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The map label for this gene is 17547073

Identifier: 17547073

GI number: 17547073

Start: 2553115

End: 2553642

Strand: Direct

Name: 17547073

Synonym: RSc2354

Alternate gene names: NA

Gene position: 2553115-2553642 (Clockwise)

Preceding gene: 17547072

Following gene: 17547077

Centisome position: 68.7

GC content: 71.02

Gene sequence:

>528_bases
ATGACATCGTCCGAAGCGTCCGTCCCGGTGTGGGACAAGGTCGTCCGCCTCACGCACTGGGGCGTGGCGGCCCTGGTGCT
GTGGGAACTGTACGAGGATTCCGGCGGTCCGCTGCACCGCGGCCTCGGCTATGCGGCGGTGGCGCTGGTGGCGGTGCGCC
TGGCGTGGGGCTGGATCGGCAGCGAGGCGGCACGGTTCCGGACCTGGGCGCCCCGCCCGGCCGAGGTGGTCCGGTATGTC
AAGGCGCTCTGCGCCGGCAGGGCGCCGCGCCATCTCAGCCACAACCCGGCCGGCGCCGTGGTGATGTTCGCCATGTGGAC
GCTCATCCTCGCGCTGGGCGCAACGGGATGGCTGTCCCGGCTGGACGCCTTCTGGGGCGAAGACTGGCCCACGGACCTGC
ATGGCCTGCTGGCCGATGCGCTGGCCGTGCTGATCGTGATCCACGTGGCGGCGGCCTTTGCGATGAGCGTGCTCCACAGG
GAAAACCTCATCCGCGCGATGCTCACCGGCAGGAAGCGCCGCGACTGA

Upstream 100 bases:

>100_bases
ACGGCAAGAAGGTCGAGATCTACTACGACACCAAGACGCTGGATGTCGTGAAGTCCGAGATCGAGAAGTAAATCGCTCCC
GCCTTGCCTGCACTGCCGCC

Downstream 100 bases:

>100_bases
CGGACGCGGCGCGCCTCCCCTGCCCTCCGGATGCACCCTGCTTACTTGACCGCCAGCAGCGCGCTCTGCCGGAAGTGGCG
CTGCGCCTCTTCCTGGCGGT

Product: transmembrane hydrogenase cytochrome B- type subunit

Products: NA

Alternate protein names: Cytochrome; Nickel-Dependent Hydrogenase Cytochrome B-Type Subunit; Cytochrome B Oxidoreductase Protein

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MTSSEASVPVWDKVVRLTHWGVAALVLWELYEDSGGPLHRGLGYAAVALVAVRLAWGWIGSEAARFRTWAPRPAEVVRYV
KALCAGRAPRHLSHNPAGAVVMFAMWTLILALGATGWLSRLDAFWGEDWPTDLHGLLADALAVLIVIHVAAAFAMSVLHR
ENLIRAMLTGRKRRD

Sequences:

>Translated_175_residues
MTSSEASVPVWDKVVRLTHWGVAALVLWELYEDSGGPLHRGLGYAAVALVAVRLAWGWIGSEAARFRTWAPRPAEVVRYV
KALCAGRAPRHLSHNPAGAVVMFAMWTLILALGATGWLSRLDAFWGEDWPTDLHGLLADALAVLIVIHVAAAFAMSVLHR
ENLIRAMLTGRKRRD
>Mature_174_residues
TSSEASVPVWDKVVRLTHWGVAALVLWELYEDSGGPLHRGLGYAAVALVAVRLAWGWIGSEAARFRTWAPRPAEVVRYVK
ALCAGRAPRHLSHNPAGAVVMFAMWTLILALGATGWLSRLDAFWGEDWPTDLHGLLADALAVLIVIHVAAAFAMSVLHRE
NLIRAMLTGRKRRD

Specific function: Unknown

COG id: COG3658

COG function: function code C; Cytochrome b

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19240; Mature: 19108

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSEASVPVWDKVVRLTHWGVAALVLWELYEDSGGPLHRGLGYAAVALVAVRLAWGWIG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SEAARFRTWAPRPAEVVRYVKALCAGRAPRHLSHNPAGAVVMFAMWTLILALGATGWLSR
HHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH
LDAFWGEDWPTDLHGLLADALAVLIVIHVAAAFAMSVLHRENLIRAMLTGRKRRD
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TSSEASVPVWDKVVRLTHWGVAALVLWELYEDSGGPLHRGLGYAAVALVAVRLAWGWIG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SEAARFRTWAPRPAEVVRYVKALCAGRAPRHLSHNPAGAVVMFAMWTLILALGATGWLSR
HHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH
LDAFWGEDWPTDLHGLLADALAVLIVIHVAAAFAMSVLHRENLIRAMLTGRKRRD
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA