| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17547186
Identifier: 17547186
GI number: 17547186
Start: 2676265
End: 2676885
Strand: Direct
Name: 17547186
Synonym: RSc2467
Alternate gene names: NA
Gene position: 2676265-2676885 (Clockwise)
Preceding gene: 17547185
Following gene: 17547190
Centisome position: 72.01
GC content: 71.18
Gene sequence:
>621_bases ATGCTGGAAACCGCCGCGCTGGCCGCGGGCTTGTCCTGGACCAGCGGATTCCGCCTCTATCTCGCAGTCTTCGCCGCGGG CGCCCTGGCACGCGCCGGATGGCTGCACCTGCCGCCCGGCCTGCACGCCCTCGAATCCTGGTGGGTGATTGCGCTGGCCG GCGTACTGGCCATCGCGGAATTCCTCGCCGACAAGGTGCCGGGCTTCGACTCGGTCTGGGACGGCATCCACACCTTCATC CGGATTCCTGCCGGCGCCATCCTGGCAGCCGGCGCATTCGGGCAGCTCGATCCGCAGTGGATGGTCGCCGCCGGACTGGT CGGCGGCACGCTGGCCGGGGCCGCCCATGCCACCAAGGCCAGCACGCGCGCGCTGATCAACGTGTCGCCGGAACCGTTCT CGAACTGGGCGGCCTCGTTCAGTGAAGACGTGGCGGCCAGCGGCGGGCTGCTGATGGCGTTCTTTCTGCCGGTGGCGTTC CTGGTGGGGCTGGGACTCCTGCTGCTGGTCGTGCTGTGGCTGCTGCCCAAGTTGTGGCGCGGCATGCGACGGCTGCGGGA CACGGTGAGCCGGCGGACGCCCGAGCCCCCGCCCGCCCGGCCACCGCGCTCGGTGGACTGA
Upstream 100 bases:
>100_bases CCGCGCGCATCCCGGGGCCGCCTGCGCGAGCGCGTACTACACTGCCTGCATCAGCGCAGCACGCCCGCACCCTTGGCCGA CGGAACCTGCGAGGAGTCTC
Downstream 100 bases:
>100_bases CCCGGCGGCTACCGAGCACTGAGCGGCGCGCAAGAGCATCCGGACACCCGCGCCACGGCGCGGCGGGCAGCACGTGCCCA CCGCGAATGCCAGGGCACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MLETAALAAGLSWTSGFRLYLAVFAAGALARAGWLHLPPGLHALESWWVIALAGVLAIAEFLADKVPGFDSVWDGIHTFI RIPAGAILAAGAFGQLDPQWMVAAGLVGGTLAGAAHATKASTRALINVSPEPFSNWAASFSEDVAASGGLLMAFFLPVAF LVGLGLLLLVVLWLLPKLWRGMRRLRDTVSRRTPEPPPARPPRSVD
Sequences:
>Translated_206_residues MLETAALAAGLSWTSGFRLYLAVFAAGALARAGWLHLPPGLHALESWWVIALAGVLAIAEFLADKVPGFDSVWDGIHTFI RIPAGAILAAGAFGQLDPQWMVAAGLVGGTLAGAAHATKASTRALINVSPEPFSNWAASFSEDVAASGGLLMAFFLPVAF LVGLGLLLLVVLWLLPKLWRGMRRLRDTVSRRTPEPPPARPPRSVD >Mature_206_residues MLETAALAAGLSWTSGFRLYLAVFAAGALARAGWLHLPPGLHALESWWVIALAGVLAIAEFLADKVPGFDSVWDGIHTFI RIPAGAILAAGAFGQLDPQWMVAAGLVGGTLAGAAHATKASTRALINVSPEPFSNWAASFSEDVAASGGLLMAFFLPVAF LVGLGLLLLVVLWLLPKLWRGMRRLRDTVSRRTPEPPPARPPRSVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21784; Mature: 21784
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLETAALAAGLSWTSGFRLYLAVFAAGALARAGWLHLPPGLHALESWWVIALAGVLAIAE CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH FLADKVPGFDSVWDGIHTFIRIPAGAILAAGAFGQLDPQWMVAAGLVGGTLAGAAHATKA HHHHCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH STRALINVSPEPFSNWAASFSEDVAASGGLLMAFFLPVAFLVGLGLLLLVVLWLLPKLWR HHHEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GMRRLRDTVSRRTPEPPPARPPRSVD HHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MLETAALAAGLSWTSGFRLYLAVFAAGALARAGWLHLPPGLHALESWWVIALAGVLAIAE CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH FLADKVPGFDSVWDGIHTFIRIPAGAILAAGAFGQLDPQWMVAAGLVGGTLAGAAHATKA HHHHCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH STRALINVSPEPFSNWAASFSEDVAASGGLLMAFFLPVAFLVGLGLLLLVVLWLLPKLWR HHHEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GMRRLRDTVSRRTPEPPPARPPRSVD HHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA