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The map label for this gene is rfaL [C]

Identifier: 17546923

GI number: 17546923

Start: 2385606

End: 2386913

Strand: Reverse

Name: rfaL [C]

Synonym: RSc2204

Alternate gene names: 17546923

Gene position: 2386913-2385606 (Counterclockwise)

Preceding gene: 17546924

Following gene: 17546922

Centisome position: 64.23

GC content: 71.25

Gene sequence:

>1308_bases
ATGATGAACTGGTCCGACAAGCATTCCGTCCGCGCCGACCGGTGGTACGCGCCGCTGGCGGTGTTTCTGCTGATCTATCC
CGTGCTGACGGTGCTCAAGCAGGGCAGCGCCAGCGCGCTGCTGATTGCCGCCGGCGTCCTCTCGCTCGGCGCCGGGGTGG
CCGTCCGCCGCGCGCTGTCCGGGCCGGCCACGCCGGAGGGGGCCGACCGGCTGGTTCGGCTGACGGGCTGGGCCCTGTGC
ATGCCGCTGGCCGCCGTGATCCTGAGCGAGGTCTGGCATGGGCAACTGCGCTGGAACGCCTTCGATGCGCCCGCGCGCTT
TCTGGCGGCGGTCCCGCTGTTCCTGCTGCTGCGCCGGGCGCCGCTGCGCGCGCTGCGCTGGGCCGACGGGTCGTTCGCCG
CGGGGGCGCTGGCGGCGCTGGGCGTCGGCCTGTGGGCGGCGCGCGACTGGGGCGAGGGCCGGATGGGCAGCGCGTTCCTG
AATCCGATCCACTTTGGTGACATCGCGCTGATCCTGGGCGTGCTGTCCGCGCTGTCGATCAACTGGTGGCGCAAGGATCC
GCTCGCCGTGCGGCTGCTGAAGGTCGGCGGCCTGCTGGCCGGCCTGGTCGCTTCGCTGCTGACCGGCTCCCGGGGCGGAT
GGGTGGCCCTGCCGTTCATCTTGTTGCTGGTGGCGGTCGCGCGCGGCCGTGATAAGCCGGCGCGGTGGCGGGTGCTGGTG
CCCGCCGTGGCCGTGCTCGGCGTGGTCGTGCTGTACGCCGTGTCCGGCACGATCCACGAGCGGATCCACATGGTGTGGGT
GGACCTGGCCCAGTATGCGCAGGGCCAGAAGGACACCTCCATCGGGATCCGGCTGCAGATCTACCAGGCCGCGCTGATGC
TGATCCCGAAGCACCCGATCTTCGGCCTGGGGCCGGGCGGGTTTGCCGACAGCCTGCAGGCGCTGGTCGATGCCGGCCGG
ATGAGCGCCACCGCCGCGCAACTGGGCCGCGGCGAGGCGCACAACCAGCTGCTCGCCTACACGGCCAACTTCGGCCTCGT
GGGCGGCTTGTCGATCGTGGCGATCCATCTGGTGCCGGGCCTGCTGTGCTGGCGCTGCCTGAAGGCGGCGGCCGCACCGA
TGCGCCGGGCCGCGCTGATGGGAGCGGTCTTCGCGCTGGCGTTTTTCGTCTTTGGCCTGACGGTCGAGATCTTCACCCTG
AAGATGACGGCATCCTTCTACGCGGCCGTCATCGCCAGCCTGGCGGGCATCGCCTCGCACACCGGTCCTGCGTCCGAGGC
AGGCACGTCTTCCCTTACCGAGCGTTGA

Upstream 100 bases:

>100_bases
CGCGGGCCCGCCAAACCGGCAACGTATACTCGCCAGCCTGATCGCGCCGCCGGCACCGGACGGAACGCCTGGGCGGCGCG
CGGGGGAGCCGCATACAACG

Downstream 100 bases:

>100_bases
GCGCGATGTTCAGTATCCTGATCCCGACCTGGAACAACCTGCCGTATCTGCAGCTGTGCATCGAGAGCATCCGGCGCCAT
TCCGCGTTCGAGCACGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MMNWSDKHSVRADRWYAPLAVFLLIYPVLTVLKQGSASALLIAAGVLSLGAGVAVRRALSGPATPEGADRLVRLTGWALC
MPLAAVILSEVWHGQLRWNAFDAPARFLAAVPLFLLLRRAPLRALRWADGSFAAGALAALGVGLWAARDWGEGRMGSAFL
NPIHFGDIALILGVLSALSINWWRKDPLAVRLLKVGGLLAGLVASLLTGSRGGWVALPFILLLVAVARGRDKPARWRVLV
PAVAVLGVVVLYAVSGTIHERIHMVWVDLAQYAQGQKDTSIGIRLQIYQAALMLIPKHPIFGLGPGGFADSLQALVDAGR
MSATAAQLGRGEAHNQLLAYTANFGLVGGLSIVAIHLVPGLLCWRCLKAAAAPMRRAALMGAVFALAFFVFGLTVEIFTL
KMTASFYAAVIASLAGIASHTGPASEAGTSSLTER

Sequences:

>Translated_435_residues
MMNWSDKHSVRADRWYAPLAVFLLIYPVLTVLKQGSASALLIAAGVLSLGAGVAVRRALSGPATPEGADRLVRLTGWALC
MPLAAVILSEVWHGQLRWNAFDAPARFLAAVPLFLLLRRAPLRALRWADGSFAAGALAALGVGLWAARDWGEGRMGSAFL
NPIHFGDIALILGVLSALSINWWRKDPLAVRLLKVGGLLAGLVASLLTGSRGGWVALPFILLLVAVARGRDKPARWRVLV
PAVAVLGVVVLYAVSGTIHERIHMVWVDLAQYAQGQKDTSIGIRLQIYQAALMLIPKHPIFGLGPGGFADSLQALVDAGR
MSATAAQLGRGEAHNQLLAYTANFGLVGGLSIVAIHLVPGLLCWRCLKAAAAPMRRAALMGAVFALAFFVFGLTVEIFTL
KMTASFYAAVIASLAGIASHTGPASEAGTSSLTER
>Mature_435_residues
MMNWSDKHSVRADRWYAPLAVFLLIYPVLTVLKQGSASALLIAAGVLSLGAGVAVRRALSGPATPEGADRLVRLTGWALC
MPLAAVILSEVWHGQLRWNAFDAPARFLAAVPLFLLLRRAPLRALRWADGSFAAGALAALGVGLWAARDWGEGRMGSAFL
NPIHFGDIALILGVLSALSINWWRKDPLAVRLLKVGGLLAGLVASLLTGSRGGWVALPFILLLVAVARGRDKPARWRVLV
PAVAVLGVVVLYAVSGTIHERIHMVWVDLAQYAQGQKDTSIGIRLQIYQAALMLIPKHPIFGLGPGGFADSLQALVDAGR
MSATAAQLGRGEAHNQLLAYTANFGLVGGLSIVAIHLVPGLLCWRCLKAAAAPMRRAALMGAVFALAFFVFGLTVEIFTL
KMTASFYAAVIASLAGIASHTGPASEAGTSSLTER

Specific function: Adds The O-Antigen On The Glucose Group Of Lps. [C]

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007016 [H]

Pfam domain/function: PF04932 Wzy_C [H]

EC number: NA

Molecular weight: Translated: 46050; Mature: 46050

Theoretical pI: Translated: 11.05; Mature: 11.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNWSDKHSVRADRWYAPLAVFLLIYPVLTVLKQGSASALLIAAGVLSLGAGVAVRRALS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHC
GPATPEGADRLVRLTGWALCMPLAAVILSEVWHGQLRWNAFDAPARFLAAVPLFLLLRRA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHC
PLRALRWADGSFAAGALAALGVGLWAARDWGEGRMGSAFLNPIHFGDIALILGVLSALSI
HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHC
NWWRKDPLAVRLLKVGGLLAGLVASLLTGSRGGWVALPFILLLVAVARGRDKPARWRVLV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHH
PAVAVLGVVVLYAVSGTIHERIHMVWVDLAQYAQGQKDTSIGIRLQIYQAALMLIPKHPI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCCCCCC
FGLGPGGFADSLQALVDAGRMSATAAQLGRGEAHNQLLAYTANFGLVGGLSIVAIHLVPG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
LLCWRCLKAAAAPMRRAALMGAVFALAFFVFGLTVEIFTLKMTASFYAAVIASLAGIASH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TGPASEAGTSSLTER
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MMNWSDKHSVRADRWYAPLAVFLLIYPVLTVLKQGSASALLIAAGVLSLGAGVAVRRALS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHC
GPATPEGADRLVRLTGWALCMPLAAVILSEVWHGQLRWNAFDAPARFLAAVPLFLLLRRA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHC
PLRALRWADGSFAAGALAALGVGLWAARDWGEGRMGSAFLNPIHFGDIALILGVLSALSI
HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHC
NWWRKDPLAVRLLKVGGLLAGLVASLLTGSRGGWVALPFILLLVAVARGRDKPARWRVLV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHH
PAVAVLGVVVLYAVSGTIHERIHMVWVDLAQYAQGQKDTSIGIRLQIYQAALMLIPKHPI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCCCCCC
FGLGPGGFADSLQALVDAGRMSATAAQLGRGEAHNQLLAYTANFGLVGGLSIVAIHLVPG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
LLCWRCLKAAAAPMRRAALMGAVFALAFFVFGLTVEIFTLKMTASFYAAVIASLAGIASH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TGPASEAGTSSLTER
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]