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The map label for this gene is pcp [H]

Identifier: 17547511

GI number: 17547511

Start: 3002559

End: 3003026

Strand: Direct

Name: pcp [H]

Synonym: RSc2792

Alternate gene names: 17547511

Gene position: 3002559-3003026 (Clockwise)

Preceding gene: 17547510

Following gene: 17547513

Centisome position: 80.79

GC content: 69.87

Gene sequence:

>468_bases
ATGAACACCACCCTTCGCATCGGCGCCGCCGCCCTGCTGGTCACGGCCCTCGGCCTGCAAGGTTGCGCCACGGGCAGCAA
CTCCAACAGCGCTTACACGTCCTACCAGGCACAGCGCGAGCAGACCGTACGCTTCGGCACCGTGGAGTCGGTCCGCAATG
TCGTGATCGACCGTGAACAGACCGGTGTCGGCACGCTGGCCGGCGGTGCGGTCGGTGGCATCGGTTCGGCAGCGGCCATC
GGGCGCGGCAACGGCTCGGTGGCGGCAGGCATCCTGGGCGCCATCGCGGGCGGCATCGCCGGCAGCGCCATCGAGGGCCA
GGTGAACAAGCGCCCGGGCCTGGAGATCACCGTCAAACTGGACAACGGCGAGTACCGCGCCATCACGCAGGAAGCGGACG
AAGCGTTCCGCCCCGGCGAACGGGTGCGCCTACTGTCGTCGGGCGGCGTGACCCGCGTGACGCACTGA

Upstream 100 bases:

>100_bases
GATCGCATGCCAGGGGCCGCAGAACCACGGCCTGCCTGTCGACGAGATTGCCCGGCGCTTTGAATCCGCCTTCGGATACC
GGTATCAATAAGGAATCGAT

Downstream 100 bases:

>100_bases
GCGGCTGCCCCGCCCGGCCGCCAACCTGCGGCGCGTCGCGAGGTATCAGCAAGACCGCATCGGCCTGTGCCGGTGCGGTT
TTTTTACGCCCGTGCCACGG

Product: outer membrane lipoprotein transmembrane

Products: NA

Alternate protein names: 15 kDa lipoprotein; PAL cross-reacting lipoprotein [H]

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MNTTLRIGAAALLVTALGLQGCATGSNSNSAYTSYQAQREQTVRFGTVESVRNVVIDREQTGVGTLAGGAVGGIGSAAAI
GRGNGSVAAGILGAIAGGIAGSAIEGQVNKRPGLEITVKLDNGEYRAITQEADEAFRPGERVRLLSSGGVTRVTH

Sequences:

>Translated_155_residues
MNTTLRIGAAALLVTALGLQGCATGSNSNSAYTSYQAQREQTVRFGTVESVRNVVIDREQTGVGTLAGGAVGGIGSAAAI
GRGNGSVAAGILGAIAGGIAGSAIEGQVNKRPGLEITVKLDNGEYRAITQEADEAFRPGERVRLLSSGGVTRVTH
>Mature_155_residues
MNTTLRIGAAALLVTALGLQGCATGSNSNSAYTSYQAQREQTVRFGTVESVRNVVIDREQTGVGTLAGGAVGGIGSAAAI
GRGNGSVAAGILGAIAGGIAGSAIEGQVNKRPGLEITVKLDNGEYRAITQEADEAFRPGERVRLLSSGGVTRVTH

Specific function: Unknown

COG id: COG3133

COG function: function code M; Outer membrane lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pcp/slyB lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008816 [H]

Pfam domain/function: PF05433 Rick_17kDa_Anti [H]

EC number: NA

Molecular weight: Translated: 15627; Mature: 15627

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTLRIGAAALLVTALGLQGCATGSNSNSAYTSYQAQREQTVRFGTVESVRNVVIDREQ
CCCEEHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHCCCC
TGVGTLAGGAVGGIGSAAAIGRGNGSVAAGILGAIAGGIAGSAIEGQVNKRPGLEITVKL
CCCEEECCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE
DNGEYRAITQEADEAFRPGERVRLLSSGGVTRVTH
CCCCEEEEHHHHHHHHCCCCEEEEECCCCEEECCC
>Mature Secondary Structure
MNTTLRIGAAALLVTALGLQGCATGSNSNSAYTSYQAQREQTVRFGTVESVRNVVIDREQ
CCCEEHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHCCCC
TGVGTLAGGAVGGIGSAAAIGRGNGSVAAGILGAIAGGIAGSAIEGQVNKRPGLEITVKL
CCCEEECCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE
DNGEYRAITQEADEAFRPGERVRLLSSGGVTRVTH
CCCCEEEEHHHHHHHHCCCCEEEEECCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2828309; 7542800 [H]