| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is cysD [H]
Identifier: 17547141
GI number: 17547141
Start: 2626635
End: 2627585
Strand: Reverse
Name: cysD [H]
Synonym: RSc2422
Alternate gene names: 17547141
Gene position: 2627585-2626635 (Counterclockwise)
Preceding gene: 17547142
Following gene: 17547140
Centisome position: 70.7
GC content: 66.98
Gene sequence:
>951_bases ATGGGAGTGCTGAACGAAATCCCCGGCACGGCGCTGACGCCGATGCAGAACGACCACCTCGACTGGCTGGAAGCCGAGTC GATCTACATCATCCGCGAGGTGGTGGCCGAGTGCCGCAACCCGGCGCTGCTGTTCTCCGGCGGCAAGGACTCGATCGTCA TGCTGCACCTGGCGCTCAAGGCCTTCCGCCTGGGCGATCGCAAGATCGAGCTGCCGTTCCCGCTGGTGCACATCGATACG GGCCACAACTACCCGGAAGTGATCGCCTTCCGTGACCAGCGTGTCGCCGAACTGGGCGCGCGCCTGGTGGTCGGCCACGT GGAAGATTCCATCAAGCGCGGCACCGTGCGCCTGCGTCGTGAAACCGACTCGCGCAACGCCGCGCAGGCCGTCACGCTGC TGGAGACCATCGAGTCGCACGGCTTCGACGCGCTGATGGGCGGCGCCCGCCGCGACGAAGAGAAGGCCCGCGCCAAGGAG CGCATCTTCTCGTTCCGCGACGAGTTCGGCCAGTGGGACCCGAAGGCCCAGCGCCCGGAGCTCTGGAGCCTGTACAACGC CCGCATGGCACGGGGCGAGCAGATGCGCGTGTTCCCGATCTCCAACTGGACGGAGCTCGACGTGTGGCAGTACATCGCCC GCGAGAACCTGGCGCTGCCGCCGATCTACTACGCGCATCAGCGTGAAGTCGTGCGCAAGAACGGCCTGCTGGTGCCGGTC ACGCCCATCACGCCCAAGGCCGACGGCGACGTGAGCGAAGTCCTGTCGGTGCGCTTCCGCACCGTCGGCGACATCAGCTG CACCTGCCCGGTGGCAAGCACCGCCGCCACGCCGGCCGAGATCATCGCCGAGACGGCCGTGACCGAGATCACCGAACGCG GCGCCACGCGCATGGACGACCAGACCAGCGAGGCGTCGATGGAAAAGCGCAAGAAGGAAGGGTATTTCTGA
Upstream 100 bases:
>100_bases GAGGACGTGCGCGCCGGCCGCTGGTGGTGGGAATCGCGCGATAGCAAGGAATGCGGTTTGCATGCGACGAACCTGTCGCA CAAGAGCTAAGGATAGGAAG
Downstream 100 bases:
>100_bases TCATGACGAACCAAGCATCCCATCAGGGCCTGTTGCGCTTCATCACCGCCGGTTCGGTCGACGACGGCAAGAGCACGCTG ATCGGTCGTCTGCTGTACGA
Product: sulfate adenylyltransferase subunit 2
Products: NA
Alternate protein names: ATP-sulfurylase small subunit; Sulfate adenylate transferase; SAT [H]
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MGVLNEIPGTALTPMQNDHLDWLEAESIYIIREVVAECRNPALLFSGGKDSIVMLHLALKAFRLGDRKIELPFPLVHIDT GHNYPEVIAFRDQRVAELGARLVVGHVEDSIKRGTVRLRRETDSRNAAQAVTLLETIESHGFDALMGGARRDEEKARAKE RIFSFRDEFGQWDPKAQRPELWSLYNARMARGEQMRVFPISNWTELDVWQYIARENLALPPIYYAHQREVVRKNGLLVPV TPITPKADGDVSEVLSVRFRTVGDISCTCPVASTAATPAEIIAETAVTEITERGATRMDDQTSEASMEKRKKEGYF
Sequences:
>Translated_316_residues MGVLNEIPGTALTPMQNDHLDWLEAESIYIIREVVAECRNPALLFSGGKDSIVMLHLALKAFRLGDRKIELPFPLVHIDT GHNYPEVIAFRDQRVAELGARLVVGHVEDSIKRGTVRLRRETDSRNAAQAVTLLETIESHGFDALMGGARRDEEKARAKE RIFSFRDEFGQWDPKAQRPELWSLYNARMARGEQMRVFPISNWTELDVWQYIARENLALPPIYYAHQREVVRKNGLLVPV TPITPKADGDVSEVLSVRFRTVGDISCTCPVASTAATPAEIIAETAVTEITERGATRMDDQTSEASMEKRKKEGYF >Mature_315_residues GVLNEIPGTALTPMQNDHLDWLEAESIYIIREVVAECRNPALLFSGGKDSIVMLHLALKAFRLGDRKIELPFPLVHIDTG HNYPEVIAFRDQRVAELGARLVVGHVEDSIKRGTVRLRRETDSRNAAQAVTLLETIESHGFDALMGGARRDEEKARAKER IFSFRDEFGQWDPKAQRPELWSLYNARMARGEQMRVFPISNWTELDVWQYIARENLALPPIYYAHQREVVRKNGLLVPVT PITPKADGDVSEVLSVRFRTVGDISCTCPVASTAATPAEIIAETAVTEITERGATRMDDQTSEASMEKRKKEGYF
Specific function: First step in the sulfate activation pathway. This reaction occurs early in the reductive branch of the cysteine biosynthetic pathway. [C]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789109, Length=303, Percent_Identity=46.8646864686469, Blast_Score=258, Evalue=2e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002500 - InterPro: IPR014729 - InterPro: IPR011784 [H]
Pfam domain/function: PF01507 PAPS_reduct [H]
EC number: =2.7.7.4 [H]
Molecular weight: Translated: 35633; Mature: 35502
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVLNEIPGTALTPMQNDHLDWLEAESIYIIREVVAECRNPALLFSGGKDSIVMLHLALK CCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHH AFRLGDRKIELPFPLVHIDTGHNYPEVIAFRDQRVAELGARLVVGHVEDSIKRGTVRLRR HHHCCCEEEECCCCEEEEECCCCCCCEEEECHHHHHHHCHHEEEEHHHHHHHHCCEEEEE ETDSRNAAQAVTLLETIESHGFDALMGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPE CCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCH LWSLYNARMARGEQMRVFPISNWTELDVWQYIARENLALPPIYYAHQREVVRKNGLLVPV HHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEE TPITPKADGDVSEVLSVRFRTVGDISCTCPVASTAATPAEIIAETAVTEITERGATRMDD CCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC QTSEASMEKRKKEGYF CHHHHHHHHHHHCCCC >Mature Secondary Structure GVLNEIPGTALTPMQNDHLDWLEAESIYIIREVVAECRNPALLFSGGKDSIVMLHLALK CCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHH AFRLGDRKIELPFPLVHIDTGHNYPEVIAFRDQRVAELGARLVVGHVEDSIKRGTVRLRR HHHCCCEEEECCCCEEEEECCCCCCCEEEECHHHHHHHCHHEEEEHHHHHHHHCCEEEEE ETDSRNAAQAVTLLETIESHGFDALMGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPE CCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCH LWSLYNARMARGEQMRVFPISNWTELDVWQYIARENLALPPIYYAHQREVVRKNGLLVPV HHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEE TPITPKADGDVSEVLSVRFRTVGDISCTCPVASTAATPAEIIAETAVTEITERGATRMDD CCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC QTSEASMEKRKKEGYF CHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]