| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17547244
Identifier: 17547244
GI number: 17547244
Start: 2731964
End: 2732932
Strand: Direct
Name: 17547244
Synonym: RSc2525
Alternate gene names: NA
Gene position: 2731964-2732932 (Clockwise)
Preceding gene: 17547243
Following gene: 17547247
Centisome position: 73.51
GC content: 61.61
Gene sequence:
>969_bases GTGCCGAACAACCATGACGTCAATCCGTACGGCATTGCTTTCGTGCCTGCCGGCTTGCCAGCGGGGAGCGCGCTGCAGGC GGGGGACGTCGTGGTGTCCAATTTCAACGCCGCCTCCAACAAGCAAGGCACGGGAACGACCATCGTGAAGCTTGTGACCG ACGGCAAGCCGGTCACCTTTTTCCAGGGGCAGAATCTGGGGCTGACCACCGCGCTGGCTGTACTGAAGAGCGGGTATGTG CTGGTCGGCAACCTTCCGACGACGAATGGCGCAACCATTACCTCAACCGGCTCGCTATTGGTGATCACCCCCCAGGGAAA GCTTCTCAGCGAGCTGAAAGACCCAACCCTCCTGGACGGTCCGTGGGACATGACCGTCATCATCGATAACGGCCAGCAGG TCACGGCGTTCGTGTCGAACGTGTTGAACGGAACGGTGGCAAGGATCGATCTCAACATTGGCCCGAACGGCGCGACGCTC TTGCAAAGCTCGCACCTCATCGCGTCCGGCTACGCGCACCGGCCCGATCCTGCCGCGCTCGTTGTCGGCCCAACAGGACT GGCCTATGACGCGGCCCACGATATGCTTTATGTCGCATCAACGAACGACAATAAGGTGTTCGCCATAGCGGGCGCTGCGG CGCTCGCGCATGACAACGGACCGGGAAGTGTCATCTATCAAGACAGCAACCACCTTCGCGGACCATTGGCATTGGCGCTT GCGCCGAATGGCGATCTGGTGACGGCGAACGGCGACGCGATCAACCCCGATCCGAATCAATCGAGCGAAATCGTCGAGTT CACGCCCGATGGACGTTTCGTCGCGCAGATGCAGGTCGACCCCGCGCCTGGCTCCGCATTCGGCCTCGCATTTGGACTGA GCAGCAGCGGCCAGCCACAATTCGCGGCGGTGAACGACAGCACGAATACCGCCATCGTCTGGACGTTGCGCCCGGTCGGC GGCAATTGA
Upstream 100 bases:
>100_bases CGGCGTCATCTGTGGCATCGGCCTCGTTGTACTGTCGTTGGGATCTTCCCTTGCAGGCGGACAGCCAATCCTTCCACCAA CATCCACGGTTGCGTCGACC
Downstream 100 bases:
>100_bases CCTTGGGGAGGGGGGCTGCGCCGGTACCTGGCGCGCGTTGGTGTCAAATTCAACGGCCGCGGCCTTGCGGCGCACAGGGC TTCGGTGACGCGCCACCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MPNNHDVNPYGIAFVPAGLPAGSALQAGDVVVSNFNAASNKQGTGTTIVKLVTDGKPVTFFQGQNLGLTTALAVLKSGYV LVGNLPTTNGATITSTGSLLVITPQGKLLSELKDPTLLDGPWDMTVIIDNGQQVTAFVSNVLNGTVARIDLNIGPNGATL LQSSHLIASGYAHRPDPAALVVGPTGLAYDAAHDMLYVASTNDNKVFAIAGAAALAHDNGPGSVIYQDSNHLRGPLALAL APNGDLVTANGDAINPDPNQSSEIVEFTPDGRFVAQMQVDPAPGSAFGLAFGLSSSGQPQFAAVNDSTNTAIVWTLRPVG GN
Sequences:
>Translated_322_residues MPNNHDVNPYGIAFVPAGLPAGSALQAGDVVVSNFNAASNKQGTGTTIVKLVTDGKPVTFFQGQNLGLTTALAVLKSGYV LVGNLPTTNGATITSTGSLLVITPQGKLLSELKDPTLLDGPWDMTVIIDNGQQVTAFVSNVLNGTVARIDLNIGPNGATL LQSSHLIASGYAHRPDPAALVVGPTGLAYDAAHDMLYVASTNDNKVFAIAGAAALAHDNGPGSVIYQDSNHLRGPLALAL APNGDLVTANGDAINPDPNQSSEIVEFTPDGRFVAQMQVDPAPGSAFGLAFGLSSSGQPQFAAVNDSTNTAIVWTLRPVG GN >Mature_321_residues PNNHDVNPYGIAFVPAGLPAGSALQAGDVVVSNFNAASNKQGTGTTIVKLVTDGKPVTFFQGQNLGLTTALAVLKSGYVL VGNLPTTNGATITSTGSLLVITPQGKLLSELKDPTLLDGPWDMTVIIDNGQQVTAFVSNVLNGTVARIDLNIGPNGATLL QSSHLIASGYAHRPDPAALVVGPTGLAYDAAHDMLYVASTNDNKVFAIAGAAALAHDNGPGSVIYQDSNHLRGPLALALA PNGDLVTANGDAINPDPNQSSEIVEFTPDGRFVAQMQVDPAPGSAFGLAFGLSSSGQPQFAAVNDSTNTAIVWTLRPVGG N
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32902; Mature: 32771
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNNHDVNPYGIAFVPAGLPAGSALQAGDVVVSNFNAASNKQGTGTTIVKLVTDGKPVTF CCCCCCCCEEEEEEEECCCCCCCCEECCCEEEEECCCCCCCCCCCEEEEEEEECCCEEEE FQGQNLGLTTALAVLKSGYVLVGNLPTTNGATITSTGSLLVITPQGKLLSELKDPTLLDG EECCCCCHHHHHHHHHCCEEEECCCCCCCCEEEEECCCEEEECCCCHHHHHHCCCEEECC PWDMTVIIDNGQQVTAFVSNVLNGTVARIDLNIGPNGATLLQSSHLIASGYAHRPDPAAL CCEEEEEEECCCEEHHHHHHHHCCEEEEEEEEECCCCCEEEECCCEEECCCCCCCCCCEE VVGPTGLAYDAAHDMLYVASTNDNKVFAIAGAAALAHDNGPGSVIYQDSNHLRGPLALAL EECCCCCEEECCCCEEEEEECCCCEEEEEEEEEEEEECCCCCEEEEECCCCCCCEEEEEE APNGDLVTANGDAINPDPNQSSEIVEFTPDGRFVAQMQVDPAPGSAFGLAFGLSSSGQPQ CCCCCEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCEEEEEEECCCCCCCC FAAVNDSTNTAIVWTLRPVGGN EEEECCCCCEEEEEEEEECCCC >Mature Secondary Structure PNNHDVNPYGIAFVPAGLPAGSALQAGDVVVSNFNAASNKQGTGTTIVKLVTDGKPVTF CCCCCCCEEEEEEEECCCCCCCCEECCCEEEEECCCCCCCCCCCEEEEEEEECCCEEEE FQGQNLGLTTALAVLKSGYVLVGNLPTTNGATITSTGSLLVITPQGKLLSELKDPTLLDG EECCCCCHHHHHHHHHCCEEEECCCCCCCCEEEEECCCEEEECCCCHHHHHHCCCEEECC PWDMTVIIDNGQQVTAFVSNVLNGTVARIDLNIGPNGATLLQSSHLIASGYAHRPDPAAL CCEEEEEEECCCEEHHHHHHHHCCEEEEEEEEECCCCCEEEECCCEEECCCCCCCCCCEE VVGPTGLAYDAAHDMLYVASTNDNKVFAIAGAAALAHDNGPGSVIYQDSNHLRGPLALAL EECCCCCEEECCCCEEEEEECCCCEEEEEEEEEEEEECCCCCEEEEECCCCCCCEEEEEE APNGDLVTANGDAINPDPNQSSEIVEFTPDGRFVAQMQVDPAPGSAFGLAFGLSSSGQPQ CCCCCEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCEEEEEEECCCCCCCC FAAVNDSTNTAIVWTLRPVGGN EEEECCCCCEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA