| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is ilvI [H]
Identifier: 17546796
GI number: 17546796
Start: 2249827
End: 2251584
Strand: Reverse
Name: ilvI [H]
Synonym: RSc2077
Alternate gene names: 17546796
Gene position: 2251584-2249827 (Counterclockwise)
Preceding gene: 17546808
Following gene: 17546795
Centisome position: 60.58
GC content: 63.48
Gene sequence:
>1758_bases ATGAATATGCCAAGCGCGGAATTTTCCCACGCCAATAGCGGTTCACCTGCCGAAATGATGGGGTCTGACATCCTCGTCAA TGCGCTCGCGGCAGAAGGCGTCGAGTTCGTCTGGGGTTACCCGGGCGGCGCGGTGCTCTATATCTACGACGCGTTCTACA AGCAGAACAAGATCGAACACATCCTGGTGCGCCACGAGCAGGCGGCGGTCCATGCGGCCGACGGCTATGCGCGCGCCACG GGCAAGGTCGGGGTCGCCCTGGTGACGTCCGGCCCGGGCGTGACCAATGCCGTGACCGGCATCGCCACCGCCTACCTGGA TTCGATCCCGATGGTGATCATCACCGGCAACGTGCCGACGCACGCCATCGGCCAGGACGCCTTCCAGGAATGCGACACCG TCGGCATCACGCGCCCGATCGTCAAGCACAACTTCCTGGTCAAGGACGTGCGCAACCTCGCTTCGACCATCAAGAAGGCG TTCTACATCGCCTCGACCGGCCGTCCGGGTCCGGTGGTGGTGGACATCCCGAAGGATGTCTCGCGCGAGCTGTGCAAGTA CGAGTATCCGAAGACCATCGAGATGCGCTCGTACAACCCGGTCAACAAGGGCCACTCCGGCCAGATCCGCAAGGCCGTGA GCCTGCTGCTGCAGGCCGAGCGTCCGTACATCTACACCGGCGGCGGGGTGGTGCTGGCCAATGCCAGCGAAGAGCTGCGC CAGCTGGCGGCCCTCACCGGCTACCCGGTGACGAACACGCTGATGGGTCTGGGCGCCTTCCCCGGCGCCAGCAAGCAGTT CCTCGGCATGCTGGGCATGCATGGCACGTACGAAGCCAACATGGCCATGCAGCACTGCGACGTGCTGATCGCCGTCGGCG CGCGCTTCGATGACCGCGTGATCGGCAGCCCGGCGCACTTCGCCTCGCAGCCGCGCAAGATCATCCACATCGACATCGAT CCGTCGTCCATTTCCAAGCGGGTCAAGGTGGACATCCCCATCGTCGGCAACGTCAAGGACGTGCTGCAGGAGATGATCGC CCAGATCCAGGCGGGCGAGGCCAAGCCGAACAAGACGGCGCTCGCCAAGTGGTGGGAGCAGATCGAGCAGTGGCGCAGCG TCGACTGCCTGAAGTACGACCGCACCTCCGAGATCATCAAGCCGCAGTACGTGGTCGAGAAGATCTGGGAACTGACCGCG GGCGATGCCTTCGTCTGTTCCGACGTGGGCCAGCACCAGATGTGGGCCGCGCAGTTCTACAAGTTCAACGAGCCGCGCCG CTGGATCAACTCCGGCGGTCTGGGCACGATGGGCGTGGGCCTGCCGTATGCCATGGGCGTCAAGAAGGCGTTCCCGGACA AGGAGGTCGTCACCATCACCGGTGAGGGCTCGATCCAGATGTGCATCCAGGAACTCTCCACCTGTCTGCAGTACGACACG CCGGTGAAGATCTGCTCGCTCAACAACGGCTACCTGGGCATGGTGCGCCAGTGGCAGGAGATCGAGTACGACAACCGTTA TTCGCACTCCTACATGCAGGCGCTGCCTGACTTCGTGAAGCTGGCCGAAGCGTATGGCCACGTGGGCATGCGGATCGAAA AGACCGCCGATGTCGAGCCCGCGCTGCGCGAAGCCTTCCGACTCAAGGACCGCACCGTGTTCCTCGACTTCCAGACCGAC CCGACCGAAAACGTCTGGCCGATGGTCCAGGCAGGCAAGGGCATCTCTGAAATGCTGCTCGGCGCGGAGGATCTGTAA
Upstream 100 bases:
>100_bases CAGGCGGCCATCCATGCAGACGCGCACCGCTCGAACCCGCGCCACAAGCCCGGTAGAGAGCATCCAAACAATTTTTTGCC GAAAATTGCAAAGGACTGAC
Downstream 100 bases:
>100_bases TGCGCCACATCATTTCCGTCCTGCTGGAAAACGAACCGGGCGCGCTGTCGCGCGTGGTGGGCCTGTTCTCGGCGCGCGGC TACAACATCGAGACGCTGAC
Product: acetolactate synthase 3 catalytic subunit
Products: NA
Alternate protein names: AHAS; Acetohydroxy-acid synthase large subunit; ALS [H]
Number of amino acids: Translated: 585; Mature: 585
Protein sequence:
>585_residues MNMPSAEFSHANSGSPAEMMGSDILVNALAAEGVEFVWGYPGGAVLYIYDAFYKQNKIEHILVRHEQAAVHAADGYARAT GKVGVALVTSGPGVTNAVTGIATAYLDSIPMVIITGNVPTHAIGQDAFQECDTVGITRPIVKHNFLVKDVRNLASTIKKA FYIASTGRPGPVVVDIPKDVSRELCKYEYPKTIEMRSYNPVNKGHSGQIRKAVSLLLQAERPYIYTGGGVVLANASEELR QLAALTGYPVTNTLMGLGAFPGASKQFLGMLGMHGTYEANMAMQHCDVLIAVGARFDDRVIGSPAHFASQPRKIIHIDID PSSISKRVKVDIPIVGNVKDVLQEMIAQIQAGEAKPNKTALAKWWEQIEQWRSVDCLKYDRTSEIIKPQYVVEKIWELTA GDAFVCSDVGQHQMWAAQFYKFNEPRRWINSGGLGTMGVGLPYAMGVKKAFPDKEVVTITGEGSIQMCIQELSTCLQYDT PVKICSLNNGYLGMVRQWQEIEYDNRYSHSYMQALPDFVKLAEAYGHVGMRIEKTADVEPALREAFRLKDRTVFLDFQTD PTENVWPMVQAGKGISEMLLGAEDL
