Click here to switch to the map view.

The map label for this gene is 17547293

Identifier: 17547293

GI number: 17547293

Start: 2781673

End: 2781915

Strand: Reverse

Name: 17547293

Synonym: RSc2574

Alternate gene names: NA

Gene position: 2781915-2781673 (Counterclockwise)

Preceding gene: 17547294

Following gene: 17547278

Centisome position: 74.85

GC content: 65.02

Gene sequence:

>243_bases
ATGACGACGCGCAAGCTGCGGCTCGGGCCGCTGCCGAAAACCGAATCCACGAAGCTGACCTTTGCCTGCCCGGCCAGCTT
GAAAGCCGACCTCGACCGCTACGCCGCGCTGCATGCGCAGACGTATGGCGAGGCGGTCGATGTGGCGACGCTGATCCCGC
ACATGCTGGAAGCCTTCATGGCGGGGGATCGTGGATTCAGGAAGGGAACTTCGGGCAAGGCTGCGCCGCCGAAGCCAAGC
TGA

Upstream 100 bases:

>100_bases
CGCTGACCGAACGGCCGGGCCTGCCGGTTCGCATCATCGTCAACCGCGATCTGGTGCTGCGGCCCTACCAGCCGCTTTTC
TTCAACAGGGGGACTTCACG

Downstream 100 bases:

>100_bases
TGATGCCGGTTTCCGCTGGCGGCCATCCCCCGAACGCGCAGCCCAAGGCTGCGCGTTCTTCGTTCTGGAGGACGGCGACC
GATTGGGCGTATGATGACCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 80; Mature: 79

Protein sequence:

>80_residues
MTTRKLRLGPLPKTESTKLTFACPASLKADLDRYAALHAQTYGEAVDVATLIPHMLEAFMAGDRGFRKGTSGKAAPPKPS

Sequences:

>Translated_80_residues
MTTRKLRLGPLPKTESTKLTFACPASLKADLDRYAALHAQTYGEAVDVATLIPHMLEAFMAGDRGFRKGTSGKAAPPKPS
>Mature_79_residues
TTRKLRLGPLPKTESTKLTFACPASLKADLDRYAALHAQTYGEAVDVATLIPHMLEAFMAGDRGFRKGTSGKAAPPKPS

Specific function: Unknown

COG id: COG5639

COG function: function code S; Uncharacterized conserved small protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8573; Mature: 8442

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRKLRLGPLPKTESTKLTFACPASLKADLDRYAALHAQTYGEAVDVATLIPHMLEAFM
CCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
AGDRGFRKGTSGKAAPPKPS
HCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTRKLRLGPLPKTESTKLTFACPASLKADLDRYAALHAQTYGEAVDVATLIPHMLEAFM
CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
AGDRGFRKGTSGKAAPPKPS
HCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA