| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17546811
Identifier: 17546811
GI number: 17546811
Start: 2264082
End: 2265182
Strand: Reverse
Name: 17546811
Synonym: RSc2092
Alternate gene names: NA
Gene position: 2265182-2264082 (Counterclockwise)
Preceding gene: 17546813
Following gene: 17546810
Centisome position: 60.95
GC content: 70.94
Gene sequence:
>1101_bases ATGACATTCCAGTTCGATGTGTTTCCGGTGGTCGGGCCGGACGACAATCCCAGGGCCAACGGCAAGGTGTTCCAGCTGCT GCGCGCGGTGCGCGAAACCGGCTCGCTGCACCGCGCGGCCAAGCAGATCGGCCTGTCCTATCGCCACGCATGGGGCGTGA TGCGCGGATGGGAAGACATGCTCGGGCGGACGCTGCTCGACATGGAGCGCGGGCGCGGCGCCTCGCTCACCCTGTTCGGC GAGCGCATGCTGCGCGCGGAGATGCGGCTGCACGAGCAGATCGATCCGCTGTTGCGGCAGGCAACGGGACAGTTCCTGTC GGAACTGGAAGACGCCGCGCAGCCGCAGGCGCGCATCCGCTTTTCCGGCAGCCATGACCCGGCGGTCGAAGTGCTGGCGC AGGTCTTTGCCGGCCAGGCCGACGCCGCGAACCTGGACACGGTGTTTTGCAGCGCCGTCGAGGGCCTGATCTGCCTGCAG GAAAAGCAGTGCGAGGTGGCCGGCTTCTACGTGGCGCCGCAGCAGGGCAGCGGCTCGATCGCGCACCAGACCCTGCGCAA GTGGCTGCGGCCCACCGCGGTGCGGCTGATCGCGCTGGCCGACCGGGAGCAGGGGCTGATGATGTCGGCGCAGTGGGCCG GGCGCGTGCAGTCGCTGACCGACCTGGTGCGCACCCGCGCCCGCTTCATCAACCGCCAGCGCAGTTCCGGCACGCGCCTG CTGTTCGACCAGCTGCTGGTGGCCGAGGGCCTGTACCCCGACCAGATCCACGGCTATGACGAGCAGGAATTCTCCAGCGA CAAGGTCGCGGAAGCGGTGCAGGCGGGCCGCGCCGACGTCGGCTTCGGCCTGCGCCCGGGCGCCGAAGCGCACGGCCTGC ACTTCGTGCCGCTCACGCGCGAGACGTACTACCTCGCGGTGCGCCGCAACGACGCCATGGCGCCCTGGGTGCGCGAGCTG ACCGAGCGCATCGGCTCGCCCGCCTTCCGCGCAGGACTGGACCACCTGGCCGGCTACCGCGCCCCCGAGCACGTCGTGCT GACGACCGCCGAACAGGCGCTGCCCTGGCACGCCGACGAGCCCCGGGCGGCCGCGCGGTAA
Upstream 100 bases:
>100_bases ATGCTGCATGATGTCGGCGTGCGGCGGCCAGAACGCCCACCGGAAACGGTTGGATTGTTCCCGCGCCTTTCGGGGAAGTA AATAGGAAACCAATAACATA
Downstream 100 bases:
>100_bases CTCGTGCGAACATGGCGGGTATCGCGCGGGCCCGCGCTTTCTACCCGTCCTGTCCATGTCCCGTTTTTCCATCACCGCCC AGTCGCTGCGCATGCTGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MTFQFDVFPVVGPDDNPRANGKVFQLLRAVRETGSLHRAAKQIGLSYRHAWGVMRGWEDMLGRTLLDMERGRGASLTLFG ERMLRAEMRLHEQIDPLLRQATGQFLSELEDAAQPQARIRFSGSHDPAVEVLAQVFAGQADAANLDTVFCSAVEGLICLQ EKQCEVAGFYVAPQQGSGSIAHQTLRKWLRPTAVRLIALADREQGLMMSAQWAGRVQSLTDLVRTRARFINRQRSSGTRL LFDQLLVAEGLYPDQIHGYDEQEFSSDKVAEAVQAGRADVGFGLRPGAEAHGLHFVPLTRETYYLAVRRNDAMAPWVREL TERIGSPAFRAGLDHLAGYRAPEHVVLTTAEQALPWHADEPRAAAR
Sequences:
>Translated_366_residues MTFQFDVFPVVGPDDNPRANGKVFQLLRAVRETGSLHRAAKQIGLSYRHAWGVMRGWEDMLGRTLLDMERGRGASLTLFG ERMLRAEMRLHEQIDPLLRQATGQFLSELEDAAQPQARIRFSGSHDPAVEVLAQVFAGQADAANLDTVFCSAVEGLICLQ EKQCEVAGFYVAPQQGSGSIAHQTLRKWLRPTAVRLIALADREQGLMMSAQWAGRVQSLTDLVRTRARFINRQRSSGTRL LFDQLLVAEGLYPDQIHGYDEQEFSSDKVAEAVQAGRADVGFGLRPGAEAHGLHFVPLTRETYYLAVRRNDAMAPWVREL TERIGSPAFRAGLDHLAGYRAPEHVVLTTAEQALPWHADEPRAAAR >Mature_365_residues TFQFDVFPVVGPDDNPRANGKVFQLLRAVRETGSLHRAAKQIGLSYRHAWGVMRGWEDMLGRTLLDMERGRGASLTLFGE RMLRAEMRLHEQIDPLLRQATGQFLSELEDAAQPQARIRFSGSHDPAVEVLAQVFAGQADAANLDTVFCSAVEGLICLQE KQCEVAGFYVAPQQGSGSIAHQTLRKWLRPTAVRLIALADREQGLMMSAQWAGRVQSLTDLVRTRARFINRQRSSGTRLL FDQLLVAEGLYPDQIHGYDEQEFSSDKVAEAVQAGRADVGFGLRPGAEAHGLHFVPLTRETYYLAVRRNDAMAPWVRELT ERIGSPAFRAGLDHLAGYRAPEHVVLTTAEQALPWHADEPRAAAR
Specific function: Unknown
COG id: COG1910
COG function: function code P; Periplasmic molybdate-binding protein/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moeA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020817 - InterPro: IPR008284 - InterPro: IPR005111 - InterPro: IPR005110 - InterPro: IPR001453 [H]
Pfam domain/function: PF00994 MoCF_biosynth; PF03454 MoeA_C; PF03453 MoeA_N [H]
EC number: NA
Molecular weight: Translated: 40738; Mature: 40607
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFQFDVFPVVGPDDNPRANGKVFQLLRAVRETGSLHRAAKQIGLSYRHAWGVMRGWEDM CCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LGRTLLDMERGRGASLTLFGERMLRAEMRLHEQIDPLLRQATGQFLSELEDAAQPQARIR HHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE FSGSHDPAVEVLAQVFAGQADAANLDTVFCSAVEGLICLQEKQCEVAGFYVAPQQGSGSI ECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHH AHQTLRKWLRPTAVRLIALADREQGLMMSAQWAGRVQSLTDLVRTRARFINRQRSSGTRL HHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LFDQLLVAEGLYPDQIHGYDEQEFSSDKVAEAVQAGRADVGFGLRPGAEAHGLHFVPLTR HHHHHHHHCCCCCHHCCCCCHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECC ETYYLAVRRNDAMAPWVRELTERIGSPAFRAGLDHLAGYRAPEHVVLTTAEQALPWHADE CEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEHHHHCCCCCCC PRAAAR CCCCCC >Mature Secondary Structure TFQFDVFPVVGPDDNPRANGKVFQLLRAVRETGSLHRAAKQIGLSYRHAWGVMRGWEDM CEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LGRTLLDMERGRGASLTLFGERMLRAEMRLHEQIDPLLRQATGQFLSELEDAAQPQARIR HHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE FSGSHDPAVEVLAQVFAGQADAANLDTVFCSAVEGLICLQEKQCEVAGFYVAPQQGSGSI ECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHH AHQTLRKWLRPTAVRLIALADREQGLMMSAQWAGRVQSLTDLVRTRARFINRQRSSGTRL HHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LFDQLLVAEGLYPDQIHGYDEQEFSSDKVAEAVQAGRADVGFGLRPGAEAHGLHFVPLTR HHHHHHHHCCCCCHHCCCCCHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECC ETYYLAVRRNDAMAPWVRELTERIGSPAFRAGLDHLAGYRAPEHVVLTTAEQALPWHADE CEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEHHHHCCCCCCC PRAAAR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]