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The map label for this gene is yphA [H]

Identifier: 17547219

GI number: 17547219

Start: 2706732

End: 2707142

Strand: Reverse

Name: yphA [H]

Synonym: RSc2500

Alternate gene names: 17547219

Gene position: 2707142-2706732 (Counterclockwise)

Preceding gene: 17547221

Following gene: 17547217

Centisome position: 72.84

GC content: 63.26

Gene sequence:

>411_bases
ATGAACGCAGCCATCGAACGTTGGCGCGACGAGCTCATCCTGCTCGGTCGCGTGCTGATGATGCTCCTGTTCCTGATTTC
CGGCTGGGGCAAACTGACCGGTTTTTCCGCCACCGTCGGCTACATGGGGACGGTGGGCGCGCCGATGCCGATGCTCGCGG
CCATCGTCGCGGTGATCATGGAGTTCGGCGTGGGCATCGCTCTGCTGATCGGCTTCTGGACCCGCCCGCTGGCGCTGCTG
ATGGCGCTGTTCGTGCTGGGCACCGCGCTGATCGCCCATACCTACTGGAACGTCGAGGGTGCGATGCAGACCGCCAACAT
GGTGCAGTTCTACAAGAACCTCAGCATCATGGGCGGCCTGATCCTGCTGTCCGTGACGGGCGCGGGCAAGTACGCGTTGC
AGAAATCCTAG

Upstream 100 bases:

>100_bases
GATTACGTGTGATTCGGCCCATACTCGATGCGCTCGAAACCACACTTGGCACGGTCAGCGCCTAGACTTGAGGTATCTGC
CACTCGGCCTGGAGGCCGCC

Downstream 100 bases:

>100_bases
CGCTCAGCGCAGCGAGCGCTGGACCATCACCACCACCGCGAACACGCCGCACGCCACGGCGAACCCGCTGAACAGCTGCG
TGCCGGCCAGCAGCGTGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MNAAIERWRDELILLGRVLMMLLFLISGWGKLTGFSATVGYMGTVGAPMPMLAAIVAVIMEFGVGIALLIGFWTRPLALL
MALFVLGTALIAHTYWNVEGAMQTANMVQFYKNLSIMGGLILLSVTGAGKYALQKS

Sequences:

>Translated_136_residues
MNAAIERWRDELILLGRVLMMLLFLISGWGKLTGFSATVGYMGTVGAPMPMLAAIVAVIMEFGVGIALLIGFWTRPLALL
MALFVLGTALIAHTYWNVEGAMQTANMVQFYKNLSIMGGLILLSVTGAGKYALQKS
>Mature_136_residues
MNAAIERWRDELILLGRVLMMLLFLISGWGKLTGFSATVGYMGTVGAPMPMLAAIVAVIMEFGVGIALLIGFWTRPLALL
MALFVLGTALIAHTYWNVEGAMQTANMVQFYKNLSIMGGLILLSVTGAGKYALQKS

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

Organism=Escherichia coli, GI145693171, Length=127, Percent_Identity=48.0314960629921, Blast_Score=130, Evalue=5e-32,
Organism=Escherichia coli, GI87082210, Length=131, Percent_Identity=41.2213740458015, Blast_Score=94, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 14687; Mature: 14687

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.1 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.1 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAAIERWRDELILLGRVLMMLLFLISGWGKLTGFSATVGYMGTVGAPMPMLAAIVAVIM
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHH
EFGVGIALLIGFWTRPLALLMALFVLGTALIAHTYWNVEGAMQTANMVQFYKNLSIMGGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
ILLSVTGAGKYALQKS
HHHEECCCCCCCCCCC
>Mature Secondary Structure
MNAAIERWRDELILLGRVLMMLLFLISGWGKLTGFSATVGYMGTVGAPMPMLAAIVAVIM
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHH
EFGVGIALLIGFWTRPLALLMALFVLGTALIAHTYWNVEGAMQTANMVQFYKNLSIMGGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
ILLSVTGAGKYALQKS
HHHEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]