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The map label for this gene is 17547515

Identifier: 17547515

GI number: 17547515

Start: 3005603

End: 3006352

Strand: Direct

Name: 17547515

Synonym: RSc2796

Alternate gene names: NA

Gene position: 3005603-3006352 (Clockwise)

Preceding gene: 17547514

Following gene: 17547516

Centisome position: 80.87

GC content: 72.67

Gene sequence:

>750_bases
ATGCGCGCACCCGCCTTCTTGTTGAGATCGAGCCCACCGAGTCGTGGGGTTTTCCCGCAGTACCGGCGGTTGGCACGGCG
GACGCCGGGCATCCTGGTGATCGTGTCGCTGGTCGGGATCGCAGGCTGCGCCACGTCGGACAGCGGTGACATGGGCACAT
CGCTAGGCGGCAGCGGCTCGCAGTCGACGTTATCGCTGACGGTACCGGATTCACCGACCTGGTCGAACGACAGCGGCACG
ACCGACAGCAGCAGCAGCGGCGCGGCCGGCAGCACCACGCCGGTTGAGCAGGTCACGACCGTTGCCGTCACCGCCATCCT
GCCGCTCGCCAGCACGCTGACCTCGGCCACGCAGACGCTCGGCGCGACCACCGGGCTCGGCGCACCGGTGAGCAGCGTGC
TGACGACGCTGGGCAGCGCGCTCGGCAGCGAAGGCGGCACCCTCACCCAGGCCGGCAAGGGCAATGCGCTGACATCCACG
CTGGGCAGCACGGTGAGCGCGCTGGGCACGCTCACCGATTCGCTCGCCGCGGTGGCGACGCCGGCCGCCTCGTCATCCGG
CGGCAGCGCGCCGGGCGGCGCGCTGGGGAATGCGCTGGCCCCCGTGATCACGGCCGTCGGCAGCCTGACGGCCAGCCTGT
CCGGTGCCGGCACGGGCAGTCCGCTGGGCGCACTGGGCAGCGCCGGCACGACGCTCGGCGGACTGGTCGGCGGCGGGCTG
TCGGGTGTCGTGCCCGATACGCGCCACTAG

Upstream 100 bases:

>100_bases
AGCCGTCGCAAGGGACATCACCACGGCGACCGCCTCCCCGAAGACCAGAGAGCGCAAACAAAGGGGTCCCAACAAGCGTT
CTGAATTGTGGAGGAACAAG

Downstream 100 bases:

>100_bases
CGATCGCGCACGGCTTACCGATTTGTTTGGGTTTTTTTCGGCATCCGGCAACCATGGCCACTGGATGCCCCCAACCGGCG
CCAGACGCGCGTTCCTCTGA

Product: hemagglutinin-related transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MRAPAFLLRSSPPSRGVFPQYRRLARRTPGILVIVSLVGIAGCATSDSGDMGTSLGGSGSQSTLSLTVPDSPTWSNDSGT
TDSSSSGAAGSTTPVEQVTTVAVTAILPLASTLTSATQTLGATTGLGAPVSSVLTTLGSALGSEGGTLTQAGKGNALTST
LGSTVSALGTLTDSLAAVATPAASSSGGSAPGGALGNALAPVITAVGSLTASLSGAGTGSPLGALGSAGTTLGGLVGGGL
SGVVPDTRH

Sequences:

>Translated_249_residues
MRAPAFLLRSSPPSRGVFPQYRRLARRTPGILVIVSLVGIAGCATSDSGDMGTSLGGSGSQSTLSLTVPDSPTWSNDSGT
TDSSSSGAAGSTTPVEQVTTVAVTAILPLASTLTSATQTLGATTGLGAPVSSVLTTLGSALGSEGGTLTQAGKGNALTST
LGSTVSALGTLTDSLAAVATPAASSSGGSAPGGALGNALAPVITAVGSLTASLSGAGTGSPLGALGSAGTTLGGLVGGGL
SGVVPDTRH
>Mature_249_residues
MRAPAFLLRSSPPSRGVFPQYRRLARRTPGILVIVSLVGIAGCATSDSGDMGTSLGGSGSQSTLSLTVPDSPTWSNDSGT
TDSSSSGAAGSTTPVEQVTTVAVTAILPLASTLTSATQTLGATTGLGAPVSSVLTTLGSALGSEGGTLTQAGKGNALTST
LGSTVSALGTLTDSLAAVATPAASSSGGSAPGGALGNALAPVITAVGSLTASLSGAGTGSPLGALGSAGTTLGGLVGGGL
SGVVPDTRH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23381; Mature: 23381

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAPAFLLRSSPPSRGVFPQYRRLARRTPGILVIVSLVGIAGCATSDSGDMGTSLGGSGS
CCCCCCCEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
QSTLSLTVPDSPTWSNDSGTTDSSSSGAAGSTTPVEQVTTVAVTAILPLASTLTSATQTL
CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GATTGLGAPVSSVLTTLGSALGSEGGTLTQAGKGNALTSTLGSTVSALGTLTDSLAAVAT
CCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
PAASSSGGSAPGGALGNALAPVITAVGSLTASLSGAGTGSPLGALGSAGTTLGGLVGGGL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHCCCC
SGVVPDTRH
CCCCCCCCC
>Mature Secondary Structure
MRAPAFLLRSSPPSRGVFPQYRRLARRTPGILVIVSLVGIAGCATSDSGDMGTSLGGSGS
CCCCCCCEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
QSTLSLTVPDSPTWSNDSGTTDSSSSGAAGSTTPVEQVTTVAVTAILPLASTLTSATQTL
CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GATTGLGAPVSSVLTTLGSALGSEGGTLTQAGKGNALTSTLGSTVSALGTLTDSLAAVAT
CCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
PAASSSGGSAPGGALGNALAPVITAVGSLTASLSGAGTGSPLGALGSAGTTLGGLVGGGL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHCCCC
SGVVPDTRH
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA