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The map label for this gene is trbE [H]

Identifier: 17547300

GI number: 17547300

Start: 2787371

End: 2789821

Strand: Reverse

Name: trbE [H]

Synonym: RSc2581

Alternate gene names: 17547300

Gene position: 2789821-2787371 (Counterclockwise)

Preceding gene: 17547301

Following gene: 17547299

Centisome position: 75.07

GC content: 66.34

Gene sequence:

>2451_bases
ATGCTGAACCTTGCCGAATACCGCCAGCGGCCCGCCTTGCTGGCCGACTGGCTTCCTTGGGCCGGGCTGATCGCACCGGG
TGTCGTCTTGAACAAGGACGGCAGTTTCCAGCGCACAGCCCGTTTCCGTGGTCCCGATCTCGATAGCGCCACGCAAGGCG
AGTTGATCGCCACCACGGCGCGGCTGAACAACGCGCTGCGCCGGCTGGGTTCGGGCTGGGCGCTGTTCATCGAGGCCGAG
CGCCGACCGGCCGCAGACTACCCGTATTCCGACTTCCCCGAACCACTGTCCTGGCTCGTGGACGAGGAACGCCGCGCCGC
CTTCGAGGAATCGGGCAACCACTTCGAGAGCACCTATCACCTGACGCTGGCCTACCTGCCGCCGGAGGAATCCCGCGCCC
GTGCGGCCAAGCTGCTGTACGAGCACGCGCCGGGCGATGGCGTGGACTGGCGCGGTCGGCTCGATGCCTTCGTGGCGGAA
ACCGATCGCGTCTTTGACCTGCTCGATGGCGTGATGCCGGAAATCGCCTGGCTGGACGATGCTGCGACGCTGACCTATCT
GCACGCGACCATCTCGACGCGGCGCTACCGCGTGGGCGTGCCGGAAGTGCCGTTTCACCTCGACGCGCTGCTGGCCGATT
CCGCCCTGGTCGGCGGCCTCGCGCCCATGCTGGGCGACCAGCACCTGCGCGTGGTGTCGGTGCGGGGCTTCCCGACATCG
ACCTGGCCGGGCCTGCTGGACGACCTCAACCGCCTGGGCTTTGCCTATCGCTGGTCAACCCGGTTCCTCTGCCTCGACAA
AGCGGAGGCGGAAAAGGAGCTGGGCCGCCTGCGCCGCCAATGGTTTGCCAAGCGCAAGAATGTCATCGCGCTGCTGCGCG
AAACGATCTTTCAGCAGGAATCGCCCTTGGTGGACACGGATGCCAGCAACAAGGCGGCCGACGCCGACGCTGCGTTGCAG
GAGCTGGGCAGCGATCAAGTGGCCTTCGGCTACCTCACCGCCACGGTGACGGTACTTGATGCTGATCCAGCCGTGGCCGA
CGAAAAGCTGCGCATGGTGGAGCGCGTGATTCAGGGCCGCGGCTTTGTAACCATCCCCGAAACGCTCAATGCCGTGGATG
CGTGGCTGTCGTCCATCCCTGGCAACGCCTATGCCAATGTGCGCCAGCCCATCGTCTCGACGTTGAACCTGGCGCACATG
ATGCCGCTGTCGGCGGTGTGGGCCGGCCCGGAGCGCAACAAGCACTTGGACGGCCCGCCGGTGATTGTCACGCGCACTGA
CGGCGCAACGCCGTTTCGCTTGGTCACGCACATCGGCGACGTGGGCCACATGGCCGTGGTCGGCCCGACCGGCATGGGCA
AGTCGGCCTTCCTGGCCGTGCTAGCGATGCAATTCCGGCGCTATCTGCACTCGCGCATCTTCGTCTTCGACATGGGCCGC
TCCATGCGCGCCACCATCCTGGGCCTGGGAGGCGAGCACTACGACCTCGGCGCGGATGGCGGCATTGCCTTTCAGCCACT
CGCGCACATCGACGCAGAGGGCTACCGCACCTGGGCCGCCGAATGGGTGGAAGGCCGGCTGCTGCACGAAGGCGTCACCG
TCGGCCCGGACGAGAAGGCCGGCATCTGGTCGGCGCTCGGCAGTCTGGCCGGTGCGCCCGTGGAGCAGCGCACGATGACC
GGGCTTTCGGTGCTGCTGCAATCGAACGCGCTGCGCCAGGCACTCGCGCCCTATGTGCTCGGCGGCGCACACGGCAAGCT
GCTGGATGCAGACCGCGACCGGCTCGGCAGCGCGGACGTTCAGTGCTTCGAGATGGAGGAACTGATGGCCAGCCCCGCCG
CCGTGCGGTCGGTGCTGGGCTACCTGTTTGCCCGCTTCGATGAACGATTCGACGGTTCGCCCACGCTGCTGATCCTCGAT
GAATCCTGGCTGTTCCTGGATGACCCGGTATTTGCCGCACGCATCCGCCAGTGGTTGAAGACGCTGCGCAAGCGCAATGT
CAGTGTCGTCTTCGCTACGCAAAGCCTGGCGGATATTCAGAACTCCAGCATCGCGGCGGCCATCATCGAAAGCTGCGCGG
TTCGGATTTTCTTGCCCAACCCGCAGGCGACCGAACCGCAGATTCGCACGATCTACGAGGGCTTCGGCCTCAACAGCCGG
CAAATCGAGATCGTCGCCACCGCGCAACCCAAGCAGGACTACTACTACCAATCGCGCCTCGGCAATCGCCTGTTCGACCT
CGACCTGGGGCCGGTCGTGCTCGCCTTCGCAGGCGCATCCACACCGCAAGACCAACGCGACATAGAGCGCGTGCTGACGC
AGGCCGGCGCTCCCGGCTTCGCCGGCGCGTGGCTGCGCCATCGCGGCCTCGATTGGGCCGCCGACCTGCTGCCGTCCTCG
CCGGCGGCAGCTTCTGTCCTTGCTACTCAACCGCTGGAGGTTTCGCCATGA

Upstream 100 bases:

>100_bases
GATGGCCGTGTGGGGCGCGCGTGTTGATCCGCAGTTCATGCAGGTCTTCGCCCGGCACATCAAGCACAAGTCGCTGCTGG
ACGTATAGGGGAACGCCGCC

Downstream 100 bases:

>100_bases
AGACCCGTGTGCTTTCCGTTTCGCTCGCCGCCGTGCTGTCGGTGTCGCTGCTGGCCGTGCAGCCCGCATCGGCGCTGACG
GTGTTCGACCCGTCCAACTT

Product: conjugal transfer ATPase TrbE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 816; Mature: 816

Protein sequence:

>816_residues
MLNLAEYRQRPALLADWLPWAGLIAPGVVLNKDGSFQRTARFRGPDLDSATQGELIATTARLNNALRRLGSGWALFIEAE
RRPAADYPYSDFPEPLSWLVDEERRAAFEESGNHFESTYHLTLAYLPPEESRARAAKLLYEHAPGDGVDWRGRLDAFVAE
TDRVFDLLDGVMPEIAWLDDAATLTYLHATISTRRYRVGVPEVPFHLDALLADSALVGGLAPMLGDQHLRVVSVRGFPTS
TWPGLLDDLNRLGFAYRWSTRFLCLDKAEAEKELGRLRRQWFAKRKNVIALLRETIFQQESPLVDTDASNKAADADAALQ
ELGSDQVAFGYLTATVTVLDADPAVADEKLRMVERVIQGRGFVTIPETLNAVDAWLSSIPGNAYANVRQPIVSTLNLAHM
MPLSAVWAGPERNKHLDGPPVIVTRTDGATPFRLVTHIGDVGHMAVVGPTGMGKSAFLAVLAMQFRRYLHSRIFVFDMGR
SMRATILGLGGEHYDLGADGGIAFQPLAHIDAEGYRTWAAEWVEGRLLHEGVTVGPDEKAGIWSALGSLAGAPVEQRTMT
GLSVLLQSNALRQALAPYVLGGAHGKLLDADRDRLGSADVQCFEMEELMASPAAVRSVLGYLFARFDERFDGSPTLLILD
ESWLFLDDPVFAARIRQWLKTLRKRNVSVVFATQSLADIQNSSIAAAIIESCAVRIFLPNPQATEPQIRTIYEGFGLNSR
QIEIVATAQPKQDYYYQSRLGNRLFDLDLGPVVLAFAGASTPQDQRDIERVLTQAGAPGFAGAWLRHRGLDWAADLLPSS
PAAASVLATQPLEVSP

Sequences:

>Translated_816_residues
MLNLAEYRQRPALLADWLPWAGLIAPGVVLNKDGSFQRTARFRGPDLDSATQGELIATTARLNNALRRLGSGWALFIEAE
RRPAADYPYSDFPEPLSWLVDEERRAAFEESGNHFESTYHLTLAYLPPEESRARAAKLLYEHAPGDGVDWRGRLDAFVAE
TDRVFDLLDGVMPEIAWLDDAATLTYLHATISTRRYRVGVPEVPFHLDALLADSALVGGLAPMLGDQHLRVVSVRGFPTS
TWPGLLDDLNRLGFAYRWSTRFLCLDKAEAEKELGRLRRQWFAKRKNVIALLRETIFQQESPLVDTDASNKAADADAALQ
ELGSDQVAFGYLTATVTVLDADPAVADEKLRMVERVIQGRGFVTIPETLNAVDAWLSSIPGNAYANVRQPIVSTLNLAHM
MPLSAVWAGPERNKHLDGPPVIVTRTDGATPFRLVTHIGDVGHMAVVGPTGMGKSAFLAVLAMQFRRYLHSRIFVFDMGR
SMRATILGLGGEHYDLGADGGIAFQPLAHIDAEGYRTWAAEWVEGRLLHEGVTVGPDEKAGIWSALGSLAGAPVEQRTMT
GLSVLLQSNALRQALAPYVLGGAHGKLLDADRDRLGSADVQCFEMEELMASPAAVRSVLGYLFARFDERFDGSPTLLILD
ESWLFLDDPVFAARIRQWLKTLRKRNVSVVFATQSLADIQNSSIAAAIIESCAVRIFLPNPQATEPQIRTIYEGFGLNSR
QIEIVATAQPKQDYYYQSRLGNRLFDLDLGPVVLAFAGASTPQDQRDIERVLTQAGAPGFAGAWLRHRGLDWAADLLPSS
PAAASVLATQPLEVSP
>Mature_816_residues
MLNLAEYRQRPALLADWLPWAGLIAPGVVLNKDGSFQRTARFRGPDLDSATQGELIATTARLNNALRRLGSGWALFIEAE
RRPAADYPYSDFPEPLSWLVDEERRAAFEESGNHFESTYHLTLAYLPPEESRARAAKLLYEHAPGDGVDWRGRLDAFVAE
TDRVFDLLDGVMPEIAWLDDAATLTYLHATISTRRYRVGVPEVPFHLDALLADSALVGGLAPMLGDQHLRVVSVRGFPTS
TWPGLLDDLNRLGFAYRWSTRFLCLDKAEAEKELGRLRRQWFAKRKNVIALLRETIFQQESPLVDTDASNKAADADAALQ
ELGSDQVAFGYLTATVTVLDADPAVADEKLRMVERVIQGRGFVTIPETLNAVDAWLSSIPGNAYANVRQPIVSTLNLAHM
MPLSAVWAGPERNKHLDGPPVIVTRTDGATPFRLVTHIGDVGHMAVVGPTGMGKSAFLAVLAMQFRRYLHSRIFVFDMGR
SMRATILGLGGEHYDLGADGGIAFQPLAHIDAEGYRTWAAEWVEGRLLHEGVTVGPDEKAGIWSALGSLAGAPVEQRTMT
GLSVLLQSNALRQALAPYVLGGAHGKLLDADRDRLGSADVQCFEMEELMASPAAVRSVLGYLFARFDERFDGSPTLLILD
ESWLFLDDPVFAARIRQWLKTLRKRNVSVVFATQSLADIQNSSIAAAIIESCAVRIFLPNPQATEPQIRTIYEGFGLNSR
QIEIVATAQPKQDYYYQSRLGNRLFDLDLGPVVLAFAGASTPQDQRDIERVLTQAGAPGFAGAWLRHRGLDWAADLLPSS
PAAASVLATQPLEVSP

Specific function: Unknown

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbE/virB4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004346
- InterPro:   IPR018145 [H]

Pfam domain/function: PF03135 CagE_TrbE_VirB [H]

EC number: NA

Molecular weight: Translated: 89627; Mature: 89627

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLAEYRQRPALLADWLPWAGLIAPGVVLNKDGSFQRTARFRGPDLDSATQGELIATTA
CCCHHHHHCCCCHHHHHCCHHHHHCCCEEECCCCCCHHHHHCCCCCCCCCCCCCEEEHHH
RLNNALRRLGSGWALFIEAERRPAADYPYSDFPEPLSWLVDEERRAAFEESGNHFESTYH
HHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHCCCCCCEEEE
LTLAYLPPEESRARAAKLLYEHAPGDGVDWRGRLDAFVAETDRVFDLLDGVMPEIAWLDD
EEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AATLTYLHATISTRRYRVGVPEVPFHLDALLADSALVGGLAPMLGDQHLRVVSVRGFPTS
CHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
TWPGLLDDLNRLGFAYRWSTRFLCLDKAEAEKELGRLRRQWFAKRKNVIALLRETIFQQE
CCCHHHHHHHHCCEEEEECCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SPLVDTDASNKAADADAALQELGSDQVAFGYLTATVTVLDADPAVADEKLRMVERVIQGR
CCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHCC
GFVTIPETLNAVDAWLSSIPGNAYANVRQPIVSTLNLAHMMPLSAVWAGPERNKHLDGPP
CCEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCC
VIVTRTDGATPFRLVTHIGDVGHMAVVGPTGMGKSAFLAVLAMQFRRYLHSRIFVFDMGR
EEEEECCCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCEEEEEECCC
SMRATILGLGGEHYDLGADGGIAFQPLAHIDAEGYRTWAAEWVEGRLLHEGVTVGPDEKA
CCEEEEEECCCCEEECCCCCCEEECHHHHCCCCHHHHHHHHHHHCCHHHCCCCCCCCCCH
GIWSALGSLAGAPVEQRTMTGLSVLLQSNALRQALAPYVLGGAHGKLLDADRDRLGSADV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCC
QCFEMEELMASPAAVRSVLGYLFARFDERFDGSPTLLILDESWLFLDDPVFAARIRQWLK
EEEEHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCHHHHHHHHHHH
TLRKRNVSVVFATQSLADIQNSSIAAAIIESCAVRIFLPNPQATEPQIRTIYEGFGLNSR
HHHHCCCEEEEEEHHHHHHCCCHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHCCCCCC
QIEIVATAQPKQDYYYQSRLGNRLFDLDLGPVVLAFAGASTPQDQRDIERVLTQAGAPGF
EEEEEEECCCCHHHHHHHHHCCEEEECCCCHHHHEECCCCCCCHHHHHHHHHHHCCCCCC
AGAWLRHRGLDWAADLLPSSPAAASVLATQPLEVSP
HHHHHHHCCCCHHHHHCCCCCCHHHHHCCCCCCCCC
>Mature Secondary Structure
MLNLAEYRQRPALLADWLPWAGLIAPGVVLNKDGSFQRTARFRGPDLDSATQGELIATTA
CCCHHHHHCCCCHHHHHCCHHHHHCCCEEECCCCCCHHHHHCCCCCCCCCCCCCEEEHHH
RLNNALRRLGSGWALFIEAERRPAADYPYSDFPEPLSWLVDEERRAAFEESGNHFESTYH
HHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHCCCCCCEEEE
LTLAYLPPEESRARAAKLLYEHAPGDGVDWRGRLDAFVAETDRVFDLLDGVMPEIAWLDD
EEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AATLTYLHATISTRRYRVGVPEVPFHLDALLADSALVGGLAPMLGDQHLRVVSVRGFPTS
CHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
TWPGLLDDLNRLGFAYRWSTRFLCLDKAEAEKELGRLRRQWFAKRKNVIALLRETIFQQE
CCCHHHHHHHHCCEEEEECCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SPLVDTDASNKAADADAALQELGSDQVAFGYLTATVTVLDADPAVADEKLRMVERVIQGR
CCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHCC
GFVTIPETLNAVDAWLSSIPGNAYANVRQPIVSTLNLAHMMPLSAVWAGPERNKHLDGPP
CCEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCC
VIVTRTDGATPFRLVTHIGDVGHMAVVGPTGMGKSAFLAVLAMQFRRYLHSRIFVFDMGR
EEEEECCCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCEEEEEECCC
SMRATILGLGGEHYDLGADGGIAFQPLAHIDAEGYRTWAAEWVEGRLLHEGVTVGPDEKA
CCEEEEEECCCCEEECCCCCCEEECHHHHCCCCHHHHHHHHHHHCCHHHCCCCCCCCCCH
GIWSALGSLAGAPVEQRTMTGLSVLLQSNALRQALAPYVLGGAHGKLLDADRDRLGSADV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCC
QCFEMEELMASPAAVRSVLGYLFARFDERFDGSPTLLILDESWLFLDDPVFAARIRQWLK
EEEEHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCHHHHHHHHHHH
TLRKRNVSVVFATQSLADIQNSSIAAAIIESCAVRIFLPNPQATEPQIRTIYEGFGLNSR
HHHHCCCEEEEEEHHHHHHCCCHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHCCCCCC
QIEIVATAQPKQDYYYQSRLGNRLFDLDLGPVVLAFAGASTPQDQRDIERVLTQAGAPGF
EEEEEEECCCCHHHHHHHHHCCEEEECCCCHHHHEECCCCCCCHHHHHHHHHHHCCCCCC
AGAWLRHRGLDWAADLLPSSPAAASVLATQPLEVSP
HHHHHHHCCCCHHHHHCCCCCCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]