| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is mutL
Identifier: 17547282
GI number: 17547282
Start: 2772063
End: 2773973
Strand: Direct
Name: mutL
Synonym: RSc2563
Alternate gene names: 17547282
Gene position: 2772063-2773973 (Clockwise)
Preceding gene: 17547281
Following gene: 17547283
Centisome position: 74.59
GC content: 71.17
Gene sequence:
>1911_bases ATGACTGCCGCCACCCCTGCCCGCCGCCCCATCCGTCCGCTTCCCGACCAGCTGATCAGCCAGATCGCGGCCGGCGAGGT GGTCGAACGCCCGGCCTCCGTGGTCAAGGAACTGCTCGAGAACGCACTCGACGCCGGCGCCACTCAGCTGCAGATCAAGC TGGAAGAAGGCGGCGTGCGGCGCATCGCCATCACCGACAACGGCGGAGGCATTCCGGTCGACGAACTGCCGGTCGCGCTG ATGCGGCACGCGACCAGCAAGATCGGCTCGCTGGAGGAGCTGGAATCGGTGGCGACGCTGGGGTTCCGCGGCGAGGCGCT GGCATCGATCGCCTCGGTGGCGGAGTTGACGCTCACCTCGCGCACCGCGCAAGACGCGCACGCCACGCAAATCATCGCGC AAACGGGGCGCGTGCAGCCGGCCTCGGGCGGCGTCGGCACCACGGTCGACGTGCAGCACCTGTACTTCAACACGCCGGCG CGCCGCAAATTCCTCAAGACCGAACAGACCGAACTGGGCCACTGCCTGGAGGTGATCCGCCGCACCGCACTGGCGCGCCC GGACGTGGCCATCTCCGTGCATCACAACGGCAAGCCGCTGGAGCACTGGAACGCCGCCCAGGCCGACATGCGCACCGCCG CCGTGCTGGGCACCGAGTTCGCCCGCGCCCGCCTGCCGTTCGAAGAGGCGGCCGGCGAGCTGCGCCTGTTCGGCTTTGCC GGCCTGCCGACGGCCTCGCGCGGCCGGGCCGACCACCAGTTTTTCTACGTCAACGGTCGCTTCGTGCGCGACCGCCTGTT GACCCACGCCGTGCGCAGCGCCTATGAAGACGTACTGCACGGCGACCGCTTCCCCGCCTACGTGCTGTGCCTGGAGCTGC CGCCCGAGGCGGTGGACGTGAACGTGCATCCGTCCAAGATCGAGGTGCGCTTCCGCGACAGCCGCGCAGTGCACCAGTTC GTCTACCACGCGGTGCAGCGCGCGCTGTCGCGCCACGCCGGCGAACAGGGCGACAGCCTGCGCACCGACATCGCCGACGC GCCCGAGCAGCCCGGCGCCACGGCCACGCCCGCCGACAACACCACGCGCTGGGTCAACCAGATGGCCGCGCGGCAGACCT CGCTCGGCATCGCCCAGCCGCGCGCGGAATACCTGGCGATGATGCGCGGCGGCAGCGCGCCGCAGCCGTCGAGCCGCCCG GCATGGATGGCCGACGTGCCGAGCGCCGCCACCCTGTTCGATGGCGCGGCCTCCGCACCCGCCGACGCGGCCCCGGCTCA GGCATCCGAGCCGGCAGCGGCGCCGCAAGCCGATGACAGCGACGACGCGCACCCGCTCGGCTTCGCCGTCGCCCAGCTGC ACGGCATCTACGTGCTGGCGCAGAACGCGCGCGGCATGGTGCTGGTCGACATGCACGCCGCGCACGAGCGCATCCTGTAC GAACAGCTGAAAACGGCGCTGGAAGCCAGGCGCATCGAAGTGCAGCCGCTGCTGATCCCGGTCACCTTTGCGGCCAGTCC GGTGGAGATCGGCACGGCGGAGGAATTCGGCGACACGCTGGACCTGCTCGGCTTCGACATCAGCGCCGTCTCGCCGACCA CGCTGGCGGTGCGCGCCGTGCCCACGCTGCTGCAGAAGGCCGATGCCCAGGCGCTCGCCCGCGACGTGCTGCGCGACCTG CAAGCCTACGGCGGCTCGCGCGTGCTGGCCGAGCGCCAGAACGAGCTGCTCGCCACGCTGGCCTGCCATTCCGCCGTGCG CGCCAACCGCCGGCTGAACCTGGACGAAATGAACGCCCTGCTGCGCCAGATGGAAGCCACCGAACGCGCCGACCAGTGCA ACCACGGCCGGCCGACGTGGATCCAGCTGACGGTCGCCGATCTGGACCGGCTGTTCCTGCGCGGCCAGTGA
Upstream 100 bases:
>100_bases GGGCCCGGCCGTCGACACGCGGACCGCGCAGTCGCCATGACGGGCCAGGGCGGGCACCGGTGCCCTGCGCCGCACCGGGG GCGGCCTTTATAATGCCGCG
Downstream 100 bases:
>100_bases CCGCACGATGACCGCCGCCCCGCACACCGCCCCGCGCGCCGTCTGCCTGCTCGGCCCGACCGCCTCCGGCAAGACCGCCG CCGCGCTCGCGCTCGCCGAG
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 636; Mature: 635
Protein sequence:
>636_residues MTAATPARRPIRPLPDQLISQIAAGEVVERPASVVKELLENALDAGATQLQIKLEEGGVRRIAITDNGGGIPVDELPVAL MRHATSKIGSLEELESVATLGFRGEALASIASVAELTLTSRTAQDAHATQIIAQTGRVQPASGGVGTTVDVQHLYFNTPA RRKFLKTEQTELGHCLEVIRRTALARPDVAISVHHNGKPLEHWNAAQADMRTAAVLGTEFARARLPFEEAAGELRLFGFA GLPTASRGRADHQFFYVNGRFVRDRLLTHAVRSAYEDVLHGDRFPAYVLCLELPPEAVDVNVHPSKIEVRFRDSRAVHQF VYHAVQRALSRHAGEQGDSLRTDIADAPEQPGATATPADNTTRWVNQMAARQTSLGIAQPRAEYLAMMRGGSAPQPSSRP AWMADVPSAATLFDGAASAPADAAPAQASEPAAAPQADDSDDAHPLGFAVAQLHGIYVLAQNARGMVLVDMHAAHERILY EQLKTALEARRIEVQPLLIPVTFAASPVEIGTAEEFGDTLDLLGFDISAVSPTTLAVRAVPTLLQKADAQALARDVLRDL QAYGGSRVLAERQNELLATLACHSAVRANRRLNLDEMNALLRQMEATERADQCNHGRPTWIQLTVADLDRLFLRGQ
Sequences:
>Translated_636_residues MTAATPARRPIRPLPDQLISQIAAGEVVERPASVVKELLENALDAGATQLQIKLEEGGVRRIAITDNGGGIPVDELPVAL MRHATSKIGSLEELESVATLGFRGEALASIASVAELTLTSRTAQDAHATQIIAQTGRVQPASGGVGTTVDVQHLYFNTPA RRKFLKTEQTELGHCLEVIRRTALARPDVAISVHHNGKPLEHWNAAQADMRTAAVLGTEFARARLPFEEAAGELRLFGFA GLPTASRGRADHQFFYVNGRFVRDRLLTHAVRSAYEDVLHGDRFPAYVLCLELPPEAVDVNVHPSKIEVRFRDSRAVHQF VYHAVQRALSRHAGEQGDSLRTDIADAPEQPGATATPADNTTRWVNQMAARQTSLGIAQPRAEYLAMMRGGSAPQPSSRP AWMADVPSAATLFDGAASAPADAAPAQASEPAAAPQADDSDDAHPLGFAVAQLHGIYVLAQNARGMVLVDMHAAHERILY EQLKTALEARRIEVQPLLIPVTFAASPVEIGTAEEFGDTLDLLGFDISAVSPTTLAVRAVPTLLQKADAQALARDVLRDL QAYGGSRVLAERQNELLATLACHSAVRANRRLNLDEMNALLRQMEATERADQCNHGRPTWIQLTVADLDRLFLRGQ >Mature_635_residues TAATPARRPIRPLPDQLISQIAAGEVVERPASVVKELLENALDAGATQLQIKLEEGGVRRIAITDNGGGIPVDELPVALM RHATSKIGSLEELESVATLGFRGEALASIASVAELTLTSRTAQDAHATQIIAQTGRVQPASGGVGTTVDVQHLYFNTPAR RKFLKTEQTELGHCLEVIRRTALARPDVAISVHHNGKPLEHWNAAQADMRTAAVLGTEFARARLPFEEAAGELRLFGFAG LPTASRGRADHQFFYVNGRFVRDRLLTHAVRSAYEDVLHGDRFPAYVLCLELPPEAVDVNVHPSKIEVRFRDSRAVHQFV YHAVQRALSRHAGEQGDSLRTDIADAPEQPGATATPADNTTRWVNQMAARQTSLGIAQPRAEYLAMMRGGSAPQPSSRPA WMADVPSAATLFDGAASAPADAAPAQASEPAAAPQADDSDDAHPLGFAVAQLHGIYVLAQNARGMVLVDMHAAHERILYE QLKTALEARRIEVQPLLIPVTFAASPVEIGTAEEFGDTLDLLGFDISAVSPTTLAVRAVPTLLQKADAQALARDVLRDLQ AYGGSRVLAERQNELLATLACHSAVRANRRLNLDEMNALLRQMEATERADQCNHGRPTWIQLTVADLDRLFLRGQ
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family
Homologues:
Organism=Homo sapiens, GI4557757, Length=335, Percent_Identity=34.3283582089552, Blast_Score=195, Evalue=1e-49, Organism=Homo sapiens, GI4505911, Length=330, Percent_Identity=31.8181818181818, Blast_Score=169, Evalue=9e-42, Organism=Homo sapiens, GI189458898, Length=330, Percent_Identity=31.8181818181818, Blast_Score=168, Evalue=2e-41, Organism=Homo sapiens, GI189458896, Length=314, Percent_Identity=31.8471337579618, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI4505913, Length=349, Percent_Identity=28.6532951289398, Blast_Score=133, Evalue=6e-31, Organism=Homo sapiens, GI310128478, Length=349, Percent_Identity=28.6532951289398, Blast_Score=132, Evalue=7e-31, Organism=Homo sapiens, GI263191589, Length=241, Percent_Identity=29.045643153527, Blast_Score=99, Evalue=9e-21, Organism=Homo sapiens, GI310128480, Length=297, Percent_Identity=26.5993265993266, Blast_Score=91, Evalue=5e-18, Organism=Homo sapiens, GI91992160, Length=262, Percent_Identity=24.4274809160305, Blast_Score=76, Evalue=8e-14, Organism=Homo sapiens, GI91992162, Length=262, Percent_Identity=24.4274809160305, Blast_Score=76, Evalue=8e-14, Organism=Escherichia coli, GI1790612, Length=565, Percent_Identity=42.8318584070797, Blast_Score=354, Evalue=8e-99, Organism=Caenorhabditis elegans, GI71991825, Length=321, Percent_Identity=33.3333333333333, Blast_Score=164, Evalue=1e-40, Organism=Caenorhabditis elegans, GI17562796, Length=380, Percent_Identity=25, Blast_Score=130, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6323819, Length=318, Percent_Identity=33.9622641509434, Blast_Score=183, Evalue=9e-47, Organism=Saccharomyces cerevisiae, GI6324247, Length=470, Percent_Identity=26.3829787234043, Blast_Score=142, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6323063, Length=146, Percent_Identity=29.4520547945205, Blast_Score=77, Evalue=7e-15, Organism=Drosophila melanogaster, GI17136968, Length=310, Percent_Identity=34.5161290322581, Blast_Score=181, Evalue=2e-45, Organism=Drosophila melanogaster, GI17136970, Length=356, Percent_Identity=26.123595505618, Blast_Score=109, Evalue=5e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MUTL_RALSO (Q8XWB1)
Other databases:
- EMBL: AL646052 - RefSeq: NP_520684.1 - ProteinModelPortal: Q8XWB1 - SMR: Q8XWB1 - GeneID: 1221410 - GenomeReviews: AL646052_GR - KEGG: rso:RSc2563 - NMPDR: fig|267608.1.peg.2563 - HOGENOM: HBG520262 - OMA: FLFINNR - ProtClustDB: PRK00095 - BioCyc: RSOL267608:RSC2563-MONOMER - HAMAP: MF_00149 - InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 - Gene3D: G3DSA:3.30.565.10 - Gene3D: G3DSA:3.30.230.10 - PANTHER: PTHR10073 - SMART: SM00387 - SMART: SM00853 - TIGRFAMs: TIGR00585
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C; SSF55874 ATP_bd_ATPase; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 68733; Mature: 68601
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAATPARRPIRPLPDQLISQIAAGEVVERPASVVKELLENALDAGATQLQIKLEEGGVR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEE RIAITDNGGGIPVDELPVALMRHATSKIGSLEELESVATLGFRGEALASIASVAELTLTS EEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RTAQDAHATQIIAQTGRVQPASGGVGTTVDVQHLYFNTPARRKFLKTEQTELGHCLEVIR CCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHEEECCHHHHHHHHHHHHHHHHHHHHHH RTALARPDVAISVHHNGKPLEHWNAAQADMRTAAVLGTEFARARLPFEEAAGELRLFGFA HHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEEE GLPTASRGRADHQFFYVNGRFVRDRLLTHAVRSAYEDVLHGDRFPAYVLCLELPPEAVDV CCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEE NVHPSKIEVRFRDSRAVHQFVYHAVQRALSRHAGEQGDSLRTDIADAPEQPGATATPADN EECCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCC TTRWVNQMAARQTSLGIAQPRAEYLAMMRGGSAPQPSSRPAWMADVPSAATLFDGAASAP HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHCCCCCCC ADAAPAQASEPAAAPQADDSDDAHPLGFAVAQLHGIYVLAQNARGMVLVDMHAAHERILY CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEECCCCEEEEEHHHHHHHHHH EQLKTALEARRIEVQPLLIPVTFAASPVEIGTAEEFGDTLDLLGFDISAVSPTTLAVRAV HHHHHHHHHHCEEECEEEEEEEECCCCCCCCCHHHHCCHHHHHCCCCCCCCCHHHHHHHH PTLLQKADAQALARDVLRDLQAYGGSRVLAERQNELLATLACHSAVRANRRLNLDEMNAL HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LRQMEATERADQCNHGRPTWIQLTVADLDRLFLRGQ HHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCC >Mature Secondary Structure TAATPARRPIRPLPDQLISQIAAGEVVERPASVVKELLENALDAGATQLQIKLEEGGVR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEE RIAITDNGGGIPVDELPVALMRHATSKIGSLEELESVATLGFRGEALASIASVAELTLTS EEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RTAQDAHATQIIAQTGRVQPASGGVGTTVDVQHLYFNTPARRKFLKTEQTELGHCLEVIR CCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHEEECCHHHHHHHHHHHHHHHHHHHHHH RTALARPDVAISVHHNGKPLEHWNAAQADMRTAAVLGTEFARARLPFEEAAGELRLFGFA HHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEEE GLPTASRGRADHQFFYVNGRFVRDRLLTHAVRSAYEDVLHGDRFPAYVLCLELPPEAVDV CCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEE NVHPSKIEVRFRDSRAVHQFVYHAVQRALSRHAGEQGDSLRTDIADAPEQPGATATPADN EECCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCC TTRWVNQMAARQTSLGIAQPRAEYLAMMRGGSAPQPSSRPAWMADVPSAATLFDGAASAP HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHCCCCCCC ADAAPAQASEPAAAPQADDSDDAHPLGFAVAQLHGIYVLAQNARGMVLVDMHAAHERILY CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEECCCCEEEEEHHHHHHHHHH EQLKTALEARRIEVQPLLIPVTFAASPVEIGTAEEFGDTLDLLGFDISAVSPTTLAVRAV HHHHHHHHHHCEEECEEEEEEEECCCCCCCCCHHHHCCHHHHHCCCCCCCCCHHHHHHHH PTLLQKADAQALARDVLRDLQAYGGSRVLAERQNELLATLACHSAVRANRRLNLDEMNAL HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LRQMEATERADQCNHGRPTWIQLTVADLDRLFLRGQ HHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852