| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is glnM [H]
Identifier: 17546977
GI number: 17546977
Start: 2450365
End: 2451060
Strand: Direct
Name: glnM [H]
Synonym: RSc2258
Alternate gene names: 17546977
Gene position: 2450365-2451060 (Clockwise)
Preceding gene: 17546976
Following gene: 17546978
Centisome position: 65.93
GC content: 66.52
Gene sequence:
>696_bases ATGCCCAATTTCGATCTGTCGATGCTGCTGTCGGGGCAGTATCACCAGTGGCTCGTCACCGGTTTCCAGCTGTCGATCAA GCTGACCGCGCTGGCCTTCGTGCTGGCCCTGCCGCTGGCCATCGCGGTGGCGCTGCTGCGCCTGGCGCCGGCGGCGCCGC TGCGGGCGGTCGGCCAGGCCTATGTCGAGGCCATCCGCAACGTGCCGCTGCTCGCCCACATGCTGTTCTGGTACTTCGGC GCGCCGCAGCTGCTGCCGATGTCCGTCAAGACCTGGCTCTACAACCTCAATTACGAAGCGGCGAGCGCGGTCATCGCGCT CGTGCTCTATACGGCCGCCTACATGGCGGAGGACATCCGCAGCGGCCTGCGCTCGATCCCGAAGGAGCAGTTCGAGGCCA GCCGCGCGCTGGGCCTGAGCTTCCTGCAGGCCATGCGGCTGGTGGTGCTGCCGCAATCGCTGCGCGTGACCGTGCCGCCG CTGGTCAGCCAGACGCTGAACCTGTGGAAGAACTCCAGCATCGCCATGGTGATCGGCGTGGCGGAGCTGATGTACCAGGC GCAGCAGGTGGAAAGCGCCACCTTCCGCGGCTTCGAGGCGTTCGCCTTCGCCACGGCGGCCTATCTGTCCATTTCGATGG CGATCACGGTGTTTTCGGCGTGGTACCAGCATCGCTACCCCGTGCGGACCCTGTGA
Upstream 100 bases:
>100_bases CCAAGATGAACTTCGGCCCGCGCAGCTTCAAGCTGTCGACCGACAAGATCGACTGAGTACCCGCCGCGCCGCCCGGACGC CCTCCGGGCGGCGGAACGCC
Downstream 100 bases:
>100_bases CCATGCTCGAACTCATCCAGACCTACGGCCTCTACTACCTGATTGGACAGTATCCGAACGGCCCCCTGGGCGGCCTGGCG CTCACGCTGCTGCTGGCCGC
Product: amino acid ABC transporter transmembrane protein
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MPNFDLSMLLSGQYHQWLVTGFQLSIKLTALAFVLALPLAIAVALLRLAPAAPLRAVGQAYVEAIRNVPLLAHMLFWYFG APQLLPMSVKTWLYNLNYEAASAVIALVLYTAAYMAEDIRSGLRSIPKEQFEASRALGLSFLQAMRLVVLPQSLRVTVPP LVSQTLNLWKNSSIAMVIGVAELMYQAQQVESATFRGFEAFAFATAAYLSISMAITVFSAWYQHRYPVRTL
Sequences:
>Translated_231_residues MPNFDLSMLLSGQYHQWLVTGFQLSIKLTALAFVLALPLAIAVALLRLAPAAPLRAVGQAYVEAIRNVPLLAHMLFWYFG APQLLPMSVKTWLYNLNYEAASAVIALVLYTAAYMAEDIRSGLRSIPKEQFEASRALGLSFLQAMRLVVLPQSLRVTVPP LVSQTLNLWKNSSIAMVIGVAELMYQAQQVESATFRGFEAFAFATAAYLSISMAITVFSAWYQHRYPVRTL >Mature_230_residues PNFDLSMLLSGQYHQWLVTGFQLSIKLTALAFVLALPLAIAVALLRLAPAAPLRAVGQAYVEAIRNVPLLAHMLFWYFGA PQLLPMSVKTWLYNLNYEAASAVIALVLYTAAYMAEDIRSGLRSIPKEQFEASRALGLSFLQAMRLVVLPQSLRVTVPPL VSQTLNLWKNSSIAMVIGVAELMYQAQQVESATFRGFEAFAFATAAYLSISMAITVFSAWYQHRYPVRTL
Specific function: Part of the ABC transporter complex glnHMPQ involved in glutamine transport. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786874, Length=204, Percent_Identity=36.2745098039216, Blast_Score=133, Evalue=9e-33, Organism=Escherichia coli, GI1788226, Length=209, Percent_Identity=34.9282296650718, Blast_Score=108, Evalue=2e-25, Organism=Escherichia coli, GI1786873, Length=213, Percent_Identity=29.5774647887324, Blast_Score=104, Evalue=4e-24, Organism=Escherichia coli, GI48994930, Length=209, Percent_Identity=36.3636363636364, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI87082239, Length=219, Percent_Identity=29.2237442922374, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI1787030, Length=200, Percent_Identity=30.5, Blast_Score=92, Evalue=2e-20, Organism=Escherichia coli, GI1787087, Length=221, Percent_Identity=30.7692307692308, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1788645, Length=218, Percent_Identity=28.4403669724771, Blast_Score=83, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 25637; Mature: 25505
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNFDLSMLLSGQYHQWLVTGFQLSIKLTALAFVLALPLAIAVALLRLAPAAPLRAVGQA CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH YVEAIRNVPLLAHMLFWYFGAPQLLPMSVKTWLYNLNYEAASAVIALVLYTAAYMAEDIR HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH SGLRSIPKEQFEASRALGLSFLQAMRLVVLPQSLRVTVPPLVSQTLNLWKNSSIAMVIGV HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCEECCHHHHHHHHHHCCCCHHHHHHH AELMYQAQQVESATFRGFEAFAFATAAYLSISMAITVFSAWYQHRYPVRTL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PNFDLSMLLSGQYHQWLVTGFQLSIKLTALAFVLALPLAIAVALLRLAPAAPLRAVGQA CCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH YVEAIRNVPLLAHMLFWYFGAPQLLPMSVKTWLYNLNYEAASAVIALVLYTAAYMAEDIR HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH SGLRSIPKEQFEASRALGLSFLQAMRLVVLPQSLRVTVPPLVSQTLNLWKNSSIAMVIGV HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCEECCHHHHHHHHHHCCCCHHHHHHH AELMYQAQQVESATFRGFEAFAFATAAYLSISMAITVFSAWYQHRYPVRTL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7551042; 9384377 [H]