| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17547093
Identifier: 17547093
GI number: 17547093
Start: 2578469
End: 2578726
Strand: Reverse
Name: 17547093
Synonym: RSc2374
Alternate gene names: NA
Gene position: 2578726-2578469 (Counterclockwise)
Preceding gene: 17547094
Following gene: 17547092
Centisome position: 69.39
GC content: 72.87
Gene sequence:
>258_bases ATGGCCATGCCAGACCCGAAGACGAATCCCCACGCCCCGGCCCAGGCTGACACCGTCGATGCCGGGCCCGCGCGCCGCCG TTTCCTGATGGGCGCCGCCGTTGCCGCGGCGGCGGCCGGCGCGGCAGCCACTACGGGCCGCCTGGCGCCGCAGCAGGCTT CCGGCGCCGCCGAGCCTGCTGAGCCCGCCGATGACAAGGCCACCGGCTATCGGTTGACCGAGCACATCCGCAAGTACTAC CGCACCACGTGGATCTGA
Upstream 100 bases:
>100_bases TTCAGGGCTAACAGGCATGGTTTTCTAGGACCATTAATCCTAGAATGTGTCGATCAATTCCTATTTCGTTCGGTCATCGG TTCGGTTGAACCGAGGGAGC
Downstream 100 bases:
>100_bases GGCCAGCCTCCCGGTTCCCGCGCGATTCCCGTTCCTCCCCTCCCAGGTGACACCATGCTTCTGACCCGCAAACCGGCGGC GCAGGATGCCAAGACCGGGC
Product: transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MAMPDPKTNPHAPAQADTVDAGPARRRFLMGAAVAAAAAGAAATTGRLAPQQASGAAEPAEPADDKATGYRLTEHIRKYY RTTWI
Sequences:
>Translated_85_residues MAMPDPKTNPHAPAQADTVDAGPARRRFLMGAAVAAAAAGAAATTGRLAPQQASGAAEPAEPADDKATGYRLTEHIRKYY RTTWI >Mature_84_residues AMPDPKTNPHAPAQADTVDAGPARRRFLMGAAVAAAAAGAAATTGRLAPQQASGAAEPAEPADDKATGYRLTEHIRKYYR TTWI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8862; Mature: 8731
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMPDPKTNPHAPAQADTVDAGPARRRFLMGAAVAAAAAGAAATTGRLAPQQASGAAEPA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC EPADDKATGYRLTEHIRKYYRTTWI CCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure AMPDPKTNPHAPAQADTVDAGPARRRFLMGAAVAAAAAGAAATTGRLAPQQASGAAEPA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC EPADDKATGYRLTEHIRKYYRTTWI CCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA