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The map label for this gene is yadH [H]

Identifier: 17547674

GI number: 17547674

Start: 3184160

End: 3184948

Strand: Reverse

Name: yadH [H]

Synonym: RSc2955

Alternate gene names: 17547674

Gene position: 3184948-3184160 (Counterclockwise)

Preceding gene: 17547675

Following gene: 17547673

Centisome position: 85.7

GC content: 65.15

Gene sequence:

>789_bases
ATGAGCGCCATTCCGCAGATCCGCCCGGGCCGCTGGACCGGCTTTCGCACGCTGCTGTACAAGGAAGTGCTGCGCTTCTG
GAAGGTCAGCTTCCAGACCGTGGCCGCGCCGGTGTTGACCGCGCTGCTGTACCTGCTGATCTTCGGCCACGTGCTGGAAG
ACCACGTGCAGGTGTTCGGCCAGATCGGCTACACCGCGTTCCTGATCCCGGGCCTGGTGATGATGAGCGTGCTGCAGAAC
GCGTTCGCCAACAGCTCGTCGTCGCTGATCCAGTCGAAGATCACGGGCAACCTGGTGTTCATCATGCTGCCGCCGCTGTC
GCACTGGGAGATGTTCGGCGCGTACGTGGTTGCCTCGGTGATCCGCGGGCTGGCGGTGGGCGCGGGCGTGCTCGTCGTGA
CGGCGTGGTTTGCCCACCTGCACTTCGCGCAGCCGCTGTGGATCATCGTCTTCGCCATCCTGGGCGCGGCCGTGCTCGGG
ACGCTGGGGCTGATCGCCGGCATCTGGGCCGAGAAGTTCGACCAGCTCGCGGCGTTCCAAAATTTCCTGATCGTGCCGGC
CACTTTCCTGGCGGGCGTGTTCTATTCGATCCATTCGCTGCCCGCCTTCTGGCAGGTGGTGTCCCACGCCAACCCGTTCT
TCTACATGATCGACGGCTTCCGCTACGGCTTCTTCGGGGTGTCCGACGTGCCGGTGGCGACCAGCCTCGGCGTGATGGTG
GTCGCGCTGGTCGTGGTGGGGGGGATCGCCCTGCAGATGCTTCGCACGGGCTACAAGCTGCGCCATTGA

Upstream 100 bases:

>100_bases
ACCTGGAAGACGTGTTCGTGCAGATCATGCGGCGCGAGGGCGGCATGCCCGCCGCGCCGGGCGTGCCGGCGATTCCCGAT
TCCGCGCTGGAGCCTGCCGC

Downstream 100 bases:

>100_bases
TGCGTCGATAACAAACCAAGACGCACCACCCTAACGTTTCTGGAGAAGGGAAGGCCATGTTGCCCACACCCGAACAAATC
AAGCAGTACATCGAAGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MSAIPQIRPGRWTGFRTLLYKEVLRFWKVSFQTVAAPVLTALLYLLIFGHVLEDHVQVFGQIGYTAFLIPGLVMMSVLQN
AFANSSSSLIQSKITGNLVFIMLPPLSHWEMFGAYVVASVIRGLAVGAGVLVVTAWFAHLHFAQPLWIIVFAILGAAVLG
TLGLIAGIWAEKFDQLAAFQNFLIVPATFLAGVFYSIHSLPAFWQVVSHANPFFYMIDGFRYGFFGVSDVPVATSLGVMV
VALVVVGGIALQMLRTGYKLRH

Sequences:

>Translated_262_residues
MSAIPQIRPGRWTGFRTLLYKEVLRFWKVSFQTVAAPVLTALLYLLIFGHVLEDHVQVFGQIGYTAFLIPGLVMMSVLQN
AFANSSSSLIQSKITGNLVFIMLPPLSHWEMFGAYVVASVIRGLAVGAGVLVVTAWFAHLHFAQPLWIIVFAILGAAVLG
TLGLIAGIWAEKFDQLAAFQNFLIVPATFLAGVFYSIHSLPAFWQVVSHANPFFYMIDGFRYGFFGVSDVPVATSLGVMV
VALVVVGGIALQMLRTGYKLRH
>Mature_261_residues
SAIPQIRPGRWTGFRTLLYKEVLRFWKVSFQTVAAPVLTALLYLLIFGHVLEDHVQVFGQIGYTAFLIPGLVMMSVLQNA
FANSSSSLIQSKITGNLVFIMLPPLSHWEMFGAYVVASVIRGLAVGAGVLVVTAWFAHLHFAQPLWIIVFAILGAAVLGT
LGLIAGIWAEKFDQLAAFQNFLIVPATFLAGVFYSIHSLPAFWQVVSHANPFFYMIDGFRYGFFGVSDVPVATSLGVMVV
ALVVVGGIALQMLRTGYKLRH

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=250, Percent_Identity=36.8, Blast_Score=174, Evalue=6e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 28739; Mature: 28607

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SAIPQIRPGRWTGFRTLLYKEVLRFWKVSFQTVAAPVLTALLYLLIFGHVLEDHVQVFG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIGYTAFLIPGLVMMSVLQNAFANSSSSLIQSKITGNLVFIMLPPLSHWEMFGAYVVASV
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHH
IRGLAVGAGVLVVTAWFAHLHFAQPLWIIVFAILGAAVLGTLGLIAGIWAEKFDQLAAFQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NFLIVPATFLAGVFYSIHSLPAFWQVVSHANPFFYMIDGFRYGFFGVSDVPVATSLGVMV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHH
VALVVVGGIALQMLRTGYKLRH
HHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]