Click here to switch to the map view.

The map label for this gene is 17547213

Identifier: 17547213

GI number: 17547213

Start: 2701165

End: 2701617

Strand: Direct

Name: 17547213

Synonym: RSc2494

Alternate gene names: NA

Gene position: 2701165-2701617 (Clockwise)

Preceding gene: 17547212

Following gene: 17547214

Centisome position: 72.68

GC content: 66.45

Gene sequence:

>453_bases
ATGACCACCCTGTCCCGCCTTCTTGCCGGCCTGTCCCTGGCCGTGGCCGCCACCGGCGCGCTCGCGCAGACGCCGACCGG
ACCGAACACCGGCCTGCCCACCGTCGACCTGACCATCGGCATGTACAAGGTCCATACCGAAGTGGCCGCCACGCAGCCGG
CGCGCGAGACCGGCCTGATGTTCCGCAAGTCGATGCCTGACACGGCCGGCATGCTGTTCGTGTTCGACGAATCGGCGCGC
CACTGCTTCTGGATGAAGAACACCGACCTGCCGCTGTCGATCGCCTTCATCGACGACAACGGCGTCATCACGGATATCGC
GGAGATGAAGCCGCAGACCGAGGACAACCACTGCCCCACCCGGCCGGGCCTCTACGCGCTGGAAATGAACAAGGGCTGGT
TCACCCGCAAGGGGATCAAGGTCGGCACCAAGGTCGGCTCGCTGCCCCGCTGA

Upstream 100 bases:

>100_bases
GCCGTAACAACTTCGGCGGCCGGGCACCGCGCCGCCGCATTGACGGCGGCGGGCCGAGTGCCGATCATGGAACGTTTCGT
TGGCTCTCCCTCTCTGCCCC

Downstream 100 bases:

>100_bases
CACGACAACCCATCCGACCGGACGAGGAAACCACCGCATGCAAGCTTTCGACAACAACCGTCGCCGCTGGATGCGGCAGG
CCGGGGCGCTGGCCGCCGGC

Product: signal peptide protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MTTLSRLLAGLSLAVAATGALAQTPTGPNTGLPTVDLTIGMYKVHTEVAATQPARETGLMFRKSMPDTAGMLFVFDESAR
HCFWMKNTDLPLSIAFIDDNGVITDIAEMKPQTEDNHCPTRPGLYALEMNKGWFTRKGIKVGTKVGSLPR

Sequences:

>Translated_150_residues
MTTLSRLLAGLSLAVAATGALAQTPTGPNTGLPTVDLTIGMYKVHTEVAATQPARETGLMFRKSMPDTAGMLFVFDESAR
HCFWMKNTDLPLSIAFIDDNGVITDIAEMKPQTEDNHCPTRPGLYALEMNKGWFTRKGIKVGTKVGSLPR
>Mature_149_residues
TTLSRLLAGLSLAVAATGALAQTPTGPNTGLPTVDLTIGMYKVHTEVAATQPARETGLMFRKSMPDTAGMLFVFDESARH
CFWMKNTDLPLSIAFIDDNGVITDIAEMKPQTEDNHCPTRPGLYALEMNKGWFTRKGIKVGTKVGSLPR

Specific function: Unknown

COG id: COG1430

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16256; Mature: 16125

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLSRLLAGLSLAVAATGALAQTPTGPNTGLPTVDLTIGMYKVHTEVAATQPARETGLM
CCHHHHHHHHHHHEEHHCCCCEECCCCCCCCCCEEEEEEEEEEEEHHHHCCCCCHHHHHE
FRKSMPDTAGMLFVFDESARHCFWMKNTDLPLSIAFIDDNGVITDIAEMKPQTEDNHCPT
EECCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEHHHCCCCCCCCCCCC
RPGLYALEMNKGWFTRKGIKVGTKVGSLPR
CCCEEEEEECCCEEEECCEEECCCCCCCCC
>Mature Secondary Structure 
TTLSRLLAGLSLAVAATGALAQTPTGPNTGLPTVDLTIGMYKVHTEVAATQPARETGLM
CHHHHHHHHHHHEEHHCCCCEECCCCCCCCCCEEEEEEEEEEEEHHHHCCCCCHHHHHE
FRKSMPDTAGMLFVFDESARHCFWMKNTDLPLSIAFIDDNGVITDIAEMKPQTEDNHCPT
EECCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEHHHCCCCCCCCCCCC
RPGLYALEMNKGWFTRKGIKVGTKVGSLPR
CCCEEEEEECCCEEEECCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA