Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

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The map label for this gene is yfeH [C]

Identifier: 17547257

GI number: 17547257

Start: 2746191

End: 2747267

Strand: Direct

Name: yfeH [C]

Synonym: RSc2538

Alternate gene names: 17547257

Gene position: 2746191-2747267 (Clockwise)

Preceding gene: 17547255

Following gene: 17547260

Centisome position: 73.89

GC content: 66.95

Gene sequence:

>1077_bases
ATGGCGTGCAATAGCGGCCATCCCTTGATCCGATCGGCGCCGTGGCGGCGCAAGCACATGAAGATCCCCTTCCTTTCCCG
CATCGACGGCTTCATCCGCGCCATGCTGGTGATGGTCCTGCTGGCCCTGCTGTTCCCGTCGCTGGGCGCGAGCGCGGGGC
CGCTGCACCTCGATATCGTCACCGTGCTGGGGGTGTCGCTGGTGTTCTTCCTGCACGGCGCGGCGCTGTCGCGCGAGAAG
ATCGTCGAAGGCGCGCGCAACTGGCGCCTGCACCTGTTCGTGCAGAGCTGCACGTTCGTCCTGTTCCCGCTGATCGGCGC
GGCGATCCTGGTCGCATGCAAGCCCTTCATCCCGGCCGAGCTGCTGCTGGGCGTGTTCTACCTGTGCGCGCTGCCGTCCA
CGGTGTCGTCGTCGGTGGCGATGACCGCGATGGCCAAGGGAAACGTGCCGGCCGCCATCTTCAATGCCACCATCTCGGGC
CTGATCGGCATGGTGGCCACGCCGCTGCTGATGAGCTTCGTGATCCAGGCCTCCGGCGCGGAGCTGCCGGTCGGCAAGGC
ACTGCTGGGCGTGGCCGAGCAGTTGCTGCTGCCCTTCGTGCTGGGCCAGCTGCTGCGCCCGGCCATCGGCGGCTTCATCA
CGCGGTATAAGGCGATCATCAACAAGGTCGATCGCGCGGTGATCCTGCTGATCGTCTTCAACTCGTTCGCCGATTCGACA
CATGCGGGCGTGTGGTCGAAGTATCCGTGGGAGACCATCGTCGCCGTGGCGATCATGAGCGGCGCGCTGCTGTTCGTGGT
GCTGGGCGCGACGACGTGGATCGCGCGGCGCTTCGGCTTCGGCCTGGCCGATGAGATCACCGCCGTGTTCTGCGGCTCGA
AGAAGAGCCTGGCCAACGGCGTGCCGATGGCGAAGATCCTGTTTGCCGGCAACCCGGCGCTGGGCCTGATCGTGCTGCCG
ATCATGATCTATCACCAGCTGCAACTGATCGTCTGCTCGACGCTGGCGCGCCGGTACGCGGATCGCATCGCGCACGCGGA
AGACCGGGCCGCCGACCGCGCCGGCCAGCCCGCCTGA

Upstream 100 bases:

>100_bases
CGCGTGCCACGGCAAGGAAGACGCGCAACTGGCGCAGCGTCACATTCATGTGAGTACCGTATGAATTGATTCGATCAATG
CATTTGTATTCTAGGCGGGG

Downstream 100 bases:

>100_bases
TCGGCCACACCACGATCTACGCCGGCGCGCTCAGGACAGCATCGCCGCCGGCCGTCACACGCCCGGATTGCGCGACAGCG
GCGGGTTCTTGGCGAAGTAG

Product: lipoprotein transmembrane

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MACNSGHPLIRSAPWRRKHMKIPFLSRIDGFIRAMLVMVLLALLFPSLGASAGPLHLDIVTVLGVSLVFFLHGAALSREK
IVEGARNWRLHLFVQSCTFVLFPLIGAAILVACKPFIPAELLLGVFYLCALPSTVSSSVAMTAMAKGNVPAAIFNATISG
LIGMVATPLLMSFVIQASGAELPVGKALLGVAEQLLLPFVLGQLLRPAIGGFITRYKAIINKVDRAVILLIVFNSFADST
HAGVWSKYPWETIVAVAIMSGALLFVVLGATTWIARRFGFGLADEITAVFCGSKKSLANGVPMAKILFAGNPALGLIVLP
IMIYHQLQLIVCSTLARRYADRIAHAEDRAADRAGQPA

Sequences:

>Translated_358_residues
MACNSGHPLIRSAPWRRKHMKIPFLSRIDGFIRAMLVMVLLALLFPSLGASAGPLHLDIVTVLGVSLVFFLHGAALSREK
IVEGARNWRLHLFVQSCTFVLFPLIGAAILVACKPFIPAELLLGVFYLCALPSTVSSSVAMTAMAKGNVPAAIFNATISG
LIGMVATPLLMSFVIQASGAELPVGKALLGVAEQLLLPFVLGQLLRPAIGGFITRYKAIINKVDRAVILLIVFNSFADST
HAGVWSKYPWETIVAVAIMSGALLFVVLGATTWIARRFGFGLADEITAVFCGSKKSLANGVPMAKILFAGNPALGLIVLP
IMIYHQLQLIVCSTLARRYADRIAHAEDRAADRAGQPA
>Mature_357_residues
ACNSGHPLIRSAPWRRKHMKIPFLSRIDGFIRAMLVMVLLALLFPSLGASAGPLHLDIVTVLGVSLVFFLHGAALSREKI
VEGARNWRLHLFVQSCTFVLFPLIGAAILVACKPFIPAELLLGVFYLCALPSTVSSSVAMTAMAKGNVPAAIFNATISGL
IGMVATPLLMSFVIQASGAELPVGKALLGVAEQLLLPFVLGQLLRPAIGGFITRYKAIINKVDRAVILLIVFNSFADSTH
AGVWSKYPWETIVAVAIMSGALLFVVLGATTWIARRFGFGLADEITAVFCGSKKSLANGVPMAKILFAGNPALGLIVLPI
MIYHQLQLIVCSTLARRYADRIAHAEDRAADRAGQPA

Specific function: Unknown

COG id: COG0385

COG function: function code R; Predicted Na+-dependent transporter

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfeH [H]

Homologues:

Organism=Homo sapiens, GI71725371, Length=316, Percent_Identity=31.6455696202532, Blast_Score=132, Evalue=5e-31,
Organism=Escherichia coli, GI1788749, Length=334, Percent_Identity=44.9101796407186, Blast_Score=256, Evalue=1e-69,
Organism=Saccharomyces cerevisiae, GI6323677, Length=394, Percent_Identity=21.0659898477157, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002657
- InterPro:   IPR016833 [H]

Pfam domain/function: PF01758 SBF [H]

EC number: NA

Molecular weight: Translated: 38296; Mature: 38165

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MACNSGHPLIRSAPWRRKHMKIPFLSRIDGFIRAMLVMVLLALLFPSLGASAGPLHLDIV
CCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
TVLGVSLVFFLHGAALSREKIVEGARNWRLHLFVQSCTFVLFPLIGAAILVACKPFIPAE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LLLGVFYLCALPSTVSSSVAMTAMAKGNVPAAIFNATISGLIGMVATPLLMSFVIQASGA
HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ELPVGKALLGVAEQLLLPFVLGQLLRPAIGGFITRYKAIINKVDRAVILLIVFNSFADST
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HAGVWSKYPWETIVAVAIMSGALLFVVLGATTWIARRFGFGLADEITAVFCGSKKSLANG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHCC
VPMAKILFAGNPALGLIVLPIMIYHQLQLIVCSTLARRYADRIAHAEDRAADRAGQPA
CCHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ACNSGHPLIRSAPWRRKHMKIPFLSRIDGFIRAMLVMVLLALLFPSLGASAGPLHLDIV
CCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
TVLGVSLVFFLHGAALSREKIVEGARNWRLHLFVQSCTFVLFPLIGAAILVACKPFIPAE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LLLGVFYLCALPSTVSSSVAMTAMAKGNVPAAIFNATISGLIGMVATPLLMSFVIQASGA
HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ELPVGKALLGVAEQLLLPFVLGQLLRPAIGGFITRYKAIINKVDRAVILLIVFNSFADST
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HAGVWSKYPWETIVAVAIMSGALLFVVLGATTWIARRFGFGLADEITAVFCGSKKSLANG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHCC
VPMAKILFAGNPALGLIVLPIMIYHQLQLIVCSTLARRYADRIAHAEDRAADRAGQPA
CCHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 1849605 [H]