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The map label for this gene is yacF [C]

Identifier: 17547548

GI number: 17547548

Start: 3043186

End: 3043944

Strand: Direct

Name: yacF [C]

Synonym: RSc2829

Alternate gene names: 17547548

Gene position: 3043186-3043944 (Clockwise)

Preceding gene: 17547547

Following gene: 17547549

Centisome position: 81.89

GC content: 63.24

Gene sequence:

>759_bases
TTGATTCTGTACGAATACCCCTTCAACGAACGCATTCGGACGCTGCTGCGCCTCGAAGACCTGTTCGAGCGGCTGGATTT
CTTTCTCACGCAGGAACACCCGCTGCAGCACCATGTGGCGCTGACCACGCTGTTCGAGATCGTGGACGTGGCCGGCCGCG
CCGACCTCAAGTCCGACCTGCTCAAGGAACTGGACCGTCAGCGCCAGACGCTGACCGTGCTGCGCAGCAATCCGCAGATC
GACCAGGAAGCGCTCGACGCCGTGATCGCCGAACTGGAAACGGCGTCCGGTAACCTCACCGCCACACACGGCAAGGCCGG
CCAGCTGATCGCCGACAACGAATGGCTGACCAGCATCCGCAGCCGCGCCATCATCCCGGGCGGGACATGCGAGTTCGACC
TGCCGGCGTATTTTGCATGGCAGCATCATCCCGGCGAGCGCCGCCGTGCCGACATCGTCAAATGGGCGCAGCCGCTCGTA
CCGCTGCGCGACGCCACGATGATCGTGCTGCGCCTGCTGCGCGAATCCGGCCAGAGCGGCAAGGTGATCGCCAATGCCGG
CAGCTACCAGCAGATGCTATCCGGCCGGATCTATCAACTGATGCAAGTGCGCCTGGACGATGTCGCGCTGGGCTTCATCC
CCGAGATCAGTGCCAACAAGTACATGCTCTGGGTGCGCTTCACCCAGCAGGATGGCGATCTGCGGCCCAAGCCGGTCGAT
GCGGACATCCCGTTCCAGCTCAAGCTCTGCAACTTCTGA

Upstream 100 bases:

>100_bases
CCTCGAATCCCGCTGCATTGTGATGCGCGAGGGTCTCGCATAGAATGCGGGCAGATCGAGGCCAAACGGGCTTCGTACGA
TCCAAGGCGGGCCTCCAGTT

Downstream 100 bases:

>100_bases
GCCGTCGCCCATGAATATGAAGACCGTCAAATGCCCGACCTGCGGCAAGCCGGTGCCCTGGACACCCGAAAGCCGCTACC
GCCCGTTCTGCTCCGAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MILYEYPFNERIRTLLRLEDLFERLDFFLTQEHPLQHHVALTTLFEIVDVAGRADLKSDLLKELDRQRQTLTVLRSNPQI
DQEALDAVIAELETASGNLTATHGKAGQLIADNEWLTSIRSRAIIPGGTCEFDLPAYFAWQHHPGERRRADIVKWAQPLV
PLRDATMIVLRLLRESGQSGKVIANAGSYQQMLSGRIYQLMQVRLDDVALGFIPEISANKYMLWVRFTQQDGDLRPKPVD
ADIPFQLKLCNF

Sequences:

>Translated_252_residues
MILYEYPFNERIRTLLRLEDLFERLDFFLTQEHPLQHHVALTTLFEIVDVAGRADLKSDLLKELDRQRQTLTVLRSNPQI
DQEALDAVIAELETASGNLTATHGKAGQLIADNEWLTSIRSRAIIPGGTCEFDLPAYFAWQHHPGERRRADIVKWAQPLV
PLRDATMIVLRLLRESGQSGKVIANAGSYQQMLSGRIYQLMQVRLDDVALGFIPEISANKYMLWVRFTQQDGDLRPKPVD
ADIPFQLKLCNF
>Mature_252_residues
MILYEYPFNERIRTLLRLEDLFERLDFFLTQEHPLQHHVALTTLFEIVDVAGRADLKSDLLKELDRQRQTLTVLRSNPQI
DQEALDAVIAELETASGNLTATHGKAGQLIADNEWLTSIRSRAIIPGGTCEFDLPAYFAWQHHPGERRRADIVKWAQPLV
PLRDATMIVLRLLRESGQSGKVIANAGSYQQMLSGRIYQLMQVRLDDVALGFIPEISANKYMLWVRFTQQDGDLRPKPVD
ADIPFQLKLCNF

Specific function: Unknown

COG id: COG4582

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0289 family

Homologues:

Organism=Escherichia coli, GI1786291, Length=253, Percent_Identity=32.8063241106719, Blast_Score=126, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2829_RALSO (Q8XVK1)

Other databases:

- EMBL:   AL646052
- RefSeq:   NP_520950.1
- ProteinModelPortal:   Q8XVK1
- SMR:   Q8XVK1
- GeneID:   1221677
- GenomeReviews:   AL646052_GR
- KEGG:   rso:RSc2829
- NMPDR:   fig|267608.1.peg.2829
- HOGENOM:   HBG432810
- OMA:   CYPTISG
- ProtClustDB:   PRK05287
- BioCyc:   RSOL267608:RSC2829-MONOMER
- HAMAP:   MF_01092
- InterPro:   IPR009777

Pfam domain/function: PF07072 DUF1342

EC number: NA

Molecular weight: Translated: 28826; Mature: 28826

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILYEYPFNERIRTLLRLEDLFERLDFFLTQEHPLQHHVALTTLFEIVDVAGRADLKSDL
CEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
LKELDRQRQTLTVLRSNPQIDQEALDAVIAELETASGNLTATHGKAGQLIADNEWLTSIR
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCEEECHHHHHHHH
SRAIIPGGTCEFDLPAYFAWQHHPGERRRADIVKWAQPLVPLRDATMIVLRLLRESGQSG
HCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC
KVIANAGSYQQMLSGRIYQLMQVRLDDVALGFIPEISANKYMLWVRFTQQDGDLRPKPVD
CEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCC
ADIPFQLKLCNF
CCCCEEEEECCC
>Mature Secondary Structure
MILYEYPFNERIRTLLRLEDLFERLDFFLTQEHPLQHHVALTTLFEIVDVAGRADLKSDL
CEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
LKELDRQRQTLTVLRSNPQIDQEALDAVIAELETASGNLTATHGKAGQLIADNEWLTSIR
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCEEECHHHHHHHH
SRAIIPGGTCEFDLPAYFAWQHHPGERRRADIVKWAQPLVPLRDATMIVLRLLRESGQSG
HCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC
KVIANAGSYQQMLSGRIYQLMQVRLDDVALGFIPEISANKYMLWVRFTQQDGDLRPKPVD
CEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCC
ADIPFQLKLCNF
CCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852