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The map label for this gene is 17546887

Identifier: 17546887

GI number: 17546887

Start: 2351266

End: 2351985

Strand: Reverse

Name: 17546887

Synonym: RSc2168

Alternate gene names: NA

Gene position: 2351985-2351266 (Counterclockwise)

Preceding gene: 17546888

Following gene: 17546886

Centisome position: 63.29

GC content: 69.58

Gene sequence:

>720_bases
ATGGATACGGCAGTGAATCTATGGCCGCTGATCGGGGTGGTCGTCATCATCGCGGGGTTCATCCTGCGGTTCAATCCGAT
GCTGGTGGTGGCCGTGGCCGCCATCGCCACCGGTTTCGCGGCGTCGATGCCGATCGACAGGATCCTGACGGCGATCGGCA
CGGGCGTCATCAAGACGCGCACGCTGCCGCTCATCATCCTGATGCCGCTGGCGGTGGTGGGCCTGCTTGAGCGGCATGGC
CTGCGCGAGCACGCGCAGAACTGGATCGCGCGCATCCGCTCGGCCACGGTCGGCCGCCTGCTGATCGTCTACCTGGCAGT
GCGCGAGCTGACCGCGGCCGCCGGCCTGACCAGCCTCGGCGGCCATCCGCAGATGGTGCGCCCGCTGCTGGCCCCGATGG
CCGAGGGCGCCGCGGAGAGCCGCTTCGGCAAGCTGCCCGAGCCGATCCGCGAACGCCTGCTGGCCTTCTGCGCCGCCACC
GACAACGTCGGCCTGTTCTTCGGCGAGGACATCTTCGTGGCCTTCGGCGCCATCGCGCTGATGCATACCTTCCTGCTGGG
CTCGGGCATCGACGTCGAGCCGCTGCGCATCGCCGTGTGGGGCATTCCCACCGCGATCTGCGCGTTCCTGATCCACGCCG
TGCGCCTCAAGCGCCTGGACGGCTGGCTCGCCCGCGAGATGGGCGCCGTCGGCACCGTAGCCGCAGCCAAGCAGGGGTGA

Upstream 100 bases:

>100_bases
GGCAGCGAGGGCATCGCTGTGCGCGCCGGCGCCTGAAACCTGCCCCGCACGGTGGTTCGCGCGGGGCTTTTTTTCACAAC
AAGAAGGGGGGAAGTTCCAC

Downstream 100 bases:

>100_bases
GCACCATGATTCTGTCGATCAACTATCTGTACTGGCTGGCCGGGATCGTCCTGACGATCACCGCGCTGATGACCTTCGCC
GACAAGACGCACCCGCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MDTAVNLWPLIGVVVIIAGFILRFNPMLVVAVAAIATGFAASMPIDRILTAIGTGVIKTRTLPLIILMPLAVVGLLERHG
LREHAQNWIARIRSATVGRLLIVYLAVRELTAAAGLTSLGGHPQMVRPLLAPMAEGAAESRFGKLPEPIRERLLAFCAAT
DNVGLFFGEDIFVAFGAIALMHTFLLGSGIDVEPLRIAVWGIPTAICAFLIHAVRLKRLDGWLAREMGAVGTVAAAKQG

Sequences:

>Translated_239_residues
MDTAVNLWPLIGVVVIIAGFILRFNPMLVVAVAAIATGFAASMPIDRILTAIGTGVIKTRTLPLIILMPLAVVGLLERHG
LREHAQNWIARIRSATVGRLLIVYLAVRELTAAAGLTSLGGHPQMVRPLLAPMAEGAAESRFGKLPEPIRERLLAFCAAT
DNVGLFFGEDIFVAFGAIALMHTFLLGSGIDVEPLRIAVWGIPTAICAFLIHAVRLKRLDGWLAREMGAVGTVAAAKQG
>Mature_239_residues
MDTAVNLWPLIGVVVIIAGFILRFNPMLVVAVAAIATGFAASMPIDRILTAIGTGVIKTRTLPLIILMPLAVVGLLERHG
LREHAQNWIARIRSATVGRLLIVYLAVRELTAAAGLTSLGGHPQMVRPLLAPMAEGAAESRFGKLPEPIRERLLAFCAAT
DNVGLFFGEDIFVAFGAIALMHTFLLGSGIDVEPLRIAVWGIPTAICAFLIHAVRLKRLDGWLAREMGAVGTVAAAKQG

Specific function: Unknown

COG id: COG3819

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25456; Mature: 25456

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTAVNLWPLIGVVVIIAGFILRFNPMLVVAVAAIATGFAASMPIDRILTAIGTGVIKTR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHH
TLPLIILMPLAVVGLLERHGLREHAQNWIARIRSATVGRLLIVYLAVRELTAAAGLTSLG
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GHPQMVRPLLAPMAEGAAESRFGKLPEPIRERLLAFCAATDNVGLFFGEDIFVAFGAIAL
CCHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHH
MHTFLLGSGIDVEPLRIAVWGIPTAICAFLIHAVRLKRLDGWLAREMGAVGTVAAAKQG
HHHHHHCCCCCCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC
>Mature Secondary Structure
MDTAVNLWPLIGVVVIIAGFILRFNPMLVVAVAAIATGFAASMPIDRILTAIGTGVIKTR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHH
TLPLIILMPLAVVGLLERHGLREHAQNWIARIRSATVGRLLIVYLAVRELTAAAGLTSLG
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GHPQMVRPLLAPMAEGAAESRFGKLPEPIRERLLAFCAATDNVGLFFGEDIFVAFGAIAL
CCHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHH
MHTFLLGSGIDVEPLRIAVWGIPTAICAFLIHAVRLKRLDGWLAREMGAVGTVAAAKQG
HHHHHHCCCCCCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA