCGAC
CTGGACGGCCCCATCGGCGG

Product: signal peptide protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 576; Mature: 576

Protein sequence:

>576_residues
MRSGWLARAVLTGLVWAGSALACAPAVAAVPPAEPLRYATLPGGQGAQGDAARLWQFSADPAAGVPQPVPLAHDVETPLG
SVWKLFVYSYLVSRRIATPDYPCHGNDPEEVYCCTAGQSIDREHALIQSCGRYFEPARLGLDPADWRRFWQQAGSPAWLR
DARALRPARRVAVADLLAALRSVPTDGREAAAHTLVSVLTVGRGEGTVSHFGSLLRAKTWTMPDPQRPGASIGGAAGWLA
DGTVVWLGGSGASNRVLAAAAPRLMPLLEHTPVPDDDACVAVDFFARYPIREVRDADGKPVGTGRLDGRYAVRFVNGNTL
AIDSRGELALSRESGAPVITGRLGMNDYVARVVEREGELAEPQAARALAVAARSYLVQHASRDQGCYRIADTSRAQRVLP
RPPSAAARSAAAFTDALVLTGQPVQYHGTLSARGRMGWTDARAAAQRGLGFDAILAQWWPQATLTSFRSPVAGDCLSVAG
AQPWLRAQAPRWSARLAAEPGYETPPLPAVCVVREGRPYADARRNRLYIQRFAGEEDRIALAHEYLHLAFARHPRGQDEG
FVEATARRLIRGEGLL

Sequences:

>Translated_576_residues
MRSGWLARAVLTGLVWAGSALACAPAVAAVPPAEPLRYATLPGGQGAQGDAARLWQFSADPAAGVPQPVPLAHDVETPLG
SVWKLFVYSYLVSRRIATPDYPCHGNDPEEVYCCTAGQSIDREHALIQSCGRYFEPARLGLDPADWRRFWQQAGSPAWLR
DARALRPARRVAVADLLAALRSVPTDGREAAAHTLVSVLTVGRGEGTVSHFGSLLRAKTWTMPDPQRPGASIGGAAGWLA
DGTVVWLGGSGASNRVLAAAAPRLMPLLEHTPVPDDDACVAVDFFARYPIREVRDADGKPVGTGRLDGRYAVRFVNGNTL
AIDSRGELALSRESGAPVITGRLGMNDYVARVVEREGELAEPQAARALAVAARSYLVQHASRDQGCYRIADTSRAQRVLP
RPPSAAARSAAAFTDALVLTGQPVQYHGTLSARGRMGWTDARAAAQRGLGFDAILAQWWPQATLTSFRSPVAGDCLSVAG
AQPWLRAQAPRWSARLAAEPGYETPPLPAVCVVREGRPYADARRNRLYIQRFAGEEDRIALAHEYLHLAFARHPRGQDEG
FVEATARRLIRGEGLL
>Mature_576_residues
MRSGWLARAVLTGLVWAGSALACAPAVAAVPPAEPLRYATLPGGQGAQGDAARLWQFSADPAAGVPQPVPLAHDVETPLG
SVWKLFVYSYLVSRRIATPDYPCHGNDPEEVYCCTAGQSIDREHALIQSCGRYFEPARLGLDPADWRRFWQQAGSPAWLR
DARALRPARRVAVADLLAALRSVPTDGREAAAHTLVSVLTVGRGEGTVSHFGSLLRAKTWTMPDPQRPGASIGGAAGWLA
DGTVVWLGGSGASNRVLAAAAPRLMPLLEHTPVPDDDACVAVDFFARYPIREVRDADGKPVGTGRLDGRYAVRFVNGNTL
AIDSRGELALSRESGAPVITGRLGMNDYVARVVEREGELAEPQAARALAVAARSYLVQHASRDQGCYRIADTSRAQRVLP
RPPSAAARSAAAFTDALVLTGQPVQYHGTLSARGRMGWTDARAAAQRGLGFDAILAQWWPQATLTSFRSPVAGDCLSVAG
AQPWLRAQAPRWSARLAAEPGYETPPLPAVCVVREGRPYADARRNRLYIQRFAGEEDRIALAHEYLHLAFARHPRGQDEG
FVEATARRLIRGEGLL

Specific function: Unknown

COG id: COG5445

COG function: function code S; Predicted secreted protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788557, Length=561, Percent_Identity=39.3939393939394, Blast_Score=384, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018748
- InterPro:   IPR013693 [H]

Pfam domain/function: PF10062 DUF2300; PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 61935; Mature: 61935

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00104 EPSP_SYNTHASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSGWLARAVLTGLVWAGSALACAPAVAAVPPAEPLRYATLPGGQGAQGDAARLWQFSAD
CCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHEEECCC
PAAGVPQPVPLAHDVETPLGSVWKLFVYSYLVSRRIATPDYPCHGNDPEEVYCCTAGQSI
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCC
DREHALIQSCGRYFEPARLGLDPADWRRFWQQAGSPAWLRDARALRPARRVAVADLLAAL
CHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RSVPTDGREAAAHTLVSVLTVGRGEGTVSHFGSLLRAKTWTMPDPQRPGASIGGAAGWLA
HHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
DGTVVWLGGSGASNRVLAAAAPRLMPLLEHTPVPDDDACVAVDFFARYPIREVRDADGKP
CCEEEEEECCCCCCCEEEHHCHHHHHHHHCCCCCCCCCEEEEHHHHHCCHHHHHCCCCCC
VGTGRLDGRYAVRFVNGNTLAIDSRGELALSRESGAPVITGRLGMNDYVARVVEREGELA
CCCCCCCCEEEEEEECCCEEEEECCCCEEEECCCCCCEEEECCCCHHHHHHHHHHCCCCC
EPQAARALAVAARSYLVQHASRDQGCYRIADTSRAQRVLPRPPSAAARSAAAFTDALVLT
CCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHCCCCCCCHHHHHHHHHHHEEEEC
GQPVQYHGTLSARGRMGWTDARAAAQRGLGFDAILAQWWPQATLTSFRSPVAGDCLSVAG
CCCEEEECEEECCCCCCCHHHHHHHHHCCCHHHHHHHHCCHHHHHHHCCCCCCHHHHHCC
AQPWLRAQAPRWSARLAAEPGYETPPLPAVCVVREGRPYADARRNRLYIQRFAGEEDRIA
CCCHHHCCCCCCCCEECCCCCCCCCCCCEEEEEECCCCHHHHHHCEEEEHHHCCCCCCCH
LAHEYLHLAFARHPRGQDEGFVEATARRLIRGEGLL
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRSGWLARAVLTGLVWAGSALACAPAVAAVPPAEPLRYATLPGGQGAQGDAARLWQFSAD
CCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHEEECCC
PAAGVPQPVPLAHDVETPLGSVWKLFVYSYLVSRRIATPDYPCHGNDPEEVYCCTAGQSI
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCC
DREHALIQSCGRYFEPARLGLDPADWRRFWQQAGSPAWLRDARALRPARRVAVADLLAAL
CHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RSVPTDGREAAAHTLVSVLTVGRGEGTVSHFGSLLRAKTWTMPDPQRPGASIGGAAGWLA
HHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
DGTVVWLGGSGASNRVLAAAAPRLMPLLEHTPVPDDDACVAVDFFARYPIREVRDADGKP
CCEEEEEECCCCCCCEEEHHCHHHHHHHHCCCCCCCCCEEEEHHHHHCCHHHHHCCCCCC
VGTGRLDGRYAVRFVNGNTLAIDSRGELALSRESGAPVITGRLGMNDYVARVVEREGELA
CCCCCCCCEEEEEEECCCEEEEECCCCEEEECCCCCCEEEECCCCHHHHHHHHHHCCCCC
EPQAARALAVAARSYLVQHASRDQGCYRIADTSRAQRVLPRPPSAAARSAAAFTDALVLT
CCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHCCCCCCCHHHHHHHHHHHEEEEC
GQPVQYHGTLSARGRMGWTDARAAAQRGLGFDAILAQWWPQATLTSFRSPVAGDCLSVAG
CCCEEEECEEECCCCCCCHHHHHHHHHCCCHHHHHHHHCCHHHHHHHCCCCCCHHHHHCC
AQPWLRAQAPRWSARLAAEPGYETPPLPAVCVVREGRPYADARRNRLYIQRFAGEEDRIA
CCCHHHCCCCCCCCEECCCCCCCCCCCCEEEEEECCCCHHHHHHCEEEEHHHCCCCCCCH
LAHEYLHLAFARHPRGQDEGFVEATARRLIRGEGLL
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]