BacMap

Definition	Ralstonia solanacearum GMI1000, complete genome.
Accession	NC_003295
Length	3,716,413

Click here to switch to the map view.

The map label for this gene is fabG [H]

Identifier: 17547472

GI number: 17547472

Start: 2964743

End: 2965540

Strand: Reverse

Name: fabG [H]

Synonym: RSc2753

Alternate gene names: 17547472

Gene position: 2965540-2964743 (Counterclockwise)

Preceding gene: 17547473

Following gene: 17547471

Centisome position: 79.8

GC content: 71.3

Gene sequence:

>798_bases
ATGACGGCGCCCCCGACATCCTTCCCGCCGCGCCTGGCCGGCAAGGTCGCGCTGGTGACCGGCGCCACGCAGGGCATCGG
CGCCGCCACCGCGCGGCTGTTCGCGCGGCACGGCGCGCGCGTGATCGTCAATGCGCTGGTGCGCGACGCCGCCGCCGAGG
CCTTCGCCGCGTCCATCGGCCACGACGGCAACGTGCTGCTGGTGCAGGCCGACGTGCGCTATCGCGACCAGGCCGATGCC
ATGGTCGCGGCGGGCGTCGCGCGCTTCGGCGGCATCGACGTGCTGGTCAACAATGCCGGCATCAATGTCTTCTCCGATCC
GCTCGCGCTGTCCGAGGCGGATTGGGCGCGCTGCCTGTCGGTCGACCTGGAAGGCGCATGGCATTGCGCGCGCGCCGTGC
TGCCGCACATGCTGGCGCGCGGCGCCGGCAGCATCGTCAACATCGCTTCGGTGCACGGGCATAAGATCATCCCGGGGGCG
TTTCCGTATCCGGTGGCCAAGCATGGCCTGATCGGGCTCACGCGGGCGCTGGGCATCGAGTACGCGGCGCGCGGCATCCG
TGTCAATTCGATCTCGCCGGGGCTGATCCTCACGCCGATCGCCGAGGCCGGCTTTGCCGCCGCGCCCGACCCCGAGGCCG
AACGCCGCCGCCAGGCCGACCTGCTGCCGTGCAAGCGCATCGGCGAGCCGGAGGAGGTGGCCTACACCGCGCTGTTCCTC
GCCTCCGACGAGGCGCGCTTCATCAACGCCGCCGACATCCTGATCGATGGCGCTCGCTCGCAGCTGTATCACGAATGA

Upstream 100 bases:

>100_bases
TGCCGGGCCGGCCGCAGGACCACGGCCTGACCGTGCTGGCCACCGGCCAGAGCCTGCGGCGCGACTATCGCTTCACCGTC
ACCCCTTTCCGGACCGACAC

Downstream 100 bases:

>100_bases
CGATGACCTGGACTGCCCATCTTCCGCTGATCGCCATCCTGCGCGGCATCCGCCCCGACGAGGTGCTGGCGCACGCGCAG
GCGCTCGTCGGTGCCGGTTT

Product: short chain dehydrogenase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MTAPPTSFPPRLAGKVALVTGATQGIGAATARLFARHGARVIVNALVRDAAAEAFAASIGHDGNVLLVQADVRYRDQADA
MVAAGVARFGGIDVLVNNAGINVFSDPLALSEADWARCLSVDLEGAWHCARAVLPHMLARGAGSIVNIASVHGHKIIPGA
FPYPVAKHGLIGLTRALGIEYAARGIRVNSISPGLILTPIAEAGFAAAPDPEAERRRQADLLPCKRIGEPEEVAYTALFL
ASDEARFINAADILIDGARSQLYHE

Sequences:

>Translated_265_residues
MTAPPTSFPPRLAGKVALVTGATQGIGAATARLFARHGARVIVNALVRDAAAEAFAASIGHDGNVLLVQADVRYRDQADA
MVAAGVARFGGIDVLVNNAGINVFSDPLALSEADWARCLSVDLEGAWHCARAVLPHMLARGAGSIVNIASVHGHKIIPGA
FPYPVAKHGLIGLTRALGIEYAARGIRVNSISPGLILTPIAEAGFAAAPDPEAERRRQADLLPCKRIGEPEEVAYTALFL
ASDEARFINAADILIDGARSQLYHE
>Mature_264_residues
TAPPTSFPPRLAGKVALVTGATQGIGAATARLFARHGARVIVNALVRDAAAEAFAASIGHDGNVLLVQADVRYRDQADAM
VAAGVARFGGIDVLVNNAGINVFSDPLALSEADWARCLSVDLEGAWHCARAVLPHMLARGAGSIVNIASVHGHKIIPGAF
PYPVAKHGLIGLTRALGIEYAARGIRVNSISPGLILTPIAEAGFAAAPDPEAERRRQADLLPCKRIGEPEEVAYTALFLA
SDEARFINAADILIDGARSQLYHE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=247, Percent_Identity=36.8421052631579, Blast_Score=148, Evalue=5e-36,
Organism=Homo sapiens, GI19923817, Length=267, Percent_Identity=32.2097378277154, Blast_Score=133, Evalue=2e-31,
Organism=Homo sapiens, GI5031737, Length=252, Percent_Identity=32.5396825396825, Blast_Score=119, Evalue=3e-27,
Organism=Homo sapiens, GI126723750, Length=250, Percent_Identity=32.8, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI126723191, Length=194, Percent_Identity=37.1134020618557, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI66933014, Length=251, Percent_Identity=33.0677290836653, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI59889578, Length=227, Percent_Identity=33.0396475770925, Blast_Score=108, Evalue=6e-24,
Organism=Homo sapiens, GI15277342, Length=261, Percent_Identity=32.5670498084291, Blast_Score=105, Evalue=3e-23,
Organism=Homo sapiens, GI33667109, Length=223, Percent_Identity=31.390134529148, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI10190704, Length=253, Percent_Identity=30.8300395256917, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI40254992, Length=244, Percent_Identity=32.3770491803279, Blast_Score=99, Evalue=3e-21,
Organism=Homo sapiens, GI4758504, Length=260, Percent_Identity=32.3076923076923, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI109715829, Length=253, Percent_Identity=30.0395256916996, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI31542939, Length=197, Percent_Identity=33.502538071066, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI4503301, Length=264, Percent_Identity=29.1666666666667, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI4504505, Length=193, Percent_Identity=35.2331606217617, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI142976729, Length=240, Percent_Identity=26.6666666666667, Blast_Score=85, Evalue=5e-17,
Organism=Homo sapiens, GI7705925, Length=256, Percent_Identity=26.5625, Blast_Score=85, Evalue=7e-17,
Organism=Homo sapiens, GI210032110, Length=206, Percent_Identity=28.6407766990291, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI302344755, Length=120, Percent_Identity=39.1666666666667, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI7706318, Length=201, Percent_Identity=30.3482587064677, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI224922801, Length=168, Percent_Identity=32.7380952380952, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI83715985, Length=259, Percent_Identity=30.1158301158301, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI20149619, Length=201, Percent_Identity=30.3482587064677, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI40254986, Length=197, Percent_Identity=29.4416243654822, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI157739938, Length=190, Percent_Identity=24.7368421052632, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI87082100, Length=254, Percent_Identity=39.7637795275591, Blast_Score=166, Evalue=2e-42,
Organism=Escherichia coli, GI1787335, Length=244, Percent_Identity=34.8360655737705, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI87082160, Length=247, Percent_Identity=31.5789473684211, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1788459, Length=246, Percent_Identity=31.3008130081301, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1789208, Length=253, Percent_Identity=32.4110671936759, Blast_Score=117, Evalue=6e-28,
Organism=Escherichia coli, GI1790717, Length=248, Percent_Identity=32.258064516129, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI2367175, Length=251, Percent_Identity=34.2629482071713, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1787905, Length=251, Percent_Identity=29.8804780876494, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI2367365, Length=249, Percent_Identity=33.3333333333333, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1786812, Length=259, Percent_Identity=32.4324324324324, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1789378, Length=243, Percent_Identity=29.2181069958848, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1787820, Length=229, Percent_Identity=30.1310043668122, Blast_Score=88, Evalue=7e-19,
Organism=Escherichia coli, GI1789057, Length=264, Percent_Identity=28.4090909090909, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1786701, Length=188, Percent_Identity=29.7872340425532, Blast_Score=67, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17560676, Length=258, Percent_Identity=32.5581395348837, Blast_Score=140, Evalue=5e-34,
Organism=Caenorhabditis elegans, GI17561402, Length=250, Percent_Identity=34, Blast_Score=130, Evalue=7e-31,
Organism=Caenorhabditis elegans, GI17538480, Length=264, Percent_Identity=32.9545454545455, Blast_Score=126, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17551412, Length=267, Percent_Identity=31.4606741573034, Blast_Score=122, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17562904, Length=269, Percent_Identity=33.457249070632, Blast_Score=121, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17562910, Length=268, Percent_Identity=33.2089552238806, Blast_Score=117, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI25147288, Length=251, Percent_Identity=32.6693227091633, Blast_Score=115, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=32.7935222672065, Blast_Score=114, Evalue=6e-26,
Organism=Caenorhabditis elegans, GI17559104, Length=269, Percent_Identity=33.0855018587361, Blast_Score=113, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17562906, Length=266, Percent_Identity=30.4511278195489, Blast_Score=111, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI72000259, Length=266, Percent_Identity=29.6992481203008, Blast_Score=110, Evalue=6e-25,
