| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is fhuA [H]
Identifier: 17547448
GI number: 17547448
Start: 2935826
End: 2937895
Strand: Reverse
Name: fhuA [H]
Synonym: RSc2729
Alternate gene names: 17547448
Gene position: 2937895-2935826 (Counterclockwise)
Preceding gene: 17547458
Following gene: 17547447
Centisome position: 79.05
GC content: 70.43
Gene sequence:
>2070_bases ATGGCATTGTTCGGCGCACCCGAACCGGCCGCCGCAGACGATGTTCCGACGCTGGCGCTGGAGGAGGCCGTCGTCCGCGC GCAGGCGGGCGAGCGCTTGCGGGCCCGGCGCGCAACTTCCGCCACGCTGACCGACACGCCGCTCAAGGACGTGCCGCAGT CCGTCGGCGTGGTCACGCGCGCGGCGCTGGACGGCTTCGGCGCGACGCGGCTGGACACGGCGCTCGACTGGGTCAGCGGC ATCAGCCGGCAGAACAACCTGGGCGGCATCGCCGACAACTTCGCCATCCGCGGCTTTGCCGGCGACCTGAACACGGGCTC GGACTACCTCGTCAACGGTTTTTCGGCCAACCGCGCCAACAGCGTGCCGGTGGACACCATCAACATCGCGCGCATCGACG TGCTGAAGGGGCCGTCGGCGGCGCTTTACGGGCGCAGCGATCCGGGCGGCATCGTCAACATCGTCACGCGCACGCCGCAG TTCAAGCCGTCGCGCGAGATCACGCTGGCGGCGGGCAGCCACGACCAGTACCGGCTGGCGACCGAACTGACCGGGCCGCT GTCCGGGCACTTCGCCTACCGGCTGGGCCTGGCAGCGGAGAACAATCACGGCTTCCGGGAGTTTTCCGCCAGCCGGCGCT ATGTGATTGCGCCATCGTTCACGTGGCTGCCCACCGACGACACCGTGGTGACCTATGCCTTCGAGGCGGCGCAGCTCAGG GCACCGTTCGACCGGGGCATCGTGGCGATCAACCGGCAGTTGGGGGCGTTGCCCGATTCGCGCTTCCTGGGCGAGCCGGG CGACGGCGATACCACGGTGCGCACGCAGAGCCACCAGCTGAGCGTCGAACACCAACTGGGCAGCGGCTGGAAAGTGGACG CCGGGCTGTCGTACCGCACCTCGCGCCTGTTCGGCAAATCGTCCGATGCGTCGCGGCTGCTCGACGATGGCCGCACGCTG TGGCGGCAGGCGCGCGAGCGCGACTACCACGCCAACGATCTGGCCGGCCGCGTCGACCTGCAGGGCGAGGTGGCCACCGG ACCCGTCAGGCACACGCTGGTGGCCGGCGCCGACTTCTACAACTTCCGCTACGACCCGGTGCTGTACCGCGCCAACCCGA GCGCATCGGCGCCGTATGCGATCGACATCTTCGATCCCGTGTACGGCCAGCCGCGGCCCGCGCTGCGGCCGAGCAGCAGC ACGCGCGAGTCCCAGCGCGGCTTCGGCGCCTTCGTGCAGGACCAGGTCACGCTGACGCCGCAGTGGAAACTGCTGGCCGG CGTGCGCATGGACCGCTTCCTGCAGCACGCCGACAACCGCCTGACCGGCGCGCGCGTCGCGCAGCAGCAGACCGCCTACA GTCCGCGCCTGGGGCTGGTCTACCAGCCGACGCAGACCCTGTCGCTGTACGCCAATACCGCGCGCTCGTTCCGGCCCAAC ACCGGGGTGGGGGCGCAGGGCAATGCGTTCGCGCCGGAGCGCGGGCGCGGCTACGAGGTCGGCGCCAAGCTGGAGACGGC CGACGGCCGGTTCGGCGGCACGCTGGCGCTGTATTCGATCGACAAGACCAACGTGCTGACCGGCGATTCGCGCGATCCGG TGTTCCAGCGCACCGCCGGCGCGGTGCGCAGCCGGGGCGTCGAGCTCGATGTGTCCGGCCAGCTGACGCCGAACCTCAAG GTGCTGGGCACCTACGCCTATACCGACGCCCGTGTGACGGCGGACACCGTGCTGCCGTCGGGCGCGCCGCTGTCCAACAT CCCGCGCCACAGCGCCAGCGCGCTGGGCCTGTATGAATTCGGCGCGGGATCGCTGGGCCGGGCGGGCGTGGGTGGCGGCG TGGTCTACGTCGGCGAGCGCGCCGGCAACAGCACCGATAACGGCTTCAAGCTGCCGGCCTACGCCACCGTCCGCCTGAAC GGCTACGTGCAGCCGACGCGCGCGCTGCGCCTGTCGCTGACCATCGACAACCTGTTCGACAAGCGCTACTACGCCAGTTC GTACAACGAGCTGTGGGTCGCGCCCGGCGCCGAGCGGCAAGTCACGCTGGCGGCCACCTACACATTTTGA
Upstream 100 bases:
>100_bases TTGCAAATTAACTAAGGTGAGCGCTTTCCGTCACTCGGTGGATGCTATGCAGCGTAGGCGGTATGCGGTCCGTCCGCATC TCGGATGGGGCCTGGTGGGG
Downstream 100 bases:
>100_bases GCATGACGCAATCCGGTTCCCGTGTTGTCGCCGTCGACTTGCTGCGCGGCCTGGTGATGGTGCTGATGGTGATCGACCAC TTGCGCGAATTCTTCTTTCT
Product: ferrichrome-iron receptor protein
Products: NA
Alternate protein names: Ferric hydroxamate receptor; Ferric hydroxamate uptake [H]
Number of amino acids: Translated: 689; Mature: 688
Protein sequence:
>689_residues MALFGAPEPAAADDVPTLALEEAVVRAQAGERLRARRATSATLTDTPLKDVPQSVGVVTRAALDGFGATRLDTALDWVSG ISRQNNLGGIADNFAIRGFAGDLNTGSDYLVNGFSANRANSVPVDTINIARIDVLKGPSAALYGRSDPGGIVNIVTRTPQ FKPSREITLAAGSHDQYRLATELTGPLSGHFAYRLGLAAENNHGFREFSASRRYVIAPSFTWLPTDDTVVTYAFEAAQLR APFDRGIVAINRQLGALPDSRFLGEPGDGDTTVRTQSHQLSVEHQLGSGWKVDAGLSYRTSRLFGKSSDASRLLDDGRTL WRQARERDYHANDLAGRVDLQGEVATGPVRHTLVAGADFYNFRYDPVLYRANPSASAPYAIDIFDPVYGQPRPALRPSSS TRESQRGFGAFVQDQVTLTPQWKLLAGVRMDRFLQHADNRLTGARVAQQQTAYSPRLGLVYQPTQTLSLYANTARSFRPN TGVGAQGNAFAPERGRGYEVGAKLETADGRFGGTLALYSIDKTNVLTGDSRDPVFQRTAGAVRSRGVELDVSGQLTPNLK VLGTYAYTDARVTADTVLPSGAPLSNIPRHSASALGLYEFGAGSLGRAGVGGGVVYVGERAGNSTDNGFKLPAYATVRLN GYVQPTRALRLSLTIDNLFDKRYYASSYNELWVAPGAERQVTLAATYTF
Sequences:
>Translated_689_residues MALFGAPEPAAADDVPTLALEEAVVRAQAGERLRARRATSATLTDTPLKDVPQSVGVVTRAALDGFGATRLDTALDWVSG ISRQNNLGGIADNFAIRGFAGDLNTGSDYLVNGFSANRANSVPVDTINIARIDVLKGPSAALYGRSDPGGIVNIVTRTPQ FKPSREITLAAGSHDQYRLATELTGPLSGHFAYRLGLAAENNHGFREFSASRRYVIAPSFTWLPTDDTVVTYAFEAAQLR APFDRGIVAINRQLGALPDSRFLGEPGDGDTTVRTQSHQLSVEHQLGSGWKVDAGLSYRTSRLFGKSSDASRLLDDGRTL WRQARERDYHANDLAGRVDLQGEVATGPVRHTLVAGADFYNFRYDPVLYRANPSASAPYAIDIFDPVYGQPRPALRPSSS TRESQRGFGAFVQDQVTLTPQWKLLAGVRMDRFLQHADNRLTGARVAQQQTAYSPRLGLVYQPTQTLSLYANTARSFRPN TGVGAQGNAFAPERGRGYEVGAKLETADGRFGGTLALYSIDKTNVLTGDSRDPVFQRTAGAVRSRGVELDVSGQLTPNLK VLGTYAYTDARVTADTVLPSGAPLSNIPRHSASALGLYEFGAGSLGRAGVGGGVVYVGERAGNSTDNGFKLPAYATVRLN GYVQPTRALRLSLTIDNLFDKRYYASSYNELWVAPGAERQVTLAATYTF >Mature_688_residues ALFGAPEPAAADDVPTLALEEAVVRAQAGERLRARRATSATLTDTPLKDVPQSVGVVTRAALDGFGATRLDTALDWVSGI SRQNNLGGIADNFAIRGFAGDLNTGSDYLVNGFSANRANSVPVDTINIARIDVLKGPSAALYGRSDPGGIVNIVTRTPQF KPSREITLAAGSHDQYRLATELTGPLSGHFAYRLGLAAENNHGFREFSASRRYVIAPSFTWLPTDDTVVTYAFEAAQLRA PFDRGIVAINRQLGALPDSRFLGEPGDGDTTVRTQSHQLSVEHQLGSGWKVDAGLSYRTSRLFGKSSDASRLLDDGRTLW RQARERDYHANDLAGRVDLQGEVATGPVRHTLVAGADFYNFRYDPVLYRANPSASAPYAIDIFDPVYGQPRPALRPSSST RESQRGFGAFVQDQVTLTPQWKLLAGVRMDRFLQHADNRLTGARVAQQQTAYSPRLGLVYQPTQTLSLYANTARSFRPNT GVGAQGNAFAPERGRGYEVGAKLETADGRFGGTLALYSIDKTNVLTGDSRDPVFQRTAGAVRSRGVELDVSGQLTPNLKV LGTYAYTDARVTADTVLPSGAPLSNIPRHSASALGLYEFGAGSLGRAGVGGGVVYVGERAGNSTDNGFKLPAYATVRLNG YVQPTRALRLSLTIDNLFDKRYYASSYNELWVAPGAERQVTLAATYTF
Specific function: This receptor binds the ferrichrome-iron ligand. It interacts with the tonB protein, which is responsible for energy coupling of the ferrichrome-promoted iron transport system. Acts as a receptor for bacteriophage T5 as well as T1, phi80 and colicin M. Bi
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=704, Percent_Identity=29.6875, Blast_Score=265, Evalue=8e-72, Organism=Escherichia coli, GI1787024, Length=719, Percent_Identity=24.3393602225313, Blast_Score=122, Evalue=1e-28, Organism=Escherichia coli, GI1790743, Length=687, Percent_Identity=24.1630276564774, Blast_Score=103, Evalue=4e-23, Organism=Escherichia coli, GI1787344, Length=288, Percent_Identity=26.0416666666667, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 74215; Mature: 74083
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.1 %Met (Mature Protein) 0.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALFGAPEPAAADDVPTLALEEAVVRAQAGERLRARRATSATLTDTPLKDVPQSVGVVTR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH AALDGFGATRLDTALDWVSGISRQNNLGGIADNFAIRGFAGDLNTGSDYLVNGFSANRAN HHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCC SVPVDTINIARIDVLKGPSAALYGRSDPGGIVNIVTRTPQFKPSREITLAAGSHDQYRLA CCCCCEEEEEEEEEECCCCEEEECCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCEEEE TELTGPLSGHFAYRLGLAAENNHGFREFSASRRYVIAPSFTWLPTDDTVVTYAFEAAQLR EECCCCCCCCEEEEEEEEECCCCCHHHHHCCCCEEEECCEEECCCCCCEEEEEEEHHHHC APFDRGIVAINRQLGALPDSRFLGEPGDGDTTVRTQSHQLSVEHQLGSGWKVDAGLSYRT CCHHCCEEEEEHHHCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCEEEECCCCEEH SRLFGKSSDASRLLDDGRTLWRQARERDYHANDLAGRVDLQGEVATGPVRHTLVAGADFY HHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCEE NFRYDPVLYRANPSASAPYAIDIFDPVYGQPRPALRPSSSTRESQRGFGAFVQDQVTLTP CEECCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCEEECCEEECC QWKLLAGVRMDRFLQHADNRLTGARVAQQQTAYSPRLGLVYQPTQTLSLYANTARSFRPN CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEECCCCEEEEEEHHHHCCCCC TGVGAQGNAFAPERGRGYEVGAKLETADGRFGGTLALYSIDKTNVLTGDSRDPVFQRTAG CCCCCCCCCCCCCCCCCEECCCEEECCCCCCCCEEEEEEECCCEEECCCCCCCHHHHHHH AVRSRGVELDVSGQLTPNLKVLGTYAYTDARVTADTVLPSGAPLSNIPRHSASALGLYEF HHHHCCEEEEECCCCCCCEEEEEEEEEECCEEEEHHCCCCCCCCCCCCCCCCCEEEEEEC GAGSLGRAGVGGGVVYVGERAGNSTDNGFKLPAYATVRLNGYVQPTRALRLSLTIDNLFD CCCCCCCCCCCCCEEEEECCCCCCCCCCEECCEEEEEEECCEECCCEEEEEEEEHHHHHH KRYYASSYNELWVAPGAERQVTLAATYTF HHHHHCCCCEEEECCCCCCEEEEEEEECC >Mature Secondary Structure ALFGAPEPAAADDVPTLALEEAVVRAQAGERLRARRATSATLTDTPLKDVPQSVGVVTR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH AALDGFGATRLDTALDWVSGISRQNNLGGIADNFAIRGFAGDLNTGSDYLVNGFSANRAN HHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCC SVPVDTINIARIDVLKGPSAALYGRSDPGGIVNIVTRTPQFKPSREITLAAGSHDQYRLA CCCCCEEEEEEEEEECCCCEEEECCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCEEEE TELTGPLSGHFAYRLGLAAENNHGFREFSASRRYVIAPSFTWLPTDDTVVTYAFEAAQLR EECCCCCCCCEEEEEEEEECCCCCHHHHHCCCCEEEECCEEECCCCCCEEEEEEEHHHHC APFDRGIVAINRQLGALPDSRFLGEPGDGDTTVRTQSHQLSVEHQLGSGWKVDAGLSYRT CCHHCCEEEEEHHHCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCEEEECCCCEEH SRLFGKSSDASRLLDDGRTLWRQARERDYHANDLAGRVDLQGEVATGPVRHTLVAGADFY HHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCEE NFRYDPVLYRANPSASAPYAIDIFDPVYGQPRPALRPSSSTRESQRGFGAFVQDQVTLTP CEECCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCEEECCEEECC QWKLLAGVRMDRFLQHADNRLTGARVAQQQTAYSPRLGLVYQPTQTLSLYANTARSFRPN CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEECCCCEEEEEEHHHHCCCCC TGVGAQGNAFAPERGRGYEVGAKLETADGRFGGTLALYSIDKTNVLTGDSRDPVFQRTAG CCCCCCCCCCCCCCCCCEECCCEEECCCCCCCCEEEEEEECCCEEECCCCCCCHHHHHHH AVRSRGVELDVSGQLTPNLKVLGTYAYTDARVTADTVLPSGAPLSNIPRHSASALGLYEF HHHHCCEEEEECCCCCCCEEEEEEEEEECCEEEEHHCCCCCCCCCCCCCCCCCEEEEEEC GAGSLGRAGVGGGVVYVGERAGNSTDNGFKLPAYATVRLNGYVQPTRALRLSLTIDNLFD CCCCCCCCCCCCCEEEEECCCCCCCCCCEECCEEEEEEECCEECCCEEEEEEEEHHHHHH KRYYASSYNELWVAPGAERQVTLAATYTF HHHHHCCCCEEEECCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3079747; 8202364; 9278503; 2823072; 7515827; 8617231; 9856937; 9865695; 10850805 [H]