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The map label for this gene is ypjD [C]

Identifier: 17547529

GI number: 17547529

Start: 3023524

End: 3024435

Strand: Reverse

Name: ypjD [C]

Synonym: RSc2810

Alternate gene names: 17547529

Gene position: 3024435-3023524 (Counterclockwise)

Preceding gene: 17547532

Following gene: 17547528

Centisome position: 81.38

GC content: 68.86

Gene sequence:

>912_bases
ATGGTGATTGTACTGTATGCGCTGACAGCGCTTCTCTACGGGGCCCTCGCCTGGTACGCGTGGGCGCGTCGCGGCGGCCT
CGAGGCCCAGGCAGCGGGTGCCCTGGTGTCCGGCGGCCAGCCTTTGGCCGGCGCGGCCGTGCTGGTGCCGCCCCCGCCGC
CGGCCGCCGAATCCGGCCCCGCCTGGTGGCGCTGGGCCCTGCTGGGTGCGCTGGCGGTGCACGGGATGCTGCTGCACGAG
ACCATCTTCCCGGCCGCTTCCATGAAGTTCGGCTTCGCCTATGCGCTGTCGTCCATGCTGTGGCTCGGCGTCGGCATCTA
CTGGATCGAGAGCCTGTTCTTCTCGCTGGCGGGCCTGGGCCTGCTGGTGATGCCGGTCGCGCTGGTCGGCAGCCTGCTGC
CGCTGGCGTTCCCGGGCACGCAGATCCTCGGCTATGCCGCCAGCCCGCTGTTCAAGCTGCACTTCGCCATCGCGAACGTG
GCCTACGGGCTGTTCACGCTGGCGGCCTTCCACGCCATCCTGATGCTGGCCGCCGAGCGCCGCCTGCATACCATCAACCG
GCCGGCGGAATCCGGCTGGCTCGGGCGCTGGCTGGATCTGCTGCCGCCGCTGCTGACGCTGGAGAAGCTGCTGTTCCGTC
TGATCGGCGCGGGGTTCGTGCTGCTCACGCTGACGATCGCCTCGGGCATGCTGTTCTCCGAGCAGTTGTTTGGCCGGGCG
TTCCATGTCGATCACAAGACCGTCTTCGCCATCCTGTCGTGGGCGATGTTCGGCGGCATCCTGATCGGCCGCCGTTTCTA
CGGCTGGCGCGGGCGCGTGGCGCTGCGCTGGGTGATGGCGGCCTTTGCGACGCTGATGCTGGCCTATGTCGGCAGCCGCT
TCGTGCTGGAAGTCATCTTGCATCGCGCATAG

Upstream 100 bases:

>100_bases
GAATGTGCGCCCCGCGTGGCCACGATGCCGGACCCGGTCGGTGGGCCGGCAGGCGGTGTGCGCCGGCCAAAAGGTCAGGC
CGCTGCGGTAAACTGCGCAA

Downstream 100 bases:

>100_bases
CGCGCCCGCTCGCGGTTCCGTCCTTCGTTCCTCCACCATGGCCCGTCCCGTCCTGCTGATCCTGCTGCTGCTCGCCGGCC
TGTGGTGGCTCAGCCGCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF5 [H]

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MVIVLYALTALLYGALAWYAWARRGGLEAQAAGALVSGGQPLAGAAVLVPPPPPAAESGPAWWRWALLGALAVHGMLLHE
TIFPAASMKFGFAYALSSMLWLGVGIYWIESLFFSLAGLGLLVMPVALVGSLLPLAFPGTQILGYAASPLFKLHFAIANV
AYGLFTLAAFHAILMLAAERRLHTINRPAESGWLGRWLDLLPPLLTLEKLLFRLIGAGFVLLTLTIASGMLFSEQLFGRA
FHVDHKTVFAILSWAMFGGILIGRRFYGWRGRVALRWVMAAFATLMLAYVGSRFVLEVILHRA

Sequences:

>Translated_303_residues
MVIVLYALTALLYGALAWYAWARRGGLEAQAAGALVSGGQPLAGAAVLVPPPPPAAESGPAWWRWALLGALAVHGMLLHE
TIFPAASMKFGFAYALSSMLWLGVGIYWIESLFFSLAGLGLLVMPVALVGSLLPLAFPGTQILGYAASPLFKLHFAIANV
AYGLFTLAAFHAILMLAAERRLHTINRPAESGWLGRWLDLLPPLLTLEKLLFRLIGAGFVLLTLTIASGMLFSEQLFGRA
FHVDHKTVFAILSWAMFGGILIGRRFYGWRGRVALRWVMAAFATLMLAYVGSRFVLEVILHRA
>Mature_303_residues
MVIVLYALTALLYGALAWYAWARRGGLEAQAAGALVSGGQPLAGAAVLVPPPPPAAESGPAWWRWALLGALAVHGMLLHE
TIFPAASMKFGFAYALSSMLWLGVGIYWIESLFFSLAGLGLLVMPVALVGSLLPLAFPGTQILGYAASPLFKLHFAIANV
AYGLFTLAAFHAILMLAAERRLHTINRPAESGWLGRWLDLLPPLLTLEKLLFRLIGAGFVLLTLTIASGMLFSEQLFGRA
FHVDHKTVFAILSWAMFGGILIGRRFYGWRGRVALRWVMAAFATLMLAYVGSRFVLEVILHRA

Specific function: Unknown

COG id: COG4137

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 32891; Mature: 32891

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIVLYALTALLYGALAWYAWARRGGLEAQAAGALVSGGQPLAGAAVLVPPPPPAAESGP
CEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHCCCCCCCCCEEEECCCCCCCCCCC
AWWRWALLGALAVHGMLLHETIFPAASMKFGFAYALSSMLWLGVGIYWIESLFFSLAGLG
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLVMPVALVGSLLPLAFPGTQILGYAASPLFKLHFAIANVAYGLFTLAAFHAILMLAAER
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLHTINRPAESGWLGRWLDLLPPLLTLEKLLFRLIGAGFVLLTLTIASGMLFSEQLFGRA
HHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FHVDHKTVFAILSWAMFGGILIGRRFYGWRGRVALRWVMAAFATLMLAYVGSRFVLEVIL
HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRA
HCC
>Mature Secondary Structure
MVIVLYALTALLYGALAWYAWARRGGLEAQAAGALVSGGQPLAGAAVLVPPPPPAAESGP
CEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHCCCCCCCCCEEEECCCCCCCCCCC
AWWRWALLGALAVHGMLLHETIFPAASMKFGFAYALSSMLWLGVGIYWIESLFFSLAGLG
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLVMPVALVGSLLPLAFPGTQILGYAASPLFKLHFAIANVAYGLFTLAAFHAILMLAAER
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLHTINRPAESGWLGRWLDLLPPLLTLEKLLFRLIGAGFVLLTLTIASGMLFSEQLFGRA
HHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FHVDHKTVFAILSWAMFGGILIGRRFYGWRGRVALRWVMAAFATLMLAYVGSRFVLEVIL
HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRA
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7553451 [H]