Click here to switch to the map view.

The map label for this gene is yxjC [H]

Identifier: 17547237

GI number: 17547237

Start: 2725095

End: 2726495

Strand: Reverse

Name: yxjC [H]

Synonym: RSc2518

Alternate gene names: 17547237

Gene position: 2726495-2725095 (Counterclockwise)

Preceding gene: 17547238

Following gene: 17547232

Centisome position: 73.36

GC content: 68.24

Gene sequence:

>1401_bases
ATGTCCGTTGTCGTGGTCCTTGCCGCCCTGGCATTCCTGATGTTCGCCGCCTATCGCGGCTACAGCGTGATCCTGTTCGC
ACCGCTCGCCGCCCTGGGCGCGGTGTTGCTGACCGACCCGTCCGCCGTGGCGCCGGTCTTTGCCGGCATCTTCATGGAGA
AGCTGGTCGGCTTCGTCAAACTCTACTTCCCGGTGTTCCTGCTCGGCGCGGTGTTCGGCAAGGTGATCGAGCTGTCGGGC
TTTTCGCGCGCGATCGTCGCGTCGGTCATCCGCGTGGTGGGCGCGCAGCGGGCGATGCTGTCGATCGTGCTGGTGTGCGC
GCTGCTGACCTACGGCGGCGTGTCGCTGTTCGTGGTGGTGTTCGCGGTGTACCCGTTCGCGGCGGAGATGTTCCGCCAGG
GCAATATCCCGAAGCGGCTGATCCCGGGCACCATCGCGCTGGGCGCGTTCTCGTTCACGATGGATTCGCTGCCGGGCACG
CCGCAGATCCAGAACATCATTCCCACCACGTTCTTCCACACCACCTCGTGGGCCGCGCCGTGGCTGGGCACCGCCGGTGC
GATCTTCATCCTGGCGGTGGGCATGGCCTACCTGGAGTGGCGCCGCCGCGCGGCCGTGCGTGCGTGCCATGGCTACGACG
CCGGCCTCGCCAGGCTCGTCAACGAGCCCGACACCGTGGCAGGCGGCAAGCTCGCGCATCCGCTGGTCGCGCTGCTGCCG
CTGGTGCTGGTGGGCGTGATGAACCTGCTGTTCACGCGCTGGATTCCCGAGTGGTACGGCAAGCTCGTCACCGTGGCGCT
GCCGGGCCTGCCCAAGCCGCTGACGGTCGAGGCCGACAAGCTGACCGCGATCTGGGCGGTGGAGGCCGCGCTGCTGATCG
GCATCGTTGTCGTGGTGGTGTCTGGCTTGCGCGCGGTGAAAGACCGCTTTGCCGAGGGCAGCAAGTCGGCGGTGGCGGGC
GCGCTGCTGGCGGCGATGAACACCGCATCGGAATATGGCTTCGGCGGCGTGATCGCGGCGCTGCCGGGCTTCCTGGTGCT
GGCCGGGGGGCTGCGCGCGATTCCCGATCCGCTGGTCAACGAAGCGGTGACGGTGAGTACGCTGGCCGGCATCACCGGCT
CGGCGTCGGGCGGCATGAGCATCGCGCTGGCTGCCATGGCCGACGCGTTCGTGCAGGCCGCGCAGGCGACCGGCATCCCG
ATGGAGGTGCTGCACCGCGTGGCATCGATGGCCTCGGGCGGCATGGACACGCTGCCCCACAACGGCGCCGTCATCACGCT
GCTCGCGGTGACCGGCCTGACGCACCGCGAGGCTTATCGCGACATTTTCTGCGTCACGCTCATCAAGACGGCCGCGGTGT
TCTTCGTCATTGCCATGTTCTACGCCACGGGCATCGTCTGA

Upstream 100 bases:

>100_bases
ATTCCGCACGCAGTTCAATACGGATGATTGCGTAAGCAGGGACTGCTGCGACGCGGCATACAATCCTCGGCACATCAGAA
CCATACGAGGAGACAGGCCG

Downstream 100 bases:

>100_bases
TGCGGTGCCTGTCCCAAGCAAAAAAGCCGACGGATGACGTCGGCTTTTTCGTTGGCGCGCGCGGTGTCACGGCATGCCGC
CGGCAGCGGCGCCTGGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 465

Protein sequence:

>466_residues
MSVVVVLAALAFLMFAAYRGYSVILFAPLAALGAVLLTDPSAVAPVFAGIFMEKLVGFVKLYFPVFLLGAVFGKVIELSG
FSRAIVASVIRVVGAQRAMLSIVLVCALLTYGGVSLFVVVFAVYPFAAEMFRQGNIPKRLIPGTIALGAFSFTMDSLPGT
PQIQNIIPTTFFHTTSWAAPWLGTAGAIFILAVGMAYLEWRRRAAVRACHGYDAGLARLVNEPDTVAGGKLAHPLVALLP
LVLVGVMNLLFTRWIPEWYGKLVTVALPGLPKPLTVEADKLTAIWAVEAALLIGIVVVVVSGLRAVKDRFAEGSKSAVAG
ALLAAMNTASEYGFGGVIAALPGFLVLAGGLRAIPDPLVNEAVTVSTLAGITGSASGGMSIALAAMADAFVQAAQATGIP
MEVLHRVASMASGGMDTLPHNGAVITLLAVTGLTHREAYRDIFCVTLIKTAAVFFVIAMFYATGIV

Sequences:

>Translated_466_residues
MSVVVVLAALAFLMFAAYRGYSVILFAPLAALGAVLLTDPSAVAPVFAGIFMEKLVGFVKLYFPVFLLGAVFGKVIELSG
FSRAIVASVIRVVGAQRAMLSIVLVCALLTYGGVSLFVVVFAVYPFAAEMFRQGNIPKRLIPGTIALGAFSFTMDSLPGT
PQIQNIIPTTFFHTTSWAAPWLGTAGAIFILAVGMAYLEWRRRAAVRACHGYDAGLARLVNEPDTVAGGKLAHPLVALLP
LVLVGVMNLLFTRWIPEWYGKLVTVALPGLPKPLTVEADKLTAIWAVEAALLIGIVVVVVSGLRAVKDRFAEGSKSAVAG
ALLAAMNTASEYGFGGVIAALPGFLVLAGGLRAIPDPLVNEAVTVSTLAGITGSASGGMSIALAAMADAFVQAAQATGIP
MEVLHRVASMASGGMDTLPHNGAVITLLAVTGLTHREAYRDIFCVTLIKTAAVFFVIAMFYATGIV
>Mature_465_residues
SVVVVLAALAFLMFAAYRGYSVILFAPLAALGAVLLTDPSAVAPVFAGIFMEKLVGFVKLYFPVFLLGAVFGKVIELSGF
SRAIVASVIRVVGAQRAMLSIVLVCALLTYGGVSLFVVVFAVYPFAAEMFRQGNIPKRLIPGTIALGAFSFTMDSLPGTP
QIQNIIPTTFFHTTSWAAPWLGTAGAIFILAVGMAYLEWRRRAAVRACHGYDAGLARLVNEPDTVAGGKLAHPLVALLPL
VLVGVMNLLFTRWIPEWYGKLVTVALPGLPKPLTVEADKLTAIWAVEAALLIGIVVVVVSGLRAVKDRFAEGSKSAVAGA
LLAAMNTASEYGFGGVIAALPGFLVLAGGLRAIPDPLVNEAVTVSTLAGITGSASGGMSIALAAMADAFVQAAQATGIPM
EVLHRVASMASGGMDTLPHNGAVITLLAVTGLTHREAYRDIFCVTLIKTAAVFFVIAMFYATGIV

Specific function: Unknown

COG id: COG2610

COG function: function code GE; H+/gluconate symporter and related permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004680 [H]

Pfam domain/function: PF03600 CitMHS [H]

EC number: NA

Molecular weight: Translated: 48673; Mature: 48541

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SVVVVLAALAFLMFAAYRGYSVILFAPLAALGAVLLTDPSAVAPVFAGIFMEKLVGFVK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH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CCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377; 10568751 [H]