| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is mdoG
Identifier: 17547627
GI number: 17547627
Start: 3133514
End: 3135028
Strand: Direct
Name: mdoG
Synonym: RSc2908
Alternate gene names: 17547627
Gene position: 3133514-3135028 (Clockwise)
Preceding gene: 17547624
Following gene: 17547628
Centisome position: 84.32
GC content: 67.59
Gene sequence:
>1515_bases ATGCGGCTGGCTGTCGGCCTGCTGGCGCTGGCCTCGGCGCAGGCGGCGCTGGCCTTCGGCCTCAACGACGTGGCCGCGCG CGCCAAGCAGCTGGCGGCCAAGCCTTATCAGGCGCCGCCCGACACGCTGCCGCACGAACTGCGCGAGCTGCGCTACGACC AGTACCGCGAAATCCGCTTCAAGTCGGACCAGGCCTACTGGCGCCGCGACAAACTGCCGTTCGAGCTCGGCTTCTTCCAC GAGGGCTCGTACTACGACCAGCCGGTGAAGATCAACGAGGTCTCCCCGGCCGGCGCGCGCGAGATCCGCTTCGACCCCAG GCTGTTCGACTACGGCCCCGTCAAGCTCGACCCGAAGCATCTGCGCAACCTGGGCTTCGCCGGATTCCGCATCCATTACC CGATGAACACGCCCAAGTACAAGGACGAAGTCATCGTCTTCCTGGGCGCGTCCTACTTCCGCGGCATCGGCAAGGGGCAG GTCTATGGCCTGTCCGCGCGCGGCCTGGCCATCGATACCGCGCTCAACTCCGGCGAGGAATTCCCCCGCTTCACCGAATT CTGGATCGAGCGCCCGGCGGCCAACGCCAAGGAGCTGACGATCTACGCCCTGCTCAATTCGCGCCGCGCCACCGGCGCGT ACCGCTTCGTCATCAAGCCAGGCACGGACACCGAGGTCGACGTGAAGGCGCAGCTCTACATGCGCGAGAACGTCAGCAAG CTGGGCATCGCGCCGCTGACCAGCATGTTCTTCTTCGGCGAGAACCAGCCGGCCAGCGCGCTGGACTTCCGGCCCGAAGT CCATGACTCCGACGGCCTGTCGATGCTGTCGGGCACGGGCGAATGGATCTGGCGTCCGCTCACCAACCCGAAGCGCCTGC TGGTCAGCTCCTTCTCCACCACCAACCCCGGCGGCTTCGGCCTGATGCAGCGCGACCGCGCCTTCTCCAGCTACCAGGAA ATCGGCGACCGCTACGAGCTGCGCCCGAGCGCGTGGGTGGAGCCGGTCGGCAAATGGGGCGCCGGCCGCGTGGAGCTGGT GCAGATCCCGACGCCGGACGAGACCAACGACAACGTGGTCGCATACTGGGTGCCCGAGACGCCGCCCAAGCCGCAGCAGC CGTTCAACCTCGAATACCGCCTGCTGTGGCAGAAGGAGGGCGACAAGAAGCCCGGCCTGTCGTGGGTCACGCAGACGCGC CGCTCGCACGGCTGGACCACCAAGCGCCCCGACGAACGCAAGCCGGACGACACCATCGCCCTCGTGGTCGACTTCGAGGG CCCGGCCCTGGCGAAGCTGCCGCCCAACGCACCGGTCGAGCCGGTGTTCACGGCGGACGCCAACGGCAAGATCGAATCGA TCTTCGGCCAACCCAACACCGCGACCGGCGGCTGGCGCGTCACCGTGCGCCTGAAGCGGGTCGACGACGACAAACCCATC GAGCTGCGCGGCTATCTGCGCAGCGGCGGTACCGGACTTTCTGAGACGTGGAGCTACCTGCTACCTCCGGGCTGA
Upstream 100 bases:
>100_bases TCGATTTCGTTCCCCTCGCCGCCAGACACGCGATCCCATTTTGACCATTCCACACGCTGTTCCCTCCCATTCTCGCCGCG CGCGCGCGATGGCCGGCTGC
Downstream 100 bases:
>100_bases ACGCCCAGCCCGGCAACGCTGAGGGCACGACCGCCTCCACCCGGCCGGCCACGGCGCTGTCCGTGGCCGAGCGTTATCTT GAGGCGCTCCCCTTGCCTGC
Product: glucan biosynthesis protein G
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 504; Mature: 504
Protein sequence:
>504_residues MRLAVGLLALASAQAALAFGLNDVAARAKQLAAKPYQAPPDTLPHELRELRYDQYREIRFKSDQAYWRRDKLPFELGFFH EGSYYDQPVKINEVSPAGAREIRFDPRLFDYGPVKLDPKHLRNLGFAGFRIHYPMNTPKYKDEVIVFLGASYFRGIGKGQ VYGLSARGLAIDTALNSGEEFPRFTEFWIERPAANAKELTIYALLNSRRATGAYRFVIKPGTDTEVDVKAQLYMRENVSK LGIAPLTSMFFFGENQPASALDFRPEVHDSDGLSMLSGTGEWIWRPLTNPKRLLVSSFSTTNPGGFGLMQRDRAFSSYQE IGDRYELRPSAWVEPVGKWGAGRVELVQIPTPDETNDNVVAYWVPETPPKPQQPFNLEYRLLWQKEGDKKPGLSWVTQTR RSHGWTTKRPDERKPDDTIALVVDFEGPALAKLPPNAPVEPVFTADANGKIESIFGQPNTATGGWRVTVRLKRVDDDKPI ELRGYLRSGGTGLSETWSYLLPPG
Sequences:
>Translated_504_residues MRLAVGLLALASAQAALAFGLNDVAARAKQLAAKPYQAPPDTLPHELRELRYDQYREIRFKSDQAYWRRDKLPFELGFFH EGSYYDQPVKINEVSPAGAREIRFDPRLFDYGPVKLDPKHLRNLGFAGFRIHYPMNTPKYKDEVIVFLGASYFRGIGKGQ VYGLSARGLAIDTALNSGEEFPRFTEFWIERPAANAKELTIYALLNSRRATGAYRFVIKPGTDTEVDVKAQLYMRENVSK LGIAPLTSMFFFGENQPASALDFRPEVHDSDGLSMLSGTGEWIWRPLTNPKRLLVSSFSTTNPGGFGLMQRDRAFSSYQE IGDRYELRPSAWVEPVGKWGAGRVELVQIPTPDETNDNVVAYWVPETPPKPQQPFNLEYRLLWQKEGDKKPGLSWVTQTR RSHGWTTKRPDERKPDDTIALVVDFEGPALAKLPPNAPVEPVFTADANGKIESIFGQPNTATGGWRVTVRLKRVDDDKPI ELRGYLRSGGTGLSETWSYLLPPG >Mature_504_residues MRLAVGLLALASAQAALAFGLNDVAARAKQLAAKPYQAPPDTLPHELRELRYDQYREIRFKSDQAYWRRDKLPFELGFFH EGSYYDQPVKINEVSPAGAREIRFDPRLFDYGPVKLDPKHLRNLGFAGFRIHYPMNTPKYKDEVIVFLGASYFRGIGKGQ VYGLSARGLAIDTALNSGEEFPRFTEFWIERPAANAKELTIYALLNSRRATGAYRFVIKPGTDTEVDVKAQLYMRENVSK LGIAPLTSMFFFGENQPASALDFRPEVHDSDGLSMLSGTGEWIWRPLTNPKRLLVSSFSTTNPGGFGLMQRDRAFSSYQE IGDRYELRPSAWVEPVGKWGAGRVELVQIPTPDETNDNVVAYWVPETPPKPQQPFNLEYRLLWQKEGDKKPGLSWVTQTR RSHGWTTKRPDERKPDDTIALVVDFEGPALAKLPPNAPVEPVFTADANGKIESIFGQPNTATGGWRVTVRLKRVDDDKPI ELRGYLRSGGTGLSETWSYLLPPG
Specific function: Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
COG id: COG3131
COG function: function code P; Periplasmic glucans biosynthesis protein
Gene ontology:
Cell location: Periplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the opgD/opgG family
Homologues:
Organism=Escherichia coli, GI1787286, Length=502, Percent_Identity=52.9880478087649, Blast_Score=551, Evalue=1e-158, Organism=Escherichia coli, GI145693128, Length=536, Percent_Identity=38.8059701492537, Blast_Score=331, Evalue=8e-92,
Paralogues:
None
Copy number: 280 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): OPGG_RALSO (Q8XVC3)
Other databases:
- EMBL: AL646052 - RefSeq: NP_521029.1 - ProteinModelPortal: Q8XVC3 - SMR: Q8XVC3 - GeneID: 1221761 - GenomeReviews: AL646052_GR - KEGG: rso:RSc2908 - NMPDR: fig|267608.1.peg.2908 - HOGENOM: HBG349977 - OMA: LHYPIND - ProtClustDB: PRK13274 - BioCyc: RSOL267608:RSC2908-MONOMER - HAMAP: MF_01069 - InterPro: IPR014438 - InterPro: IPR007444 - InterPro: IPR011013 - InterPro: IPR014756 - PIRSF: PIRSF006281
Pfam domain/function: PF04349 MdoG; SSF74650 Gal_mut_like; SSF81296 Ig_E-set
EC number: NA
Molecular weight: Translated: 56762; Mature: 56762
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLAVGLLALASAQAALAFGLNDVAARAKQLAAKPYQAPPDTLPHELRELRYDQYREIRF CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCHHHHHHEEE KSDQAYWRRDKLPFELGFFHEGSYYDQPVKINEVSPAGAREIRFDPRLFDYGPVKLDPKH CCCCHHHHHCCCCEEEEEEECCCCCCCCEEEECCCCCCCCEEEECCCEECCCCCEECHHH LRNLGFAGFRIHYPMNTPKYKDEVIVFLGASYFRGIGKGQVYGLSARGLAIDTALNSGEE HHHCCCCEEEEEECCCCCCCCCCEEEEEECHHHCCCCCCEEEEEECCCEEEEEECCCCCC FPRFTEFWIERPAANAKELTIYALLNSRRATGAYRFVIKPGTDTEVDVKAQLYMRENVSK CCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCEEEEEEEEEHHCHHH LGIAPLTSMFFFGENQPASALDFRPEVHDSDGLSMLSGTGEWIWRPLTNPKRLLVSSFST CCCHHHHHEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCHHEEEECCCC TNPGGFGLMQRDRAFSSYQEIGDRYELRPSAWVEPVGKWGAGRVELVQIPTPDETNDNVV CCCCCCCCHHHHHHHHHHHHHCCCEECCCCHHHCCCCCCCCCCEEEEECCCCCCCCCCEE AYWVPETPPKPQQPFNLEYRLLWQKEGDKKPGLSWVTQTRRSHGWTTKRPDERKPDDTIA EEECCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEE LVVDFEGPALAKLPPNAPVEPVFTADANGKIESIFGQPNTATGGWRVTVRLKRVDDDKPI EEEECCCCEEECCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCEEEEEEEEECCCCCCE ELRGYLRSGGTGLSETWSYLLPPG EEEEEEECCCCCHHHHHCCCCCCC >Mature Secondary Structure MRLAVGLLALASAQAALAFGLNDVAARAKQLAAKPYQAPPDTLPHELRELRYDQYREIRF CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCHHHHHHEEE KSDQAYWRRDKLPFELGFFHEGSYYDQPVKINEVSPAGAREIRFDPRLFDYGPVKLDPKH CCCCHHHHHCCCCEEEEEEECCCCCCCCEEEECCCCCCCCEEEECCCEECCCCCEECHHH LRNLGFAGFRIHYPMNTPKYKDEVIVFLGASYFRGIGKGQVYGLSARGLAIDTALNSGEE HHHCCCCEEEEEECCCCCCCCCCEEEEEECHHHCCCCCCEEEEEECCCEEEEEECCCCCC FPRFTEFWIERPAANAKELTIYALLNSRRATGAYRFVIKPGTDTEVDVKAQLYMRENVSK CCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCEEEEEEEEEHHCHHH LGIAPLTSMFFFGENQPASALDFRPEVHDSDGLSMLSGTGEWIWRPLTNPKRLLVSSFST CCCHHHHHEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCHHEEEECCCC TNPGGFGLMQRDRAFSSYQEIGDRYELRPSAWVEPVGKWGAGRVELVQIPTPDETNDNVV CCCCCCCCHHHHHHHHHHHHHCCCEECCCCHHHCCCCCCCCCCEEEEECCCCCCCCCCEE AYWVPETPPKPQQPFNLEYRLLWQKEGDKKPGLSWVTQTRRSHGWTTKRPDERKPDDTIA EEECCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEE LVVDFEGPALAKLPPNAPVEPVFTADANGKIESIFGQPNTATGGWRVTVRLKRVDDDKPI EEEECCCCEEECCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCEEEEEEEEECCCCCCE ELRGYLRSGGTGLSETWSYLLPPG EEEEEEECCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852