Organism=Caenorhabditis elegans, GI17560332, Length=268, Percent_Identity=32.4626865671642, Blast_Score=109, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI71994600, Length=253, Percent_Identity=29.6442687747036, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI193204405, Length=268, Percent_Identity=31.3432835820896, Blast_Score=107, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI17563726, Length=265, Percent_Identity=29.4339622641509, Blast_Score=106, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI71994604, Length=254, Percent_Identity=31.1023622047244, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17562908, Length=264, Percent_Identity=30.6818181818182, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17531453, Length=266, Percent_Identity=30.4511278195489, Blast_Score=100, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI17538486, Length=268, Percent_Identity=31.3432835820896, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17560150, Length=270, Percent_Identity=28.5185185185185, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17544670, Length=269, Percent_Identity=28.996282527881, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17565030, Length=264, Percent_Identity=29.9242424242424, Blast_Score=98, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17562990, Length=267, Percent_Identity=28.8389513108614, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17560220, Length=264, Percent_Identity=29.9242424242424, Blast_Score=94, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI17536651, Length=274, Percent_Identity=28.8321167883212, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17536025, Length=257, Percent_Identity=29.5719844357977, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17568967, Length=192, Percent_Identity=33.8541666666667, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI115534694, Length=253, Percent_Identity=29.6442687747036, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17561272, Length=261, Percent_Identity=31.0344827586207, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17538182, Length=258, Percent_Identity=30.6201550387597, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17564282, Length=232, Percent_Identity=28.8793103448276, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17508651, Length=247, Percent_Identity=26.7206477732794, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17567345, Length=195, Percent_Identity=26.6666666666667, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17508895, Length=214, Percent_Identity=28.0373831775701, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI193203117, Length=193, Percent_Identity=26.4248704663212, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71982365, Length=217, Percent_Identity=26.7281105990783, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI193203115, Length=190, Percent_Identity=26.8421052631579, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=262, Percent_Identity=29.3893129770992, Blast_Score=95, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6323882, Length=197, Percent_Identity=30.9644670050761, Blast_Score=80, Evalue=5e-16,
Organism=Saccharomyces cerevisiae, GI6324126, Length=258, Percent_Identity=25.5813953488372, Blast_Score=77, Evalue=2e-15,
Organism=Drosophila melanogaster, GI23397609, Length=254, Percent_Identity=37.007874015748, Blast_Score=133, Evalue=1e-31,
Organism=Drosophila melanogaster, GI24644339, Length=253, Percent_Identity=33.596837944664, Blast_Score=129, Evalue=1e-30,
Organism=Drosophila melanogaster, GI21357041, Length=258, Percent_Identity=34.8837209302326, Blast_Score=125, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24639444, Length=250, Percent_Identity=35.2, Blast_Score=117, Evalue=6e-27,
Organism=Drosophila melanogaster, GI21355319, Length=249, Percent_Identity=31.3253012048193, Blast_Score=117, Evalue=8e-27,
Organism=Drosophila melanogaster, GI28571526, Length=252, Percent_Identity=32.9365079365079, Blast_Score=113, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24643142, Length=249, Percent_Identity=31.3253012048193, Blast_Score=101, Evalue=7e-22,
Organism=Drosophila melanogaster, GI18859837, Length=203, Percent_Identity=33.9901477832512, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI21358495, Length=245, Percent_Identity=28.1632653061224, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI17737361, Length=256, Percent_Identity=31.640625, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24644337, Length=261, Percent_Identity=30.6513409961686, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI116007236, Length=211, Percent_Identity=30.3317535545024, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI21357673, Length=197, Percent_Identity=27.9187817258883, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24648693, Length=213, Percent_Identity=33.8028169014084, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI21355889, Length=213, Percent_Identity=33.8028169014084, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI281364494, Length=202, Percent_Identity=30.1980198019802, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24648944, Length=195, Percent_Identity=31.7948717948718, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI116007234, Length=214, Percent_Identity=33.1775700934579, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24580925, Length=213, Percent_Identity=27.6995305164319, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24663911, Length=206, Percent_Identity=30.0970873786408, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24665243, Length=194, Percent_Identity=32.4742268041237, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24665247, Length=194, Percent_Identity=31.4432989690722, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI221331218, Length=196, Percent_Identity=32.1428571428571, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI221331216, Length=196, Percent_Identity=31.1224489795918, Blast_Score=68, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24641232, Length=208, Percent_Identity=28.8461538461538, Blast_Score=67, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 27748; Mature: 27617

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPPTSFPPRLAGKVALVTGATQGIGAATARLFARHGARVIVNALVRDAAAEAFAASIG
CCCCCCCCCCHHCCCEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
HDGNVLLVQADVRYRDQADAMVAAGVARFGGIDVLVNNAGINVFSDPLALSEADWARCLS
CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEEECCCCEEECCCCCCCCCCHHHEEE
VDLEGAWHCARAVLPHMLARGAGSIVNIASVHGHKIIPGAFPYPVAKHGLIGLTRALGIE
ECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCEECCCCCCCCHHHCCHHHHHHHHHHH
YAARGIRVNSISPGLILTPIAEAGFAAAPDPEAERRRQADLLPCKRIGEPEEVAYTALFL
HHHCCEEEECCCCCEEEECCHHCCCCCCCCCHHHHHHHCCCCCHHHCCCHHHHEEEEEEE
ASDEARFINAADILIDGARSQLYHE
ECCCCCEEEHHHHEEECCHHHCCCC
>Mature Secondary Structure 
TAPPTSFPPRLAGKVALVTGATQGIGAATARLFARHGARVIVNALVRDAAAEAFAASIG
CCCCCCCCCHHCCCEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
HDGNVLLVQADVRYRDQADAMVAAGVARFGGIDVLVNNAGINVFSDPLALSEADWARCLS
CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEEECCCCEEECCCCCCCCCCHHHEEE
VDLEGAWHCARAVLPHMLARGAGSIVNIASVHGHKIIPGAFPYPVAKHGLIGLTRALGIE
ECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCEECCCCCCCCHHHCCHHHHHHHHHHH
YAARGIRVNSISPGLILTPIAEAGFAAAPDPEAERRRQADLLPCKRIGEPEEVAYTALFL
HHHCCEEEECCCCCEEEECCHHCCCCCCCCCHHHHHHHCCCCCHHHCCCHHHHEEEEEEE
ASDEARFINAADILIDGARSQLYHE
ECCCCCEEEHHHHEEECCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]