Sequences:
>Translated_585_residues MNMPSAEFSHANSGSPAEMMGSDILVNALAAEGVEFVWGYPGGAVLYIYDAFYKQNKIEHILVRHEQAAVHAADGYARAT GKVGVALVTSGPGVTNAVTGIATAYLDSIPMVIITGNVPTHAIGQDAFQECDTVGITRPIVKHNFLVKDVRNLASTIKKA FYIASTGRPGPVVVDIPKDVSRELCKYEYPKTIEMRSYNPVNKGHSGQIRKAVSLLLQAERPYIYTGGGVVLANASEELR QLAALTGYPVTNTLMGLGAFPGASKQFLGMLGMHGTYEANMAMQHCDVLIAVGARFDDRVIGSPAHFASQPRKIIHIDID PSSISKRVKVDIPIVGNVKDVLQEMIAQIQAGEAKPNKTALAKWWEQIEQWRSVDCLKYDRTSEIIKPQYVVEKIWELTA GDAFVCSDVGQHQMWAAQFYKFNEPRRWINSGGLGTMGVGLPYAMGVKKAFPDKEVVTITGEGSIQMCIQELSTCLQYDT PVKICSLNNGYLGMVRQWQEIEYDNRYSHSYMQALPDFVKLAEAYGHVGMRIEKTADVEPALREAFRLKDRTVFLDFQTD PTENVWPMVQAGKGISEMLLGAEDL >Mature_585_residues MNMPSAEFSHANSGSPAEMMGSDILVNALAAEGVEFVWGYPGGAVLYIYDAFYKQNKIEHILVRHEQAAVHAADGYARAT GKVGVALVTSGPGVTNAVTGIATAYLDSIPMVIITGNVPTHAIGQDAFQECDTVGITRPIVKHNFLVKDVRNLASTIKKA FYIASTGRPGPVVVDIPKDVSRELCKYEYPKTIEMRSYNPVNKGHSGQIRKAVSLLLQAERPYIYTGGGVVLANASEELR QLAALTGYPVTNTLMGLGAFPGASKQFLGMLGMHGTYEANMAMQHCDVLIAVGARFDDRVIGSPAHFASQPRKIIHIDID PSSISKRVKVDIPIVGNVKDVLQEMIAQIQAGEAKPNKTALAKWWEQIEQWRSVDCLKYDRTSEIIKPQYVVEKIWELTA GDAFVCSDVGQHQMWAAQFYKFNEPRRWINSGGLGTMGVGLPYAMGVKKAFPDKEVVTITGEGSIQMCIQELSTCLQYDT PVKICSLNNGYLGMVRQWQEIEYDNRYSHSYMQALPDFVKLAEAYGHVGMRIEKTADVEPALREAFRLKDRTVFLDFQTD PTENVWPMVQAGKGISEMLLGAEDL
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=581, Percent_Identity=25.3012048192771, Blast_Score=173, Evalue=5e-43, Organism=Homo sapiens, GI21361361, Length=512, Percent_Identity=26.3671875, Blast_Score=156, Evalue=6e-38, Organism=Escherichia coli, GI87081685, Length=568, Percent_Identity=56.6901408450704, Blast_Score=675, Evalue=0.0, Organism=Escherichia coli, GI1790104, Length=571, Percent_Identity=39.2294220665499, Blast_Score=402, Evalue=1e-113, Organism=Escherichia coli, GI1786717, Length=541, Percent_Identity=34.3807763401109, Blast_Score=305, Evalue=5e-84, Organism=Escherichia coli, GI1787096, Length=565, Percent_Identity=28.4955752212389, Blast_Score=203, Evalue=2e-53, Organism=Escherichia coli, GI1788716, Length=555, Percent_Identity=25.2252252252252, Blast_Score=143, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17531299, Length=552, Percent_Identity=25.9057971014493, Blast_Score=158, Evalue=7e-39, Organism=Caenorhabditis elegans, GI17531301, Length=552, Percent_Identity=25.9057971014493, Blast_Score=158, Evalue=9e-39, Organism=Caenorhabditis elegans, GI17542570, Length=511, Percent_Identity=26.027397260274, Blast_Score=151, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6323755, Length=583, Percent_Identity=42.7101200686106, Blast_Score=444, Evalue=1e-125, Organism=Saccharomyces cerevisiae, GI6320816, Length=495, Percent_Identity=24.040404040404, Blast_Score=111, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6320123, Length=511, Percent_Identity=21.3307240704501, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6323163, Length=532, Percent_Identity=21.9924812030075, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI19922626, Length=572, Percent_Identity=25.6993006993007, Blast_Score=177, Evalue=2e-44,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 64383; Mature: 64383
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMPSAEFSHANSGSPAEMMGSDILVNALAAEGVEFVWGYPGGAVLYIYDAFYKQNKIEH CCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCEEEEECCCCEEEEEEEHHHHCCCHHH ILVRHEQAAVHAADGYARATGKVGVALVTSGPGVTNAVTGIATAYLDSIPMVIITGNVPT HEEECHHHHEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC HAIGQDAFQECDTVGITRPIVKHNFLVKDVRNLASTIKKAFYIASTGRPGPVVVDIPKDV CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEECCHHH SRELCKYEYPKTIEMRSYNPVNKGHSGQIRKAVSLLLQAERPYIYTGGGVVLANASEELR HHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCEEEECCHHHHH QLAALTGYPVTNTLMGLGAFPGASKQFLGMLGMHGTYEANMAMQHCDVLIAVGARFDDRV HHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCEEEEECCCCCCCC IGSPAHFASQPRKIIHIDIDPSSISKRVKVDIPIVGNVKDVLQEMIAQIQAGEAKPNKTA CCCCHHHHCCCCEEEEEEECHHHHCCEEEEEEEEECCHHHHHHHHHHHHHCCCCCCCHHH LAKWWEQIEQWRSVDCLKYDRTSEIIKPQYVVEKIWELTAGDAFVCSDVGQHQMWAAQFY HHHHHHHHHHHCCCCCEEECCCHHHCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH KFNEPRRWINSGGLGTMGVGLPYAMGVKKAFPDKEVVTITGEGSIQMCIQELSTCLQYDT HCCCCHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCC PVKICSLNNGYLGMVRQWQEIEYDNRYSHSYMQALPDFVKLAEAYGHVGMRIEKTADVEP CEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCH ALREAFRLKDRTVFLDFQTDPTENVWPMVQAGKGISEMLLGAEDL HHHHHHHCCCCEEEEEECCCCCCCCCHHHHCCCCHHHHHCCCCCC >Mature Secondary Structure MNMPSAEFSHANSGSPAEMMGSDILVNALAAEGVEFVWGYPGGAVLYIYDAFYKQNKIEH CCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCEEEEECCCCEEEEEEEHHHHCCCHHH ILVRHEQAAVHAADGYARATGKVGVALVTSGPGVTNAVTGIATAYLDSIPMVIITGNVPT HEEECHHHHEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC HAIGQDAFQECDTVGITRPIVKHNFLVKDVRNLASTIKKAFYIASTGRPGPVVVDIPKDV CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEECCHHH SRELCKYEYPKTIEMRSYNPVNKGHSGQIRKAVSLLLQAERPYIYTGGGVVLANASEELR HHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCEEEECCHHHHH QLAALTGYPVTNTLMGLGAFPGASKQFLGMLGMHGTYEANMAMQHCDVLIAVGARFDDRV HHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCEEEEECCCCCCCC IGSPAHFASQPRKIIHIDIDPSSISKRVKVDIPIVGNVKDVLQEMIAQIQAGEAKPNKTA CCCCHHHHCCCCEEEEEEECHHHHCCEEEEEEEEECCHHHHHHHHHHHHHCCCCCCCHHH LAKWWEQIEQWRSVDCLKYDRTSEIIKPQYVVEKIWELTAGDAFVCSDVGQHQMWAAQFY HHHHHHHHHHHCCCCCEEECCCHHHCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH KFNEPRRWINSGGLGTMGVGLPYAMGVKKAFPDKEVVTITGEGSIQMCIQELSTCLQYDT HCCCCHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCC PVKICSLNNGYLGMVRQWQEIEYDNRYSHSYMQALPDFVKLAEAYGHVGMRIEKTADVEP CEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCH ALREAFRLKDRTVFLDFQTDPTENVWPMVQAGKGISEMLLGAEDL HHHHHHHCCCCEEEEEECCCCCCCCCHHHHCCCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]