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The map label for this gene is 17547374

Identifier: 17547374

GI number: 17547374

Start: 2859069

End: 2859689

Strand: Reverse

Name: 17547374

Synonym: RSc2655

Alternate gene names: NA

Gene position: 2859689-2859069 (Counterclockwise)

Preceding gene: 17547375

Following gene: 17547368

Centisome position: 76.95

GC content: 72.62

Gene sequence:

>621_bases
ATGAGCGCGCGGGCCCACGCGATCCGCACCTGGGGTGCCTGTGCGGGGGTGTTCGCGGTGGCGGCCGCGTTTTCTTTCGT
GCCGTGGCTGCATGCTGTCGGCCTGTACCAGCGCGATGCGGTCCGTGCGGGGCAGTGGTGGCGCGTGGTCACCGCCATGT
GGGTGCACCTGGATGCCTGGCACTGGCTGGCCGACGGCATGGCGGCGGCGGGGCTGATCCTGCTGCTGGCACGGGTGCTG
CGGCCGGCTGCCATCCTTGCGGTGCTGGTGGCGTGCGGCGTGCTGGTCCAGGTTGCGCTGCTCAGCCAGCCTTCGGTGCA
GTGGTACGGCGGGCTGTCCGGCGCGCTGCACGGGCTGGCGGCGTGGGGCGGCCTGTGTCTGCTGCGGCCCGCCGATGAAG
ATGCCCGCACCGATCGCCTGTCGCGCTGGATCGGCTCGCTGCTCTGCCTGGGCGTGCTGGTGAAGGTCTGGCTGGAGCAG
TCGTGGCTGTCGCCGGTTGCCTACGACCCGCACTGGGGCTTCGGCGTGGTCCGGATTGCCCATGCGCTTGGCGCGGGCAG
CGGGCTGCTGCTCTGGGTGCTGGGAGAATGGCGCGCCCAGGGGAGGCGGGCGCGCGGCTGA

Upstream 100 bases:

>100_bases
CCGCGCGCGTGCCGGCCGGGACCTGCGCGCACGAGGCGGCCCATGTGCGGGCGCTGTGGGAGCAGGTGTTCGGCAGCATC
GACGCGGCGTCGCCCACGCC

Downstream 100 bases:

>100_bases
CCGGCAGGCGGTCGGATGGGCGGGCACGCCGGTGTGCGGCGTGCCCGCCCTGCGCTCAAGCGCGCTTGCGGCGCTGGAAG
CCGAGGGCGCCAGCCGCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MSARAHAIRTWGACAGVFAVAAAFSFVPWLHAVGLYQRDAVRAGQWWRVVTAMWVHLDAWHWLADGMAAAGLILLLARVL
RPAAILAVLVACGVLVQVALLSQPSVQWYGGLSGALHGLAAWGGLCLLRPADEDARTDRLSRWIGSLLCLGVLVKVWLEQ
SWLSPVAYDPHWGFGVVRIAHALGAGSGLLLWVLGEWRAQGRRARG

Sequences:

>Translated_206_residues
MSARAHAIRTWGACAGVFAVAAAFSFVPWLHAVGLYQRDAVRAGQWWRVVTAMWVHLDAWHWLADGMAAAGLILLLARVL
RPAAILAVLVACGVLVQVALLSQPSVQWYGGLSGALHGLAAWGGLCLLRPADEDARTDRLSRWIGSLLCLGVLVKVWLEQ
SWLSPVAYDPHWGFGVVRIAHALGAGSGLLLWVLGEWRAQGRRARG
>Mature_205_residues
SARAHAIRTWGACAGVFAVAAAFSFVPWLHAVGLYQRDAVRAGQWWRVVTAMWVHLDAWHWLADGMAAAGLILLLARVLR
PAAILAVLVACGVLVQVALLSQPSVQWYGGLSGALHGLAAWGGLCLLRPADEDARTDRLSRWIGSLLCLGVLVKVWLEQS
WLSPVAYDPHWGFGVVRIAHALGAGSGLLLWVLGEWRAQGRRARG

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22297; Mature: 22166

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSARAHAIRTWGACAGVFAVAAAFSFVPWLHAVGLYQRDAVRAGQWWRVVTAMWVHLDAW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HWLADGMAAAGLILLLARVLRPAAILAVLVACGVLVQVALLSQPSVQWYGGLSGALHGLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHH
AWGGLCLLRPADEDARTDRLSRWIGSLLCLGVLVKVWLEQSWLSPVAYDPHWGFGVVRIA
HHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
HALGAGSGLLLWVLGEWRAQGRRARG
HHHCCCCCEEEHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SARAHAIRTWGACAGVFAVAAAFSFVPWLHAVGLYQRDAVRAGQWWRVVTAMWVHLDAW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HWLADGMAAAGLILLLARVLRPAAILAVLVACGVLVQVALLSQPSVQWYGGLSGALHGLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHH
AWGGLCLLRPADEDARTDRLSRWIGSLLCLGVLVKVWLEQSWLSPVAYDPHWGFGVVRIA
HHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
HALGAGSGLLLWVLGEWRAQGRRARG
HHHCCCCCEEEHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA