| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is cysI1 [H]
Identifier: 17547144
GI number: 17547144
Start: 2628961
End: 2630622
Strand: Reverse
Name: cysI1 [H]
Synonym: RSc2425
Alternate gene names: 17547144
Gene position: 2630622-2628961 (Counterclockwise)
Preceding gene: 17547145
Following gene: 17547143
Centisome position: 70.78
GC content: 64.74
Gene sequence:
>1662_bases ATGTACCAATACGACGCCTACGATCATCGCCTCGTCGCCGACCGCGTCGCGCAGTTCCGCGACCAGGTGCGCCGCCGCAT CTCGGGCGAGCTGACGGAAGAGGAATTCCTGCCGCTGCGCCTGCAGAACGGCCTGTACATGCAGCGCCACGCTTACATGC TGCGCGTGGCCATTCCATATGGCCACCTGCGTGCCAAGCAACTGCGCATGCTCAGCCACATCGCCGCCGAACACGATCGC GGCTATGGCCACTTCAGCACGCGCCAGAACATTCAGTACAACTGGATCAAGCTCGAAGACGTGCCGGACATCCTGGGCAA GCTGGCTTCGGTGGAAATGCACGCCATCCAGACCTCGGGCAACTGCATCCGCAACATCACGACCGACCAGTTTGCCGGCG TGGCGCCGGATGAGTTCGTCGACCCGCGTCCGCTGGCCGAGATCCTGCGCCAGTGGTCGACCTTCATTCCCGAGTTCGCC TTCCTGCCGCGCAAGTTCAAGATCGCCGTCTCGGCCACGCGCGAAGACCGCGCGGTGACGCAACTGCACGACATCGGCGT GTACGCCTATGAAAAGGACGGCCGGACGCTGCTGCGTGTCCTGGCCGGCGGCGGCATGGGCCGTACCCCGATCCTGGGCG CGATCATCAAGGAAGATCTGCCGTGGCAGCACATGCTGTCGTACATCGAAGCGGCCATCCGCGTGTACAACCGCTATGGC CGCCGCGACAACAAGTACAAGGCGCGCATCAAGATCCTGGTGAAGGCCATCGGTGCGGAAGAATTCGCCCGCCAGGTGGA AGAGGAATGGCAGCACATCAAGGACGGCCCGTCGACCATCCCGCAGGCCGAGTTCGACCGCGTGGCGAAGGACTTCGCAC CGCCCGCGTATGAAAAGCTGGCCGACACCGACGCCGCCTACGAGAAGGCGCTGCTCGAGAACAAGGCGTTCGCGCGCTGG GTCAGCCGCAATGTGCATCCGCACCGCGTGCCGGGCTATGCGGCGGTGACGCTGTCGCTCAAGCCGGGCGTGGCCCTGCC TCCGGGGGACGCCACCGCCGAGCAGATGGCGCTGGTGGCCGACTGGTCCGAGCGCTTCGGCTTCGGCGAGCTGCGCGTGG CGCACGAGCAGAACCTGATCCTGCCGGACGTGAAGAAGCACGACCTGTTCGCGCTGTGGCAGCTGGCCAAGGAACACGGC ATGGCCACCGCCAACATCGGCCTGCTGACCGACATCATCGCCTGCCCGGGCGGCGACTTCTGCTCGCTGGCGAACGCCAA GTCGATTCCCATCGCGCAGGCCATCCAGGCGCGTTTCGACAATCTGGACTACGTGCACGACCTGGGCGAGATCTCGCTCA ACATCTCGGGCTGCATCAATTCGTGCGGCCACCACCACGTCGGCAACATCGGCATCCTGGGTGTCGACAAGGCCGACGAG GAGTGGTACCAGGTGTCGCTGGGCGGCGCGCAGGGCAACGATTCGGCGCTCGGCAAGGTGATCGGCCCGTCGTTCAAGGC CGAGGAGATGCCCGACGTGATCGAGCGCATCATCGACACCTTCGTCGCCAACCGGATCGAAGACGAGCGCTTCATCGAAA CCTACAACCGCATCGGCATGACCCCGTTCAAGGAACGCGTCTATGCCCGTGAAGCTGCCTGA
Upstream 100 bases:
>100_bases GCCGCTGCTGTGGCGGCTGAGCCGGCACCAGCAGCAAGGCAACGAACCTTTCCCCCATTTGAATCGCATGCCGGCGCAAG CCGGATCGGACTGACCAGTC
Downstream 100 bases:
>100_bases GCCCGAGGGAACGAACATGAGCAAGATCATCAAGCTGCAAGACGGCACCCCGCAGATCGTTGCCGACGAGTGGACCGTGC TGCGCGCCCCCGAGGGCGGC
Product: sulfite reductase oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 553; Mature: 553
Protein sequence:
>553_residues MYQYDAYDHRLVADRVAQFRDQVRRRISGELTEEEFLPLRLQNGLYMQRHAYMLRVAIPYGHLRAKQLRMLSHIAAEHDR GYGHFSTRQNIQYNWIKLEDVPDILGKLASVEMHAIQTSGNCIRNITTDQFAGVAPDEFVDPRPLAEILRQWSTFIPEFA FLPRKFKIAVSATREDRAVTQLHDIGVYAYEKDGRTLLRVLAGGGMGRTPILGAIIKEDLPWQHMLSYIEAAIRVYNRYG RRDNKYKARIKILVKAIGAEEFARQVEEEWQHIKDGPSTIPQAEFDRVAKDFAPPAYEKLADTDAAYEKALLENKAFARW VSRNVHPHRVPGYAAVTLSLKPGVALPPGDATAEQMALVADWSERFGFGELRVAHEQNLILPDVKKHDLFALWQLAKEHG MATANIGLLTDIIACPGGDFCSLANAKSIPIAQAIQARFDNLDYVHDLGEISLNISGCINSCGHHHVGNIGILGVDKADE EWYQVSLGGAQGNDSALGKVIGPSFKAEEMPDVIERIIDTFVANRIEDERFIETYNRIGMTPFKERVYAREAA
Sequences:
>Translated_553_residues MYQYDAYDHRLVADRVAQFRDQVRRRISGELTEEEFLPLRLQNGLYMQRHAYMLRVAIPYGHLRAKQLRMLSHIAAEHDR GYGHFSTRQNIQYNWIKLEDVPDILGKLASVEMHAIQTSGNCIRNITTDQFAGVAPDEFVDPRPLAEILRQWSTFIPEFA FLPRKFKIAVSATREDRAVTQLHDIGVYAYEKDGRTLLRVLAGGGMGRTPILGAIIKEDLPWQHMLSYIEAAIRVYNRYG RRDNKYKARIKILVKAIGAEEFARQVEEEWQHIKDGPSTIPQAEFDRVAKDFAPPAYEKLADTDAAYEKALLENKAFARW VSRNVHPHRVPGYAAVTLSLKPGVALPPGDATAEQMALVADWSERFGFGELRVAHEQNLILPDVKKHDLFALWQLAKEHG MATANIGLLTDIIACPGGDFCSLANAKSIPIAQAIQARFDNLDYVHDLGEISLNISGCINSCGHHHVGNIGILGVDKADE EWYQVSLGGAQGNDSALGKVIGPSFKAEEMPDVIERIIDTFVANRIEDERFIETYNRIGMTPFKERVYAREAA >Mature_553_residues MYQYDAYDHRLVADRVAQFRDQVRRRISGELTEEEFLPLRLQNGLYMQRHAYMLRVAIPYGHLRAKQLRMLSHIAAEHDR GYGHFSTRQNIQYNWIKLEDVPDILGKLASVEMHAIQTSGNCIRNITTDQFAGVAPDEFVDPRPLAEILRQWSTFIPEFA FLPRKFKIAVSATREDRAVTQLHDIGVYAYEKDGRTLLRVLAGGGMGRTPILGAIIKEDLPWQHMLSYIEAAIRVYNRYG RRDNKYKARIKILVKAIGAEEFARQVEEEWQHIKDGPSTIPQAEFDRVAKDFAPPAYEKLADTDAAYEKALLENKAFARW VSRNVHPHRVPGYAAVTLSLKPGVALPPGDATAEQMALVADWSERFGFGELRVAHEQNLILPDVKKHDLFALWQLAKEHG MATANIGLLTDIIACPGGDFCSLANAKSIPIAQAIQARFDNLDYVHDLGEISLNISGCINSCGHHHVGNIGILGVDKADE EWYQVSLGGAQGNDSALGKVIGPSFKAEEMPDVIERIIDTFVANRIEDERFIETYNRIGMTPFKERVYAREAA
Specific function: This Enzyme Catalyzes The 6-Electron Reduction Of Sulfite To Sulfide. This Is One Of Several Activities Required For The Biosynthesis Of L-Cysteine From Sulfate. [C]
COG id: COG0155
COG function: function code P; Sulfite reductase, beta subunit (hemoprotein)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitrite and sulfite reductase 4Fe-4S domain family [H]
Homologues:
None
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005117 - InterPro: IPR006067 - InterPro: IPR006066 [H]
Pfam domain/function: PF01077 NIR_SIR; PF03460 NIR_SIR_ferr [H]
EC number: =1.8.7.1 [H]
Molecular weight: Translated: 62377; Mature: 62377
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYQYDAYDHRLVADRVAQFRDQVRRRISGELTEEEFLPLRLQNGLYMQRHAYMLRVAIPY CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEECCCEEEECCEEEEEEECCC GHLRAKQLRMLSHIAAEHDRGYGHFSTRQNIQYNWIKLEDVPDILGKLASVEMHAIQTSG CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHEEEECCC NCIRNITTDQFAGVAPDEFVDPRPLAEILRQWSTFIPEFAFLPRKFKIAVSATREDRAVT CHHHCCCHHHHCCCCCHHCCCCCHHHHHHHHHHHHCCHHHHCCCEEEEEEECCCCHHHHH QLHDIGVYAYEKDGRTLLRVLAGGGMGRTPILGAIIKEDLPWQHMLSYIEAAIRVYNRYG HHHHCCEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC RRDNKYKARIKILVKAIGAEEFARQVEEEWQHIKDGPSTIPQAEFDRVAKDFAPPAYEKL CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHH ADTDAAYEKALLENKAFARWVSRNVHPHRVPGYAAVTLSLKPGVALPPGDATAEQMALVA HCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHH DWSERFGFGELRVAHEQNLILPDVKKHDLFALWQLAKEHGMATANIGLLTDIIACPGGDF HHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEECHHHHHHHHHCCCCCC CSLANAKSIPIAQAIQARFDNLDYVHDLGEISLNISGCINSCGHHHVGNIGILGVDKADE CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHEEEHHHHHHCCCCCCCCCEEEEECCCCCC EWYQVSLGGAQGNDSALGKVIGPSFKAEEMPDVIERIIDTFVANRIEDERFIETYNRIGM CEEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC TPFKERVYAREAA CHHHHHHHHHCCC >Mature Secondary Structure MYQYDAYDHRLVADRVAQFRDQVRRRISGELTEEEFLPLRLQNGLYMQRHAYMLRVAIPY CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEECCCEEEECCEEEEEEECCC GHLRAKQLRMLSHIAAEHDRGYGHFSTRQNIQYNWIKLEDVPDILGKLASVEMHAIQTSG CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHEEEECCC NCIRNITTDQFAGVAPDEFVDPRPLAEILRQWSTFIPEFAFLPRKFKIAVSATREDRAVT CHHHCCCHHHHCCCCCHHCCCCCHHHHHHHHHHHHCCHHHHCCCEEEEEEECCCCHHHHH QLHDIGVYAYEKDGRTLLRVLAGGGMGRTPILGAIIKEDLPWQHMLSYIEAAIRVYNRYG HHHHCCEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC RRDNKYKARIKILVKAIGAEEFARQVEEEWQHIKDGPSTIPQAEFDRVAKDFAPPAYEKL CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHH ADTDAAYEKALLENKAFARWVSRNVHPHRVPGYAAVTLSLKPGVALPPGDATAEQMALVA HCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHH DWSERFGFGELRVAHEQNLILPDVKKHDLFALWQLAKEHGMATANIGLLTDIIACPGGDF HHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEECHHHHHHHHHCCCCCC CSLANAKSIPIAQAIQARFDNLDYVHDLGEISLNISGCINSCGHHHVGNIGILGVDKADE CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHEEEHHHHHHCCCCCCCCCEEEEECCCCCC EWYQVSLGGAQGNDSALGKVIGPSFKAEEMPDVIERIIDTFVANRIEDERFIETYNRIGM CEEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC TPFKERVYAREAA CHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA