Click here to switch to the map view.

The map label for this gene is 17547334

Identifier: 17547334

GI number: 17547334

Start: 2816196

End: 2816681

Strand: Reverse

Name: 17547334

Synonym: RSc2615

Alternate gene names: NA

Gene position: 2816681-2816196 (Counterclockwise)

Preceding gene: 17547335

Following gene: 17547333

Centisome position: 75.79

GC content: 53.7

Gene sequence:

>486_bases
ATGGGGACATATCGGGTCGCACAGGTTTGTCCTAACGGACATGTCGCAACAACAGCCGCTGATCAGAATCCCGAGCTTCG
AGAGGCGTTCTGCTCTAAGTGCGGTGAAGAGACCATCATGCAGTGTCCTTCGTGCAGCGCATCCATTCGCGGCGATTTCT
ACGTTGAAGGCGTTTTCGGCTTGGGTGGTGATTACGAGCCTCCCTCGTTCTGCCACAACTGCGGTAGCCGATTCCCTTGG
ACTGAACGCAAGATTGCTGGCGCTGTTGAGCTAGTGGAAGCAGGCGCAGAGCTGTCGCCAGAAGAAGTCCAGCAGTTCCG
TACCGATTTGACGGAATTGACCAAAGACAGTCCAAAAACTCAAGTTGCATCCCTTCGATTCAAGAAGGTGATGACGAAGG
TCGGCGCTTCGGTTGCATCTGGCGTGCGCGACATTGTTGTCGATGTACTTAGCGAAGCTGCGAAAAAAGCGATTTGGGGA
GCTTAG

Upstream 100 bases:

>100_bases
CGCCCGGTGTCATCCACGCCTCCAATTTCCACGCTGCTGCTTTAGAATCCATTGATTTGACCAACGCCGTATCTATCGGC
ATAGATAACAAGGGAGCGTA

Downstream 100 bases:

>100_bases
AAGGAATGGCAATGACTCTCGACGAAATTAAGGCCTGCCTACAGGCCGGCAATCTTCAGATTGCGAATGAGACGGCACTT
GCAAACGGCACTGGCACACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MGTYRVAQVCPNGHVATTAADQNPELREAFCSKCGEETIMQCPSCSASIRGDFYVEGVFGLGGDYEPPSFCHNCGSRFPW
TERKIAGAVELVEAGAELSPEEVQQFRTDLTELTKDSPKTQVASLRFKKVMTKVGASVASGVRDIVVDVLSEAAKKAIWG
A

Sequences:

>Translated_161_residues
MGTYRVAQVCPNGHVATTAADQNPELREAFCSKCGEETIMQCPSCSASIRGDFYVEGVFGLGGDYEPPSFCHNCGSRFPW
TERKIAGAVELVEAGAELSPEEVQQFRTDLTELTKDSPKTQVASLRFKKVMTKVGASVASGVRDIVVDVLSEAAKKAIWG
A
>Mature_160_residues
GTYRVAQVCPNGHVATTAADQNPELREAFCSKCGEETIMQCPSCSASIRGDFYVEGVFGLGGDYEPPSFCHNCGSRFPWT
ERKIAGAVELVEAGAELSPEEVQQFRTDLTELTKDSPKTQVASLRFKKVMTKVGASVASGVRDIVVDVLSEAAKKAIWGA

Specific function: Unknown

COG id: COG4306

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17325; Mature: 17194

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTYRVAQVCPNGHVATTAADQNPELREAFCSKCGEETIMQCPSCSASIRGDFYVEGVFG
CCCCHHHHCCCCCCEEECCCCCCCHHHHHHHHHHCHHHHHHCCCCCCCCCCCEEEEEEEC
LGGDYEPPSFCHNCGSRFPWTERKIAGAVELVEAGAELSPEEVQQFRTDLTELTKDSPKT
CCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHH
QVASLRFKKVMTKVGASVASGVRDIVVDVLSEAAKKAIWGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GTYRVAQVCPNGHVATTAADQNPELREAFCSKCGEETIMQCPSCSASIRGDFYVEGVFG
CCCHHHHCCCCCCEEECCCCCCCHHHHHHHHHHCHHHHHHCCCCCCCCCCCEEEEEEEC
LGGDYEPPSFCHNCGSRFPWTERKIAGAVELVEAGAELSPEEVQQFRTDLTELTKDSPKT
CCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHH
QVASLRFKKVMTKVGASVASGVRDIVVDVLSEAAKKAIWGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA