| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17546953
Identifier: 17546953
GI number: 17546953
Start: 2423910
End: 2424707
Strand: Direct
Name: 17546953
Synonym: RSc2234
Alternate gene names: NA
Gene position: 2423910-2424707 (Clockwise)
Preceding gene: 17546952
Following gene: 17546955
Centisome position: 65.22
GC content: 65.29
Gene sequence:
>798_bases ATGCAACTGATTGAAGTCTCCGGCAAGCAGGGCTACGTCTGGCTGCGCCAGGGTGCGTGGCTGTTCCGCAAGAACCCGAT CGGGTTCCTGCTGCTGCTGTTCATCTACCTGTTTTCCGTCAACCTGCTGATGGTGCTGCTGCCGCCCATCGGCGTGGTCG CCATCCTGCTGGCCAATCCGGCCATCTTCGTGGGCTTCATGTCGGCCTGCCGCGATACCGTGGCGGGCAAGCGCATCGGC CCGGCATCGCTGGTCGCCGGCTTCCGGGCCTATGGCAAGGACGCGCTGCGCGGCCTGCTGCGCCTGGGCGCGCTGTACTC GGTGCTGGTGCTGATCGTCAGCGGCCTGCTGATGACGATGGTCGATGTCGACACGCTGACGACGATACTGAGCGACAAGC CGCTCACCACCGACGCCATCCGCGAGTTCTACCTGGCCATGGTGATGGGCTCGGTGCTGTATATCCCGGTGGCGGTGCTG TTCTGGTTTTCGCCGCTGCTGGTGGCGTGGCACGGCATTCCGGTCGGCAAGGCGCTGTTCTTCAGCTGGATCGCGGTCTG GCGCAACCGCGCGGCGTTCATCCTGTATGGCGTGCTGTTCGCGGTGCTGCTGATCGCGGTGCCGCTGTTCATCGATGCGC TGTTCGCCTCGGGCGGCGCCAACAACATCGCTCCGCTGATCGCCACGCCGTACCGGATCCTGGTGATGGCGGTGCTGTAC TGCTCGTTCTACGCCACCTATCGGGGCTGCTTCAACGTGACGCAGGCCGCCGGCCAGACCACCGACACGGCGGCCTGA
Upstream 100 bases:
>100_bases GCGACGCCGAACTGCTGCAGCCGCATGATCCGACCCACTTCGAGCGCGTGCTGCGCGAACGGGTGCGCGCCGAGGGGCTG ACATTGGATATTCCCGAACC
Downstream 100 bases:
>100_bases GCGTCCGGCCCGCAGGACACGGGCCCGGTCAGGTCAGTTGATCGGGTCCAGCTTGGCGATGCCCAGCGCCAGCACCTTCA CGCCGTGGCGGCTGAACTTG
Product: hypothetical protein
Products: NA
Alternate protein names: Facilitator Superfamily Transporter
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MQLIEVSGKQGYVWLRQGAWLFRKNPIGFLLLLFIYLFSVNLLMVLLPPIGVVAILLANPAIFVGFMSACRDTVAGKRIG PASLVAGFRAYGKDALRGLLRLGALYSVLVLIVSGLLMTMVDVDTLTTILSDKPLTTDAIREFYLAMVMGSVLYIPVAVL FWFSPLLVAWHGIPVGKALFFSWIAVWRNRAAFILYGVLFAVLLIAVPLFIDALFASGGANNIAPLIATPYRILVMAVLY CSFYATYRGCFNVTQAAGQTTDTAA
Sequences:
>Translated_265_residues MQLIEVSGKQGYVWLRQGAWLFRKNPIGFLLLLFIYLFSVNLLMVLLPPIGVVAILLANPAIFVGFMSACRDTVAGKRIG PASLVAGFRAYGKDALRGLLRLGALYSVLVLIVSGLLMTMVDVDTLTTILSDKPLTTDAIREFYLAMVMGSVLYIPVAVL FWFSPLLVAWHGIPVGKALFFSWIAVWRNRAAFILYGVLFAVLLIAVPLFIDALFASGGANNIAPLIATPYRILVMAVLY CSFYATYRGCFNVTQAAGQTTDTAA >Mature_265_residues MQLIEVSGKQGYVWLRQGAWLFRKNPIGFLLLLFIYLFSVNLLMVLLPPIGVVAILLANPAIFVGFMSACRDTVAGKRIG PASLVAGFRAYGKDALRGLLRLGALYSVLVLIVSGLLMTMVDVDTLTTILSDKPLTTDAIREFYLAMVMGSVLYIPVAVL FWFSPLLVAWHGIPVGKALFFSWIAVWRNRAAFILYGVLFAVLLIAVPLFIDALFASGGANNIAPLIATPYRILVMAVLY CSFYATYRGCFNVTQAAGQTTDTAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28914; Mature: 28914
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLIEVSGKQGYVWLRQGAWLFRKNPIGFLLLLFIYLFSVNLLMVLLPPIGVVAILLANP CCEEEECCCCCEEEEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH AIFVGFMSACRDTVAGKRIGPASLVAGFRAYGKDALRGLLRLGALYSVLVLIVSGLLMTM HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDVDTLTTILSDKPLTTDAIREFYLAMVMGSVLYIPVAVLFWFSPLLVAWHGIPVGKALF HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH FSWIAVWRNRAAFILYGVLFAVLLIAVPLFIDALFASGGANNIAPLIATPYRILVMAVLY HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH CSFYATYRGCFNVTQAAGQTTDTAA HHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MQLIEVSGKQGYVWLRQGAWLFRKNPIGFLLLLFIYLFSVNLLMVLLPPIGVVAILLANP CCEEEECCCCCEEEEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH AIFVGFMSACRDTVAGKRIGPASLVAGFRAYGKDALRGLLRLGALYSVLVLIVSGLLMTM HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDVDTLTTILSDKPLTTDAIREFYLAMVMGSVLYIPVAVLFWFSPLLVAWHGIPVGKALF HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH FSWIAVWRNRAAFILYGVLFAVLLIAVPLFIDALFASGGANNIAPLIATPYRILVMAVLY HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH CSFYATYRGCFNVTQAAGQTTDTAA HHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA