| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17547211
Identifier: 17547211
GI number: 17547211
Start: 2698217
End: 2699725
Strand: Direct
Name: 17547211
Synonym: RSc2492
Alternate gene names: NA
Gene position: 2698217-2699725 (Clockwise)
Preceding gene: 17547210
Following gene: 17547212
Centisome position: 72.6
GC content: 70.05
Gene sequence:
>1509_bases ATGGAAATTCGATCGATGTTCCCGACGGTGCGCCACGCACGTACCGCCTGCACGATGGCCACACTCGCTGCACTGACCGC CGCTGCCATCATCGCCGGCTGCGGCGACACCTCCGATTCCGGCGCGGGGACGGCCACGCCGGCCGATGCCGCCACGGCCG ACGCCAACATCCAGGCGGCCTGGGTCGAGATCGACGACAGCAACCAGGCCGTGGTGCGCGCCGTCACCCGCTACACGAAC GACGCATCGCCGACCGACAGTTCCGTCTGCCCGCTGCTGACCGTGGACGGCACGGCCACCCGCATGAGCCTGCGCGTGGC CGCCGGCATCGTGCCGCAGCGGACCACCGCGAGCGCGGCCAGTGACTCGAAAGCGTCCGCCTTCCCGGTCAGCGCCTGCG AAGCGACGGTGCCGGCCGGCGCCCAGGCGGTGTCGATCGGCCCGCGCGCGCTGCCGCTGCCCAAGGCCAGCCCGCAGCGC GTGGTGATCCTGGCCGATACCGGCTGCCGCCTGAAGACGTCCAGCAATACCTTCCAGGCGTGCTCGGATGCCACGCAATG GCCGTTCGCCACCGCCGCGGCCACGGCCGCCGCGATGAACCCCGACCTGGTGCTGCACGTGGGCGACTACCACTACCGCG AAAACGCCTGCCCATCGGATGTGGCCGGCTGCCAGGACAGTCCCTGGGGCTACGGCTGGGATACGTGGCAGGCCGACCTG TTCCAGCCCGCCGCCCCGCTGCTGGCCGCCGCCCCATGGGTGGTGGTGCGCGGCAACCATGAGGAATGCGCGCGCGCCGG CCAGGGCTGGTTCCGCTTCCTGGATCCGCGCGCCTACTCGGCCGCGCGCTCCTGCGACGACCCCGCCAACGACACCGCGG CCAATGCCTCGGAGCCGTACGCCGTGGCCATCGGCACCGATACACAGGCGATCGTGTTCGATTCCGCGAAAGCGGGCACG AAGGCGCTGGCGACCACCGACCCGTGGTTCCAGACCTACCAGAAGCAGTTCAGCACGGTCGGCACGCTGGCCGCCAGGCC GGGCGTGATGTCGATCTTCACCAACCACCACCCGATCCTGGGCTTCGTGCCGATCTCGGGCGGCACGCCGCTGGGCGGCA ACGCAGCACTGCTGTCGGTGATGAGCAGCCTGAACGCCACCGCCTACTATCCGCCGGGCGTGCAGGTCGCCCTGCACGGC CACGTGCATGATTTCCAGGCCATCAACTTCAGCAGCAACCATCCGGCGACCATCGTCGCGGGCAATGCCGGGGATTCGCT GGACGTGGCCCTGCCCGATCCGTTCCCGTCGATCAGCCCGGCCTCGGGCGTGACGGTCGGCAGCCTCTCGCACAACAACG CGTTCGGCTTCATGGTGATGGACCGCCAGCCGGCGCCCGCCACCGGCTGGCTGTTCAAGGCCTACACCGTCGCCGGCAAG CTGTTGACCACCTGCACGCAGAACGGCACCAGCCTGGTCTGCGACAAGACGGGATTCGTCGCGCCTTGA
Upstream 100 bases:
>100_bases GCCCTCGTCCGTCCGGCGGAACCTGCGGTGCTGTCAAAATAGCGCCATCTGGTTTGGGTACCGTGCCGCTTCCTCGCAAC AGGCAGAGAAGGGGCGGCGC
Downstream 100 bases:
>100_bases GCGGATCGACGATCTGGCGCCGCGTCGCCGGCACTGCCATGCTGGTCGCCGCGCTCGTCCCGGGTGCGGCGGGGGCCGGA TCGGTCGGCGACACGCCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Ser/Thr Protein Phosphatase Family Protein; Serine/Threonine Phosphoprotein Phosphatase; Metallo-Dependent Phosphatases; Calcineurin-Like Phosphoesterase; Phosphoesterase
Number of amino acids: Translated: 502; Mature: 502
Protein sequence:
>502_residues MEIRSMFPTVRHARTACTMATLAALTAAAIIAGCGDTSDSGAGTATPADAATADANIQAAWVEIDDSNQAVVRAVTRYTN DASPTDSSVCPLLTVDGTATRMSLRVAAGIVPQRTTASAASDSKASAFPVSACEATVPAGAQAVSIGPRALPLPKASPQR VVILADTGCRLKTSSNTFQACSDATQWPFATAAATAAAMNPDLVLHVGDYHYRENACPSDVAGCQDSPWGYGWDTWQADL FQPAAPLLAAAPWVVVRGNHEECARAGQGWFRFLDPRAYSAARSCDDPANDTAANASEPYAVAIGTDTQAIVFDSAKAGT KALATTDPWFQTYQKQFSTVGTLAARPGVMSIFTNHHPILGFVPISGGTPLGGNAALLSVMSSLNATAYYPPGVQVALHG HVHDFQAINFSSNHPATIVAGNAGDSLDVALPDPFPSISPASGVTVGSLSHNNAFGFMVMDRQPAPATGWLFKAYTVAGK LLTTCTQNGTSLVCDKTGFVAP
Sequences:
>Translated_502_residues MEIRSMFPTVRHARTACTMATLAALTAAAIIAGCGDTSDSGAGTATPADAATADANIQAAWVEIDDSNQAVVRAVTRYTN DASPTDSSVCPLLTVDGTATRMSLRVAAGIVPQRTTASAASDSKASAFPVSACEATVPAGAQAVSIGPRALPLPKASPQR VVILADTGCRLKTSSNTFQACSDATQWPFATAAATAAAMNPDLVLHVGDYHYRENACPSDVAGCQDSPWGYGWDTWQADL FQPAAPLLAAAPWVVVRGNHEECARAGQGWFRFLDPRAYSAARSCDDPANDTAANASEPYAVAIGTDTQAIVFDSAKAGT KALATTDPWFQTYQKQFSTVGTLAARPGVMSIFTNHHPILGFVPISGGTPLGGNAALLSVMSSLNATAYYPPGVQVALHG HVHDFQAINFSSNHPATIVAGNAGDSLDVALPDPFPSISPASGVTVGSLSHNNAFGFMVMDRQPAPATGWLFKAYTVAGK LLTTCTQNGTSLVCDKTGFVAP >Mature_502_residues MEIRSMFPTVRHARTACTMATLAALTAAAIIAGCGDTSDSGAGTATPADAATADANIQAAWVEIDDSNQAVVRAVTRYTN DASPTDSSVCPLLTVDGTATRMSLRVAAGIVPQRTTASAASDSKASAFPVSACEATVPAGAQAVSIGPRALPLPKASPQR VVILADTGCRLKTSSNTFQACSDATQWPFATAAATAAAMNPDLVLHVGDYHYRENACPSDVAGCQDSPWGYGWDTWQADL FQPAAPLLAAAPWVVVRGNHEECARAGQGWFRFLDPRAYSAARSCDDPANDTAANASEPYAVAIGTDTQAIVFDSAKAGT KALATTDPWFQTYQKQFSTVGTLAARPGVMSIFTNHHPILGFVPISGGTPLGGNAALLSVMSSLNATAYYPPGVQVALHG HVHDFQAINFSSNHPATIVAGNAGDSLDVALPDPFPSISPASGVTVGSLSHNNAFGFMVMDRQPAPATGWLFKAYTVAGK LLTTCTQNGTSLVCDKTGFVAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51926; Mature: 51926
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00125 SER_THR_PHOSPHATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIRSMFPTVRHARTACTMATLAALTAAAIIAGCGDTSDSGAGTATPADAATADANIQAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEE WVEIDDSNQAVVRAVTRYTNDASPTDSSVCPLLTVDGTATRMSLRVAAGIVPQRTTASAA EEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEEHHCCCCCCCCCCCC SDSKASAFPVSACEATVPAGAQAVSIGPRALPLPKASPQRVVILADTGCRLKTSSNTFQA CCCCCCCCCCHHHCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCEEEECCCHHHH CSDATQWPFATAAATAAAMNPDLVLHVGDYHYRENACPSDVAGCQDSPWGYGWDTWQADL HCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHH FQPAAPLLAAAPWVVVRGNHEECARAGQGWFRFLDPRAYSAARSCDDPANDTAANASEPY HCCCHHHHHCCCEEEEECCHHHHHHCCCCCEEEECCHHHHHHHCCCCCCCCCCCCCCCCE AVAIGTDTQAIVFDSAKAGTKALATTDPWFQTYQKQFSTVGTLAARPGVMSIFTNHHPIL EEEECCCCEEEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEE GFVPISGGTPLGGNAALLSVMSSLNATAYYPPGVQVALHGHVHDFQAINFSSNHPATIVA EEEECCCCCCCCCCHHHHHHHHHCCCCEECCCCCEEEEECCCEEEEEEECCCCCCEEEEE GNAGDSLDVALPDPFPSISPASGVTVGSLSHNNAFGFMVMDRQPAPATGWLFKAYTVAGK CCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHH LLTTCTQNGTSLVCDKTGFVAP HHHHHCCCCCEEEEECCCCCCC >Mature Secondary Structure MEIRSMFPTVRHARTACTMATLAALTAAAIIAGCGDTSDSGAGTATPADAATADANIQAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEE WVEIDDSNQAVVRAVTRYTNDASPTDSSVCPLLTVDGTATRMSLRVAAGIVPQRTTASAA EEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEEHHCCCCCCCCCCCC SDSKASAFPVSACEATVPAGAQAVSIGPRALPLPKASPQRVVILADTGCRLKTSSNTFQA CCCCCCCCCCHHHCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCEEEECCCHHHH CSDATQWPFATAAATAAAMNPDLVLHVGDYHYRENACPSDVAGCQDSPWGYGWDTWQADL HCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHH FQPAAPLLAAAPWVVVRGNHEECARAGQGWFRFLDPRAYSAARSCDDPANDTAANASEPY HCCCHHHHHCCCEEEEECCHHHHHHCCCCCEEEECCHHHHHHHCCCCCCCCCCCCCCCCE AVAIGTDTQAIVFDSAKAGTKALATTDPWFQTYQKQFSTVGTLAARPGVMSIFTNHHPIL EEEECCCCEEEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEE GFVPISGGTPLGGNAALLSVMSSLNATAYYPPGVQVALHGHVHDFQAINFSSNHPATIVA EEEECCCCCCCCCCHHHHHHHHHCCCCEECCCCCEEEEECCCEEEEEEECCCCCCEEEEE GNAGDSLDVALPDPFPSISPASGVTVGSLSHNNAFGFMVMDRQPAPATGWLFKAYTVAGK CCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHH LLTTCTQNGTSLVCDKTGFVAP HHHHHCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA